EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000011004 (Gene tree)
Gene ID: -
Gene Symbol: FAM83F
Alias: -
Full Name: family with sequence similarity 83 member F
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 16994 bases
Position: chrJH128069.1:556641-573634
Accession: 25148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012489	FAM83	PF07894.12	3.4e-102	1	1
ENSLACP00000012488	FAM83	PF07894.12	2.7e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012581	FAM83F-201	900	-	ENSLACP00000012488	300 (aa)	-	H3AS67
ENSLACT00000012582	FAM83F-202	921	-	ENSLACP00000012489	307 (aa)	-	H3AS68

Gene Model

Click here to download ENSLACG00000011004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000011004	FAM83F	90	30.072	ENSLACG00000009464	FAM83A	65	30.072
ENSLACG00000011004	FAM83F	92	31.741	ENSLACG00000005534	FAM83C	53	31.802
ENSLACG00000011004	FAM83F	100	39.867	ENSLACG00000008573	FAM83E	64	39.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011004	FAM83F	100	47.678	ENSG00000133477	FAM83F	61	47.937	Homo_sapiens
ENSLACG00000011004	FAM83F	68	53.110	ENSAMEG00000011020	FAM83F	58	53.110	Ailuropoda_melanoleuca
ENSLACG00000011004	FAM83F	99	46.154	ENSAPLG00000009665	FAM83F	59	45.819	Anas_platyrhynchos
ENSLACG00000011004	FAM83F	99	43.791	ENSACAG00000007387	FAM83F	59	43.791	Anolis_carolinensis
ENSLACG00000011004	FAM83F	100	46.319	ENSANAG00000027381	FAM83F	62	47.302	Aotus_nancymaae
ENSLACG00000011004	FAM83F	100	46.417	ENSBTAG00000014247	FAM83F	61	49.032	Bos_taurus
ENSLACG00000011004	FAM83F	100	47.222	ENSCJAG00000002721	FAM83F	62	47.003	Callithrix_jacchus
ENSLACG00000011004	FAM83F	99	46.815	ENSCAFG00020002339	FAM83F	60	48.089	Canis_lupus_dingo
ENSLACG00000011004	FAM83F	99	47.249	ENSCHIG00000026060	FAM83F	61	48.377	Capra_hircus
ENSLACG00000011004	FAM83F	98	45.752	ENSTSYG00000028609	FAM83F	61	46.535	Carlito_syrichta
ENSLACG00000011004	FAM83F	67	50.249	ENSCAPG00000004680	FAM83F	50	50.249	Cavia_aperea
ENSLACG00000011004	FAM83F	100	45.912	ENSCPOG00000014133	FAM83F	61	46.774	Cavia_porcellus
ENSLACG00000011004	FAM83F	100	46.440	ENSCCAG00000026740	FAM83F	62	47.937	Cebus_capucinus
ENSLACG00000011004	FAM83F	100	47.368	ENSCATG00000035519	FAM83F	61	47.756	Cercocebus_atys
ENSLACG00000011004	FAM83F	100	45.768	ENSCLAG00000016721	FAM83F	60	46.732	Chinchilla_lanigera
ENSLACG00000011004	FAM83F	100	47.368	ENSCSAG00000006058	FAM83F	61	47.756	Chlorocebus_sabaeus
ENSLACG00000011004	FAM83F	70	50.935	ENSCHOG00000010532	FAM83F	53	50.226	Choloepus_hoffmanni
ENSLACG00000011004	FAM83F	100	44.872	ENSCPBG00000022941	FAM83F	63	46.333	Chrysemys_picta_bellii
ENSLACG00000011004	FAM83F	84	47.727	ENSCANG00000030851	FAM83F	57	48.659	Colobus_angolensis_palliatus
ENSLACG00000011004	FAM83F	99	49.000	ENSCGRG00001018899	Fam83f	61	49.000	Cricetulus_griseus_chok1gshd
ENSLACG00000011004	FAM83F	97	46.980	ENSDNOG00000046641	FAM83F	61	46.624	Dasypus_novemcinctus
ENSLACG00000011004	FAM83F	84	49.035	ENSDORG00000013192	Fam83f	56	48.496	Dipodomys_ordii
ENSLACG00000011004	FAM83F	97	42.444	ENSETEG00000016860	FAM83F	62	44.147	Echinops_telfairi
ENSLACG00000011004	FAM83F	100	47.022	ENSEASG00005005338	FAM83F	60	47.267	Equus_asinus_asinus
ENSLACG00000011004	FAM83F	100	45.625	ENSECAG00000009129	FAM83F	61	47.419	Equus_caballus
ENSLACG00000011004	FAM83F	99	46.667	ENSFCAG00000013509	FAM83F	61	47.937	Felis_catus
ENSLACG00000011004	FAM83F	100	46.302	ENSFALG00000012211	FAM83F	58	47.000	Ficedula_albicollis
ENSLACG00000011004	FAM83F	100	45.833	ENSGAGG00000007869	FAM83F	62	46.333	Gopherus_agassizii
ENSLACG00000011004	FAM83F	100	47.678	ENSGGOG00000006871	FAM83F	61	47.937	Gorilla_gorilla
ENSLACG00000011004	FAM83F	97	46.154	ENSHGLG00000017812	FAM83F	60	46.078	Heterocephalus_glaber_female
ENSLACG00000011004	FAM83F	89	45.985	ENSHGLG00100004088	FAM83F	58	45.907	Heterocephalus_glaber_male
ENSLACG00000011004	FAM83F	100	47.284	ENSJJAG00000011999	Fam83f	62	48.185	Jaculus_jaculus
ENSLACG00000011004	FAM83F	98	43.730	ENSLAFG00000016675	FAM83F	71	44.884	Loxodonta_africana
ENSLACG00000011004	FAM83F	100	48.287	ENSMFAG00000002020	FAM83F	62	48.710	Macaca_fascicularis
ENSLACG00000011004	FAM83F	100	47.368	ENSMMUG00000017166	FAM83F	61	47.756	Macaca_mulatta
ENSLACG00000011004	FAM83F	100	47.368	ENSMNEG00000033076	FAM83F	61	47.756	Macaca_nemestrina
ENSLACG00000011004	FAM83F	72	52.968	ENSMLEG00000034781	FAM83F	52	52.968	Mandrillus_leucophaeus
ENSLACG00000011004	FAM83F	100	46.624	ENSMGAG00000012348	FAM83F	60	47.000	Meleagris_gallopavo
ENSLACG00000011004	FAM83F	100	47.742	ENSMAUG00000015744	Fam83f	60	48.667	Mesocricetus_auratus
ENSLACG00000011004	FAM83F	100	47.040	ENSMICG00000016129	FAM83F	61	47.923	Microcebus_murinus
ENSLACG00000011004	FAM83F	99	49.007	ENSMOCG00000003997	Fam83f	61	49.007	Microtus_ochrogaster
ENSLACG00000011004	FAM83F	100	45.741	MGP_CAROLIEiJ_G0020042	Fam83f	61	45.955	Mus_caroli
ENSLACG00000011004	FAM83F	100	46.372	ENSMUSG00000022408	Fam83f	61	46.602	Mus_musculus
ENSLACG00000011004	FAM83F	100	47.785	MGP_PahariEiJ_G0020044	Fam83f	61	48.052	Mus_pahari
ENSLACG00000011004	FAM83F	100	46.057	MGP_SPRETEiJ_G0020940	Fam83f	61	46.278	Mus_spretus
ENSLACG00000011004	FAM83F	100	44.582	ENSMLUG00000015534	FAM83F	63	45.161	Myotis_lucifugus
ENSLACG00000011004	FAM83F	100	46.006	ENSNGAG00000020952	Fam83f	61	46.774	Nannospalax_galili
ENSLACG00000011004	FAM83F	100	47.812	ENSNLEG00000015307	FAM83F	61	48.077	Nomascus_leucogenys
ENSLACG00000011004	FAM83F	100	45.768	ENSODEG00000012376	FAM83F	61	46.602	Octodon_degus
ENSLACG00000011004	FAM83F	66	51.010	ENSOCUG00000014060	FAM83F	56	46.748	Oryctolagus_cuniculus
ENSLACG00000011004	FAM83F	100	48.438	ENSOGAG00000030522	FAM83F	61	48.232	Otolemur_garnettii
ENSLACG00000011004	FAM83F	99	47.115	ENSPPRG00000021618	FAM83F	61	48.077	Panthera_pardus
ENSLACG00000011004	FAM83F	100	47.678	ENSPTRG00000014405	FAM83F	61	47.937	Pan_troglodytes
ENSLACG00000011004	FAM83F	100	47.368	ENSPANG00000016392	FAM83F	61	47.756	Papio_anubis
ENSLACG00000011004	FAM83F	99	47.682	ENSPEMG00000010602	Fam83f	62	48.515	Peromyscus_maniculatus_bairdii
ENSLACG00000011004	FAM83F	99	46.078	ENSPCIG00000020369	FAM83F	60	46.078	Phascolarctos_cinereus
ENSLACG00000011004	FAM83F	100	47.368	ENSPPYG00000011847	FAM83F	61	49.038	Pongo_abelii
ENSLACG00000011004	FAM83F	96	47.869	ENSPCAG00000008047	FAM83F	59	48.684	Procavia_capensis
ENSLACG00000011004	FAM83F	100	46.875	ENSPCOG00000016351	FAM83F	61	47.910	Propithecus_coquereli
ENSLACG00000011004	FAM83F	98	47.078	ENSPVAG00000004972	FAM83F	60	46.885	Pteropus_vampyrus
ENSLACG00000011004	FAM83F	100	46.372	ENSRNOG00000018330	Fam83f	61	47.231	Rattus_norvegicus
ENSLACG00000011004	FAM83F	100	47.368	ENSRBIG00000028821	FAM83F	61	48.544	Rhinopithecus_bieti
ENSLACG00000011004	FAM83F	100	47.368	ENSRROG00000031286	FAM83F	61	48.544	Rhinopithecus_roxellana
ENSLACG00000011004	FAM83F	87	46.570	ENSSBOG00000024462	FAM83F	59	47.500	Saimiri_boliviensis_boliviensis
ENSLACG00000011004	FAM83F	99	47.492	ENSSPUG00000010758	FAM83F	59	47.492	Sphenodon_punctatus
ENSLACG00000011004	FAM83F	97	47.883	ENSSSCG00000000079	FAM83F	61	48.089	Sus_scrofa
ENSLACG00000011004	FAM83F	100	47.604	ENSTGUG00000010169	FAM83F	65	47.333	Taeniopygia_guttata
ENSLACG00000011004	FAM83F	99	45.806	ENSTBEG00000005578	FAM83F	61	46.452	Tupaia_belangeri
ENSLACG00000011004	FAM83F	99	47.468	ENSUAMG00000007221	FAM83F	61	48.562	Ursus_americanus
ENSLACG00000011004	FAM83F	51	43.396	ENSXETG00000024810	-	95	43.396	Xenopus_tropicalis