EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011059 (Gene tree)
Gene ID: 102356946
Gene Symbol: PNPT1
Alias: DFNB70|OLD35|PNPase|old-35
Full Name: polyribonucleotide nucleotidyltransferase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 56284 bases
Position: chrJH127673.1:562876-619159
Accession: 102356946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012551	KH_1	PF00013.29	3.9e-07	1	1
ENSLACP00000012552	KH_1	PF00013.29	4.2e-07	1	1
ENSLACP00000012552	RNase_PH	PF01138.21	3.5e-34	1	2
ENSLACP00000012552	RNase_PH	PF01138.21	3.5e-34	2	2
ENSLACP00000012551	RNase_PH	PF01138.21	6.6e-33	1	2
ENSLACP00000012551	RNase_PH	PF01138.21	6.6e-33	2	2
ENSLACP00000012551	PNPase	PF03726.14	2.1e-07	1	1
ENSLACP00000012552	PNPase	PF03726.14	2.2e-07	1	1
ENSLACP00000012551	S1	PF00575.23	1e-05	1	1
ENSLACP00000012552	S1	PF00575.23	1e-05	1	1
ENSLACP00000012551	RNase_PH_C	PF03725.15	6.8e-17	1	1
ENSLACP00000012552	RNase_PH_C	PF03725.15	3.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012646	PNPT1-202	2172	-	ENSLACP00000012552	724 (aa)	-	H3ASD1
ENSLACT00000012645	PNPT1-201	3408	XM_006004910	ENSLACP00000012551	698 (aa)	-	H3ASD0

Gene Model

Click here to download ENSLACG00000011059's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011059	PNPT1	99	81.792	ENSG00000138035	PNPT1	90	80.309	Homo_sapiens
ENSLACG00000011059	PNPT1	98	81.514	ENSAPOG00000005581	PNPT1	96	77.824	Acanthochromis_polyacanthus
ENSLACG00000011059	PNPT1	99	83.405	ENSAMEG00000003772	PNPT1	90	81.882	Ailuropoda_melanoleuca
ENSLACG00000011059	PNPT1	99	81.178	ENSACIG00000010140	PNPT1	98	79.498	Amphilophus_citrinellus
ENSLACG00000011059	PNPT1	99	81.609	ENSAOCG00000020109	PNPT1	92	79.916	Amphiprion_ocellaris
ENSLACG00000011059	PNPT1	99	79.598	ENSAPEG00000002299	PNPT1	95	77.964	Amphiprion_percula
ENSLACG00000011059	PNPT1	99	81.923	ENSATEG00000011164	PNPT1	91	81.923	Anabas_testudineus
ENSLACG00000011059	PNPT1	99	82.209	ENSAPLG00000002885	PNPT1	95	82.209	Anas_platyrhynchos
ENSLACG00000011059	PNPT1	99	83.885	ENSACAG00000003692	PNPT1	88	83.885	Anolis_carolinensis
ENSLACG00000011059	PNPT1	99	81.936	ENSANAG00000023709	PNPT1	90	80.450	Aotus_nancymaae
ENSLACG00000011059	PNPT1	99	81.727	ENSACLG00000024267	PNPT1	90	81.727	Astatotilapia_calliptera
ENSLACG00000011059	PNPT1	99	79.828	ENSAMXG00000042321	PNPT1	97	78.631	Astyanax_mexicanus
ENSLACG00000011059	PNPT1	99	81.647	ENSBTAG00000008909	PNPT1	90	80.169	Bos_taurus
ENSLACG00000011059	PNPT1	98	42.258	WBGene00015266	BE0003N10.1	92	41.702	Caenorhabditis_elegans
ENSLACG00000011059	PNPT1	99	81.936	ENSCJAG00000009740	PNPT1	90	80.450	Callithrix_jacchus
ENSLACG00000011059	PNPT1	99	79.424	ENSCAFG00000002891	PNPT1	88	79.424	Canis_familiaris
ENSLACG00000011059	PNPT1	99	83.382	ENSCAFG00020026841	PNPT1	90	81.857	Canis_lupus_dingo
ENSLACG00000011059	PNPT1	99	78.613	ENSCHIG00000025034	PNPT1	88	78.613	Capra_hircus
ENSLACG00000011059	PNPT1	99	82.370	ENSTSYG00000006536	PNPT1	88	82.370	Carlito_syrichta
ENSLACG00000011059	PNPT1	99	64.900	ENSCAPG00000013300	PNPT1	97	64.017	Cavia_aperea
ENSLACG00000011059	PNPT1	99	82.514	ENSCPOG00000011008	PNPT1	90	81.013	Cavia_porcellus
ENSLACG00000011059	PNPT1	99	81.503	ENSCCAG00000037909	PNPT1	90	80.028	Cebus_capucinus
ENSLACG00000011059	PNPT1	99	61.561	ENSCATG00000036442	-	91	60.619	Cercocebus_atys
ENSLACG00000011059	PNPT1	99	82.659	ENSCATG00000031551	PNPT1	89	82.659	Cercocebus_atys
ENSLACG00000011059	PNPT1	99	82.659	ENSCLAG00000006240	PNPT1	90	81.241	Chinchilla_lanigera
ENSLACG00000011059	PNPT1	99	82.684	ENSCSAG00000014324	PNPT1	90	81.180	Chlorocebus_sabaeus
ENSLACG00000011059	PNPT1	99	69.509	ENSCHOG00000007360	PNPT1	95	69.509	Choloepus_hoffmanni
ENSLACG00000011059	PNPT1	99	85.159	ENSCPBG00000020856	PNPT1	87	85.159	Chrysemys_picta_bellii
ENSLACG00000011059	PNPT1	99	64.348	ENSCANG00000028159	-	91	63.329	Colobus_angolensis_palliatus
ENSLACG00000011059	PNPT1	99	82.225	ENSCANG00000034019	PNPT1	90	80.731	Colobus_angolensis_palliatus
ENSLACG00000011059	PNPT1	99	81.792	ENSCGRG00001012245	Pnpt1	88	81.792	Cricetulus_griseus_chok1gshd
ENSLACG00000011059	PNPT1	99	81.647	ENSCGRG00000007624	Pnpt1	88	81.647	Cricetulus_griseus_crigri
ENSLACG00000011059	PNPT1	99	76.868	ENSCSEG00000000809	PNPT1	99	75.524	Cynoglossus_semilaevis
ENSLACG00000011059	PNPT1	88	82.437	ENSCVAG00000010037	PNPT1	99	82.437	Cyprinodon_variegatus
ENSLACG00000011059	PNPT1	99	81.069	ENSDNOG00000046753	PNPT1	90	79.466	Dasypus_novemcinctus
ENSLACG00000011059	PNPT1	99	82.948	ENSDORG00000011409	Pnpt1	90	81.523	Dipodomys_ordii
ENSLACG00000011059	PNPT1	98	57.267	FBgn0039846	PNPase	90	56.312	Drosophila_melanogaster
ENSLACG00000011059	PNPT1	99	62.428	ENSETEG00000001582	-	81	70.447	Echinops_telfairi
ENSLACG00000011059	PNPT1	99	54.545	ENSEBUG00000010305	PNPT1	91	53.672	Eptatretus_burgeri
ENSLACG00000011059	PNPT1	99	82.514	ENSEASG00005001974	PNPT1	90	81.013	Equus_asinus_asinus
ENSLACG00000011059	PNPT1	99	82.659	ENSECAG00000020058	PNPT1	96	81.702	Equus_caballus
ENSLACG00000011059	PNPT1	99	73.237	ENSEEUG00000015610	PNPT1	88	73.237	Erinaceus_europaeus
ENSLACG00000011059	PNPT1	99	82.117	ENSELUG00000004795	PNPT1	93	82.117	Esox_lucius
ENSLACG00000011059	PNPT1	99	83.092	ENSFCAG00000013236	PNPT1	90	81.575	Felis_catus
ENSLACG00000011059	PNPT1	99	82.828	ENSFALG00000011214	PNPT1	97	81.180	Ficedula_albicollis
ENSLACG00000011059	PNPT1	99	81.069	ENSFDAG00000017446	PNPT1	91	79.606	Fukomys_damarensis
ENSLACG00000011059	PNPT1	99	81.034	ENSFHEG00000006495	PNPT1	95	81.034	Fundulus_heteroclitus
ENSLACG00000011059	PNPT1	99	80.058	ENSGMOG00000006805	PNPT1	90	80.058	Gadus_morhua
ENSLACG00000011059	PNPT1	99	82.302	ENSGALG00000043545	PNPT1	87	82.302	Gallus_gallus
ENSLACG00000011059	PNPT1	99	80.891	ENSGAFG00000019681	PNPT1	95	79.513	Gambusia_affinis
ENSLACG00000011059	PNPT1	99	79.424	ENSGACG00000010840	PNPT1	90	79.424	Gasterosteus_aculeatus
ENSLACG00000011059	PNPT1	99	68.786	ENSGGOG00000041496	-	91	67.127	Gorilla_gorilla
ENSLACG00000011059	PNPT1	99	81.792	ENSGGOG00000006867	PNPT1	90	80.309	Gorilla_gorilla
ENSLACG00000011059	PNPT1	99	81.818	ENSHBUG00000013041	PNPT1	92	79.942	Haplochromis_burtoni
ENSLACG00000011059	PNPT1	99	81.766	ENSHGLG00000007480	PNPT1	90	80.282	Heterocephalus_glaber_female
ENSLACG00000011059	PNPT1	87	77.063	ENSHGLG00000010054	-	86	77.063	Heterocephalus_glaber_female
ENSLACG00000011059	PNPT1	97	72.312	ENSHGLG00100007397	-	91	70.423	Heterocephalus_glaber_male
ENSLACG00000011059	PNPT1	99	81.766	ENSHGLG00100010920	PNPT1	90	80.282	Heterocephalus_glaber_male
ENSLACG00000011059	PNPT1	99	68.406	ENSHCOG00000002817	PNPT1	94	67.468	Hippocampus_comes
ENSLACG00000011059	PNPT1	99	79.076	ENSIPUG00000014624	PNPT1	95	79.076	Ictalurus_punctatus
ENSLACG00000011059	PNPT1	99	83.092	ENSSTOG00000006304	PNPT1	90	81.575	Ictidomys_tridecemlineatus
ENSLACG00000011059	PNPT1	99	80.925	ENSJJAG00000019227	Pnpt1	88	80.925	Jaculus_jaculus
ENSLACG00000011059	PNPT1	99	79.856	ENSKMAG00000017389	PNPT1	92	78.431	Kryptolebias_marmoratus
ENSLACG00000011059	PNPT1	99	81.097	ENSLBEG00000027692	PNPT1	95	77.669	Labrus_bergylta
ENSLACG00000011059	PNPT1	99	81.571	ENSLOCG00000015375	PNPT1	88	81.571	Lepisosteus_oculatus
ENSLACG00000011059	PNPT1	99	77.554	ENSLAFG00000021462	PNPT1	90	76.438	Loxodonta_africana
ENSLACG00000011059	PNPT1	99	82.659	ENSMFAG00000001927	PNPT1	90	81.153	Macaca_fascicularis
ENSLACG00000011059	PNPT1	88	82.297	ENSMMUG00000007003	PNPT1	98	82.297	Macaca_mulatta
ENSLACG00000011059	PNPT1	99	82.659	ENSMNEG00000038589	PNPT1	95	82.659	Macaca_nemestrina
ENSLACG00000011059	PNPT1	99	60.405	ENSMLEG00000028524	-	91	60.197	Mandrillus_leucophaeus
ENSLACG00000011059	PNPT1	99	78.757	ENSMLEG00000038706	PNPT1	88	78.757	Mandrillus_leucophaeus
ENSLACG00000011059	PNPT1	99	76.149	ENSMAMG00000021954	PNPT1	93	74.825	Mastacembelus_armatus
ENSLACG00000011059	PNPT1	99	81.727	ENSMZEG00005027363	PNPT1	92	79.856	Maylandia_zebra
ENSLACG00000011059	PNPT1	99	82.446	ENSMGAG00000001952	PNPT1	95	82.446	Meleagris_gallopavo
ENSLACG00000011059	PNPT1	99	81.358	ENSMAUG00000013652	Pnpt1	88	81.358	Mesocricetus_auratus
ENSLACG00000011059	PNPT1	99	82.225	ENSMICG00000009369	PNPT1	90	80.731	Microcebus_murinus
ENSLACG00000011059	PNPT1	99	81.214	ENSMOCG00000002820	Pnpt1	88	81.214	Microtus_ochrogaster
ENSLACG00000011059	PNPT1	99	76.814	ENSMMOG00000007480	PNPT1	97	76.814	Mola_mola
ENSLACG00000011059	PNPT1	99	79.741	ENSMODG00000001984	PNPT1	90	78.541	Monodelphis_domestica
ENSLACG00000011059	PNPT1	99	82.184	ENSMALG00000018484	PNPT1	98	77.406	Monopterus_albus
ENSLACG00000011059	PNPT1	99	81.069	MGP_CAROLIEiJ_G0016153	Pnpt1	88	81.069	Mus_caroli
ENSLACG00000011059	PNPT1	99	80.780	ENSMUSG00000020464	Pnpt1	90	79.549	Mus_musculus
ENSLACG00000011059	PNPT1	99	81.358	MGP_PahariEiJ_G0016737	Pnpt1	88	81.358	Mus_pahari
ENSLACG00000011059	PNPT1	99	81.214	MGP_SPRETEiJ_G0016996	Pnpt1	92	81.214	Mus_spretus
ENSLACG00000011059	PNPT1	99	82.853	ENSMPUG00000002353	PNPT1	90	81.346	Mustela_putorius_furo
ENSLACG00000011059	PNPT1	99	82.421	ENSMLUG00000003886	PNPT1	90	81.180	Myotis_lucifugus
ENSLACG00000011059	PNPT1	99	81.214	ENSNGAG00000020856	-	90	79.747	Nannospalax_galili
ENSLACG00000011059	PNPT1	78	77.879	ENSNBRG00000012517	PNPT1	88	77.879	Neolamprologus_brichardi
ENSLACG00000011059	PNPT1	99	79.335	ENSNLEG00000009354	PNPT1	90	77.918	Nomascus_leucogenys
ENSLACG00000011059	PNPT1	91	74.545	ENSNLEG00000003327	-	86	74.545	Nomascus_leucogenys
ENSLACG00000011059	PNPT1	99	79.191	ENSOPRG00000010232	-	90	77.856	Ochotona_princeps
ENSLACG00000011059	PNPT1	99	82.659	ENSODEG00000012137	PNPT1	90	81.153	Octodon_degus
ENSLACG00000011059	PNPT1	99	81.439	ENSONIG00000000983	PNPT1	89	81.439	Oreochromis_niloticus
ENSLACG00000011059	PNPT1	99	83.382	ENSOANG00000011178	PNPT1	98	83.382	Ornithorhynchus_anatinus
ENSLACG00000011059	PNPT1	99	82.709	ENSOCUG00000006889	PNPT1	90	81.206	Oryctolagus_cuniculus
ENSLACG00000011059	PNPT1	99	82.446	ENSORLG00000004335	PNPT1	89	81.092	Oryzias_latipes
ENSLACG00000011059	PNPT1	99	82.446	ENSORLG00015018951	PNPT1	96	82.446	Oryzias_latipes_hsok
ENSLACG00000011059	PNPT1	99	79.226	ENSOGAG00000009840	PNPT1	90	78.073	Otolemur_garnettii
ENSLACG00000011059	PNPT1	99	81.818	ENSOARG00000002164	PNPT1	90	80.337	Ovis_aries
ENSLACG00000011059	PNPT1	99	66.908	ENSPPAG00000040514	-	89	65.460	Pan_paniscus
ENSLACG00000011059	PNPT1	89	80.547	ENSPPAG00000024705	PNPT1	88	80.547	Pan_paniscus
ENSLACG00000011059	PNPT1	99	83.237	ENSPPRG00000001366	PNPT1	90	81.716	Panthera_pardus
ENSLACG00000011059	PNPT1	99	83.382	ENSPTIG00000014915	PNPT1	90	81.857	Panthera_tigris_altaica
ENSLACG00000011059	PNPT1	99	66.185	ENSPTRG00000051411	-	89	65.532	Pan_troglodytes
ENSLACG00000011059	PNPT1	99	81.792	ENSPTRG00000011934	PNPT1	90	80.309	Pan_troglodytes
ENSLACG00000011059	PNPT1	99	82.659	ENSPANG00000022846	PNPT1	90	81.153	Papio_anubis
ENSLACG00000011059	PNPT1	99	82.319	ENSPKIG00000021612	PNPT1	95	78.696	Paramormyrops_kingsleyae
ENSLACG00000011059	PNPT1	99	85.159	ENSPSIG00000013120	PNPT1	92	83.966	Pelodiscus_sinensis
ENSLACG00000011059	PNPT1	99	81.647	ENSPEMG00000004284	Pnpt1	88	81.647	Peromyscus_maniculatus_bairdii
ENSLACG00000011059	PNPT1	99	76.286	ENSPMAG00000008932	PNPT1	95	76.286	Petromyzon_marinus
ENSLACG00000011059	PNPT1	99	80.519	ENSPCIG00000010236	PNPT1	88	80.519	Phascolarctos_cinereus
ENSLACG00000011059	PNPT1	99	80.460	ENSPFOG00000010229	PNPT1	92	79.021	Poecilia_formosa
ENSLACG00000011059	PNPT1	99	80.603	ENSPLAG00000009008	PNPT1	93	78.879	Poecilia_latipinna
ENSLACG00000011059	PNPT1	99	80.316	ENSPMEG00000004192	PNPT1	99	80.316	Poecilia_mexicana
ENSLACG00000011059	PNPT1	99	80.201	ENSPREG00000003072	PNPT1	96	80.201	Poecilia_reticulata
ENSLACG00000011059	PNPT1	99	81.936	ENSPPYG00000012399	PNPT1	90	80.450	Pongo_abelii
ENSLACG00000011059	PNPT1	99	72.977	ENSPCAG00000010806	PNPT1	95	72.977	Procavia_capensis
ENSLACG00000011059	PNPT1	99	69.828	ENSPCOG00000015664	PNPT1	97	68.671	Propithecus_coquereli
ENSLACG00000011059	PNPT1	77	76.149	ENSPVAG00000005379	PNPT1	72	75.000	Pteropus_vampyrus
ENSLACG00000011059	PNPT1	99	79.137	ENSPNYG00000000363	PNPT1	92	79.137	Pundamilia_nyererei
ENSLACG00000011059	PNPT1	99	81.674	ENSPNAG00000010891	PNPT1	90	81.674	Pygocentrus_nattereri
ENSLACG00000011059	PNPT1	99	81.792	ENSRNOG00000003600	Pnpt1	88	81.792	Rattus_norvegicus
ENSLACG00000011059	PNPT1	99	82.081	ENSRBIG00000043016	PNPT1	90	80.591	Rhinopithecus_bieti
ENSLACG00000011059	PNPT1	99	81.936	ENSRROG00000040537	PNPT1	90	80.450	Rhinopithecus_roxellana
ENSLACG00000011059	PNPT1	99	81.936	ENSSBOG00000032574	PNPT1	98	81.936	Saimiri_boliviensis_boliviensis
ENSLACG00000011059	PNPT1	69	82.536	ENSSHAG00000014040	PNPT1	97	82.536	Sarcophilus_harrisii
ENSLACG00000011059	PNPT1	99	72.126	ENSSFOG00015017596	PNPT1	93	70.972	Scleropages_formosus
ENSLACG00000011059	PNPT1	99	81.097	ENSSMAG00000018471	PNPT1	96	78.511	Scophthalmus_maximus
ENSLACG00000011059	PNPT1	99	81.375	ENSSDUG00000018584	PNPT1	91	81.375	Seriola_dumerili
ENSLACG00000011059	PNPT1	99	81.232	ENSSLDG00000023385	PNPT1	99	77.964	Seriola_lalandi_dorsalis
ENSLACG00000011059	PNPT1	85	74.845	ENSSARG00000012819	PNPT1	77	73.780	Sorex_araneus
ENSLACG00000011059	PNPT1	99	81.674	ENSSPUG00000011785	PNPT1	90	80.677	Sphenodon_punctatus
ENSLACG00000011059	PNPT1	99	80.087	ENSSPAG00000016880	PNPT1	96	76.184	Stegastes_partitus
ENSLACG00000011059	PNPT1	99	82.225	ENSSSCG00000031882	PNPT1	90	80.731	Sus_scrofa
ENSLACG00000011059	PNPT1	99	82.540	ENSTGUG00000006908	PNPT1	95	82.540	Taeniopygia_guttata
ENSLACG00000011059	PNPT1	98	80.640	ENSTRUG00000005495	PNPT1	96	78.879	Takifugu_rubripes
ENSLACG00000011059	PNPT1	98	80.116	ENSTNIG00000007460	PNPT1	95	78.303	Tetraodon_nigroviridis
ENSLACG00000011059	PNPT1	97	54.801	ENSTBEG00000010788	PNPT1	86	54.801	Tupaia_belangeri
ENSLACG00000011059	PNPT1	99	82.803	ENSTTRG00000000029	PNPT1	95	82.803	Tursiops_truncatus
ENSLACG00000011059	PNPT1	91	82.703	ENSUAMG00000017133	PNPT1	95	82.703	Ursus_americanus
ENSLACG00000011059	PNPT1	99	83.092	ENSUMAG00000018844	PNPT1	89	81.575	Ursus_maritimus
ENSLACG00000011059	PNPT1	99	74.566	ENSVPAG00000007097	PNPT1	90	73.277	Vicugna_pacos
ENSLACG00000011059	PNPT1	99	83.382	ENSVVUG00000010034	PNPT1	90	81.857	Vulpes_vulpes
ENSLACG00000011059	PNPT1	99	81.962	ENSXETG00000006075	pnpt1	88	81.962	Xenopus_tropicalis
ENSLACG00000011059	PNPT1	99	80.891	ENSXCOG00000013381	PNPT1	94	80.891	Xiphophorus_couchianus
ENSLACG00000011059	PNPT1	99	81.034	ENSXMAG00000016907	PNPT1	96	79.580	Xiphophorus_maculatus