EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010998 (Gene tree)
Gene ID: 106704445
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 522 bases
Position: chrJH127229.1:556287-556808
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012482	S10_plectin	PF03501.15	4.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012575	-	522	-	ENSLACP00000012482	174 (aa)	-	H3AS61

Gene Model

Click here to download ENSLACG00000010998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010998	-	83	52.740	ENSLACG00000017219	rps10	78	52.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010998	-	76	62.121	ENSAPOG00000014059	-	90	62.121	Acanthochromis_polyacanthus
ENSLACG00000010998	-	86	47.333	ENSAPOG00000016494	-	72	47.333	Acanthochromis_polyacanthus
ENSLACG00000010998	-	87	49.007	ENSACIG00000019704	-	73	49.007	Amphilophus_citrinellus
ENSLACG00000010998	-	76	64.394	ENSACIG00000013806	-	69	66.400	Amphilophus_citrinellus
ENSLACG00000010998	-	56	69.072	ENSAOCG00000007730	-	57	69.072	Amphiprion_ocellaris
ENSLACG00000010998	-	83	62.585	ENSAOCG00000011000	-	85	62.585	Amphiprion_ocellaris
ENSLACG00000010998	-	74	65.185	ENSAPEG00000019531	-	76	65.185	Amphiprion_percula
ENSLACG00000010998	-	53	53.261	ENSAPEG00000017745	-	59	53.261	Amphiprion_percula
ENSLACG00000010998	-	56	67.010	ENSATEG00000004340	-	69	67.010	Anabas_testudineus
ENSLACG00000010998	-	87	50.658	ENSACLG00000001013	-	84	50.658	Astatotilapia_calliptera
ENSLACG00000010998	-	83	63.889	ENSAMXG00000037914	-	85	63.889	Astyanax_mexicanus
ENSLACG00000010998	-	86	43.624	WBGene00004479	rps-10	86	43.624	Caenorhabditis_elegans
ENSLACG00000010998	-	77	48.936	ENSCING00000006180	-	88	48.936	Ciona_intestinalis
ENSLACG00000010998	-	84	63.514	ENSCSEG00000009179	-	86	63.514	Cynoglossus_semilaevis
ENSLACG00000010998	-	76	54.074	FBgn0285947	RpS10b	84	54.074	Drosophila_melanogaster
ENSLACG00000010998	-	59	53.922	FBgn0027494	RpS10a	79	46.575	Drosophila_melanogaster
ENSLACG00000010998	-	70	58.268	ENSEBUG00000015221	-	83	58.268	Eptatretus_burgeri
ENSLACG00000010998	-	80	64.748	ENSEASG00005009727	-	61	64.748	Equus_asinus_asinus
ENSLACG00000010998	-	72	65.079	ENSFHEG00000008769	-	78	65.079	Fundulus_heteroclitus
ENSLACG00000010998	-	72	66.400	ENSGAFG00000001335	-	64	66.400	Gambusia_affinis
ENSLACG00000010998	-	72	65.600	ENSHBUG00000023819	-	75	65.600	Haplochromis_burtoni
ENSLACG00000010998	-	87	50.658	ENSHBUG00000018067	-	84	50.658	Haplochromis_burtoni
ENSLACG00000010998	-	75	63.359	ENSLBEG00000020432	-	81	63.359	Labrus_bergylta
ENSLACG00000010998	-	63	65.138	ENSMAMG00000006622	-	52	65.138	Mastacembelus_armatus
ENSLACG00000010998	-	87	50.658	ENSMZEG00005026198	-	84	50.658	Maylandia_zebra
ENSLACG00000010998	-	72	65.600	ENSMZEG00005007838	-	75	65.600	Maylandia_zebra
ENSLACG00000010998	-	57	71.000	ENSMMOG00000014380	-	52	71.000	Mola_mola
ENSLACG00000010998	-	68	68.595	ENSMMOG00000003228	-	68	68.595	Mola_mola
ENSLACG00000010998	-	61	63.551	ENSMALG00000015614	-	66	63.551	Monopterus_albus
ENSLACG00000010998	-	72	64.800	ENSNBRG00000008848	-	86	64.800	Neolamprologus_brichardi
ENSLACG00000010998	-	87	50.658	ENSNBRG00000016554	-	84	50.658	Neolamprologus_brichardi
ENSLACG00000010998	-	83	63.333	ENSPKIG00000013061	-	81	63.333	Paramormyrops_kingsleyae
ENSLACG00000010998	-	72	68.000	ENSPMGG00000017071	-	66	68.000	Periophthalmus_magnuspinnatus
ENSLACG00000010998	-	86	58.974	ENSPMAG00000010266	-	76	58.974	Petromyzon_marinus
ENSLACG00000010998	-	93	52.174	ENSPMAG00000003064	-	88	52.174	Petromyzon_marinus
ENSLACG00000010998	-	67	67.521	ENSPLAG00000012690	-	70	67.521	Poecilia_latipinna
ENSLACG00000010998	-	72	64.800	ENSPNYG00000012665	-	75	64.800	Pundamilia_nyererei
ENSLACG00000010998	-	87	50.000	ENSPNYG00000006286	-	84	50.000	Pundamilia_nyererei
ENSLACG00000010998	-	91	53.797	ENSPNAG00000021290	-	85	53.797	Pygocentrus_nattereri
ENSLACG00000010998	-	57	47.000	YMR230W	RPS10B	93	47.000	Saccharomyces_cerevisiae
ENSLACG00000010998	-	57	48.000	YOR293W	RPS10A	93	48.000	Saccharomyces_cerevisiae
ENSLACG00000010998	-	83	64.626	ENSSFOG00015009603	-	79	63.291	Scleropages_formosus
ENSLACG00000010998	-	60	78.095	ENSSFOG00015012004	-	59	78.095	Scleropages_formosus
ENSLACG00000010998	-	77	59.701	ENSSDUG00000011052	-	80	59.701	Seriola_dumerili
ENSLACG00000010998	-	72	67.200	ENSSDUG00000010997	-	74	67.200	Seriola_dumerili
ENSLACG00000010998	-	72	67.200	ENSSLDG00000012473	-	79	67.200	Seriola_lalandi_dorsalis
ENSLACG00000010998	-	83	56.552	ENSSLDG00000016257	-	78	56.552	Seriola_lalandi_dorsalis
ENSLACG00000010998	-	87	48.171	ENSSPAG00000012512	-	86	48.171	Stegastes_partitus
ENSLACG00000010998	-	57	77.000	ENSSPAG00000015615	-	78	77.000	Stegastes_partitus
ENSLACG00000010998	-	57	81.818	ENSSSCG00000033521	-	75	69.919	Sus_scrofa
ENSLACG00000010998	-	84	64.667	ENSXETG00000032983	-	73	67.333	Xenopus_tropicalis
ENSLACG00000010998	-	72	66.400	ENSXCOG00000016917	-	77	66.400	Xiphophorus_couchianus
ENSLACG00000010998	-	53	74.194	ENSXMAG00000029046	-	54	74.194	Xiphophorus_maculatus