EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000011039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1515 bases
Position: chrJH127432.1:560452-561966
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012527	RVT_1	PF00078.27	5.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012621	-	1422	-	ENSLACP00000012527	474 (aa)	-	H3ASA6

Gene Model

Click here to download ENSLACG00000011039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000011039	-	85	31.127	ENSLACG00000007658	-	97	31.127
ENSLACG00000011039	-	93	30.000	ENSLACG00000011569	-	52	30.000
ENSLACG00000011039	-	54	31.923	ENSLACG00000002615	-	100	31.923
ENSLACG00000011039	-	58	33.452	ENSLACG00000006232	-	94	31.068
ENSLACG00000011039	-	58	87.189	ENSLACG00000011144	-	99	87.189
ENSLACG00000011039	-	53	86.719	ENSLACG00000014709	-	65	86.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011039	-	69	32.283	ENSLOCG00000006272	-	83	32.624	Lepisosteus_oculatus
ENSLACG00000011039	-	65	37.463	ENSMODG00000028824	-	99	37.463	Monodelphis_domestica
ENSLACG00000011039	-	66	37.500	ENSMODG00000029062	-	99	37.500	Monodelphis_domestica
ENSLACG00000011039	-	83	40.094	ENSMODG00000029011	-	99	40.094	Monodelphis_domestica
ENSLACG00000011039	-	59	50.165	ENSPSIG00000001304	-	96	50.165	Pelodiscus_sinensis
ENSLACG00000011039	-	55	37.716	ENSPSIG00000001480	-	100	37.716	Pelodiscus_sinensis