EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000010948 (Gene tree)
Gene ID: 102349730
Gene Symbol: -
Alias: -
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 61256 bases
Position: chrJH126894.1:550326-611581
Accession: 102349730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012428	zf-RanBP	PF00641.18	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012521	-	2064	XM_005996783	ENSLACP00000012428	681 (aa)	XP_005996845	H3AS07

Gene Model

Click here to download ENSLACG00000010948's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm04217	Necroptosis	KEGG
lcm04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010948	-	56	46.684	ENSAPOG00000023352	sharpin	87	46.684	Acanthochromis_polyacanthus
ENSLACG00000010948	-	97	53.198	ENSAPOG00000022737	shrprbck1r	95	53.198	Acanthochromis_polyacanthus
ENSLACG00000010948	-	97	53.207	ENSACIG00000002184	shrprbck1r	95	52.915	Amphilophus_citrinellus
ENSLACG00000010948	-	97	53.712	ENSAOCG00000002890	shrprbck1r	95	53.712	Amphiprion_ocellaris
ENSLACG00000010948	-	56	46.939	ENSAOCG00000017464	sharpin	87	46.939	Amphiprion_ocellaris
ENSLACG00000010948	-	97	53.198	ENSAPEG00000023274	shrprbck1r	95	53.198	Amphiprion_percula
ENSLACG00000010948	-	56	46.939	ENSAPEG00000004049	sharpin	87	46.939	Amphiprion_percula
ENSLACG00000010948	-	98	52.230	ENSATEG00000014561	shrprbck1r	96	52.326	Anabas_testudineus
ENSLACG00000010948	-	57	47.194	ENSATEG00000007832	sharpin	80	47.194	Anabas_testudineus
ENSLACG00000010948	-	97	52.624	ENSACLG00000022609	shrprbck1r	95	52.915	Astatotilapia_calliptera
ENSLACG00000010948	-	98	52.282	ENSAMXG00000021016	shrprbck1r	96	53.429	Astyanax_mexicanus
ENSLACG00000010948	-	57	47.619	ENSAMXG00000006229	sharpin	97	47.619	Astyanax_mexicanus
ENSLACG00000010948	-	96	51.749	ENSCSEG00000011306	shrprbck1r	95	51.895	Cynoglossus_semilaevis
ENSLACG00000010948	-	58	45.320	ENSCVAG00000006586	sharpin	90	45.320	Cyprinodon_variegatus
ENSLACG00000010948	-	98	51.617	ENSCVAG00000007250	shrprbck1r	96	52.770	Cyprinodon_variegatus
ENSLACG00000010948	-	57	46.465	ENSDARG00000076995	sharpin	94	46.465	Danio_rerio
ENSLACG00000010948	-	96	53.079	ENSDARG00000059871	shrprbck1r	95	53.079	Danio_rerio
ENSLACG00000010948	-	97	53.959	ENSELUG00000016022	shrprbck1r	96	53.947	Esox_lucius
ENSLACG00000010948	-	58	45.274	ENSFHEG00000013564	sharpin	90	45.274	Fundulus_heteroclitus
ENSLACG00000010948	-	56	38.182	ENSGAFG00000021405	sharpin	85	38.182	Gambusia_affinis
ENSLACG00000010948	-	97	52.624	ENSGAFG00000009309	shrprbck1r	95	52.624	Gambusia_affinis
ENSLACG00000010948	-	76	52.593	ENSGACG00000002544	shrprbck1r	99	52.985	Gasterosteus_aculeatus
ENSLACG00000010948	-	97	53.061	ENSHBUG00000021933	shrprbck1r	95	53.061	Haplochromis_burtoni
ENSLACG00000010948	-	60	44.608	ENSHCOG00000018847	sharpin	78	45.098	Hippocampus_comes
ENSLACG00000010948	-	57	45.244	ENSIPUG00000011951	sharpin	87	92.593	Ictalurus_punctatus
ENSLACG00000010948	-	97	53.790	ENSIPUG00000014247	shrprbck1r	95	53.790	Ictalurus_punctatus
ENSLACG00000010948	-	97	52.237	ENSKMAG00000015215	shrprbck1r	95	52.670	Kryptolebias_marmoratus
ENSLACG00000010948	-	57	47.089	ENSKMAG00000015204	sharpin	79	43.874	Kryptolebias_marmoratus
ENSLACG00000010948	-	97	53.207	ENSLBEG00000016876	shrprbck1r	95	53.353	Labrus_bergylta
ENSLACG00000010948	-	57	47.716	ENSLBEG00000016624	sharpin	88	47.716	Labrus_bergylta
ENSLACG00000010948	-	98	55.903	ENSLOCG00000008910	shrprbck1r	97	55.556	Lepisosteus_oculatus
ENSLACG00000010948	-	97	52.111	ENSMAMG00000022930	shrprbck1r	95	52.111	Mastacembelus_armatus
ENSLACG00000010948	-	97	52.478	ENSMZEG00005021257	shrprbck1r	95	52.770	Maylandia_zebra
ENSLACG00000010948	-	97	51.674	ENSMMOG00000003764	shrprbck1r	97	51.140	Mola_mola
ENSLACG00000010948	-	97	52.915	ENSMALG00000008861	shrprbck1r	95	52.915	Monopterus_albus
ENSLACG00000010948	-	97	52.478	ENSNBRG00000002270	shrprbck1r	95	52.770	Neolamprologus_brichardi
ENSLACG00000010948	-	98	52.374	ENSONIG00000014401	shrprbck1r	95	52.915	Oreochromis_niloticus
ENSLACG00000010948	-	56	43.564	ENSONIG00000009626	-	97	45.643	Oreochromis_niloticus
ENSLACG00000010948	-	97	52.847	ENSORLG00000007392	shrprbck1r	95	52.847	Oryzias_latipes
ENSLACG00000010948	-	56	47.236	ENSORLG00000017281	sharpin	86	47.236	Oryzias_latipes
ENSLACG00000010948	-	59	45.602	ENSORLG00020000801	sharpin	86	47.487	Oryzias_latipes_hni
ENSLACG00000010948	-	97	52.847	ENSORLG00020018619	shrprbck1r	95	52.847	Oryzias_latipes_hni
ENSLACG00000010948	-	59	45.602	ENSORLG00015009860	sharpin	86	47.487	Oryzias_latipes_hsok
ENSLACG00000010948	-	97	53.079	ENSORLG00015018865	shrprbck1r	95	53.079	Oryzias_latipes_hsok
ENSLACG00000010948	-	97	53.285	ENSOMEG00000012749	shrprbck1r	95	53.285	Oryzias_melastigma
ENSLACG00000010948	-	96	55.786	ENSPKIG00000006933	shrprbck1r	95	55.786	Paramormyrops_kingsleyae
ENSLACG00000010948	-	62	48.478	ENSPKIG00000018308	-	88	49.180	Paramormyrops_kingsleyae
ENSLACG00000010948	-	96	52.889	ENSPMGG00000013254	shrprbck1r	95	52.889	Periophthalmus_magnuspinnatus
ENSLACG00000010948	-	97	53.411	ENSPFOG00000004214	shrprbck1r	95	53.411	Poecilia_formosa
ENSLACG00000010948	-	58	45.567	ENSPFOG00000015253	sharpin	90	45.567	Poecilia_formosa
ENSLACG00000010948	-	97	53.061	ENSPLAG00000020523	shrprbck1r	95	53.061	Poecilia_latipinna
ENSLACG00000010948	-	58	45.813	ENSPLAG00000000423	sharpin	90	45.813	Poecilia_latipinna
ENSLACG00000010948	-	50	44.813	ENSPMEG00000023030	sharpin	57	44.813	Poecilia_mexicana
ENSLACG00000010948	-	97	53.207	ENSPMEG00000006877	shrprbck1r	95	53.207	Poecilia_mexicana
ENSLACG00000010948	-	97	52.907	ENSPREG00000014689	shrprbck1r	95	52.907	Poecilia_reticulata
ENSLACG00000010948	-	58	46.040	ENSPREG00000009702	sharpin	90	46.040	Poecilia_reticulata
ENSLACG00000010948	-	97	52.915	ENSPNYG00000022601	shrprbck1r	95	53.207	Pundamilia_nyererei
ENSLACG00000010948	-	97	53.768	ENSPNAG00000007847	shrprbck1r	96	53.768	Pygocentrus_nattereri
ENSLACG00000010948	-	57	45.455	ENSPNAG00000002911	sharpin	99	45.707	Pygocentrus_nattereri
ENSLACG00000010948	-	76	50.185	ENSSFOG00015014150	-	98	50.185	Scleropages_formosus
ENSLACG00000010948	-	62	42.241	ENSSFOG00015004028	sharpin	91	43.601	Scleropages_formosus
ENSLACG00000010948	-	99	51.690	ENSSMAG00000018085	shrprbck1r	96	52.080	Scophthalmus_maximus
ENSLACG00000010948	-	97	52.984	ENSSDUG00000002959	shrprbck1r	95	52.984	Seriola_dumerili
ENSLACG00000010948	-	57	38.579	ENSSDUG00000019039	sharpin	87	38.579	Seriola_dumerili
ENSLACG00000010948	-	97	53.130	ENSSLDG00000009026	shrprbck1r	95	53.130	Seriola_lalandi_dorsalis
ENSLACG00000010948	-	91	52.851	ENSSPAG00000016097	shrprbck1r	92	52.851	Stegastes_partitus
ENSLACG00000010948	-	97	51.965	ENSTRUG00000006949	shrprbck1r	95	52.256	Takifugu_rubripes
ENSLACG00000010948	-	56	43.117	ENSTRUG00000011046	sharpin	86	43.117	Takifugu_rubripes
ENSLACG00000010948	-	56	43.939	ENSTNIG00000008521	sharpin	93	43.434	Tetraodon_nigroviridis
ENSLACG00000010948	-	97	51.674	ENSXCOG00000006701	shrprbck1r	95	51.375	Xiphophorus_couchianus
ENSLACG00000010948	-	58	46.059	ENSXMAG00000022076	sharpin	90	46.059	Xiphophorus_maculatus
ENSLACG00000010948	-	97	51.520	ENSXMAG00000018972	shrprbck1r	95	51.520	Xiphophorus_maculatus