EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011243 (Gene tree)
Gene ID: 102345141
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 15204 bases
Position: chrJH127083.1:584176-599379
Accession: 102345141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012765	Ribosomal_S18	PF01084.20	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012859	-	4930	XM_005999366	ENSLACP00000012765	128 (aa)	XP_005999428	H3ASZ4

Gene Model

Click here to download ENSLACG00000011243's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011243	mrps18c	83	68.868	ENSAPOG00000019045	mrps18c	81	68.868	Acanthochromis_polyacanthus
ENSLACG00000011243	mrps18c	68	67.816	ENSACIG00000020253	mrps18c	86	67.816	Amphilophus_citrinellus
ENSLACG00000011243	mrps18c	83	65.094	ENSAOCG00000014338	mrps18c	81	65.094	Amphiprion_ocellaris
ENSLACG00000011243	mrps18c	66	72.619	ENSAPEG00000023068	-	80	71.765	Amphiprion_percula
ENSLACG00000011243	mrps18c	81	66.346	ENSAPEG00000022956	mrps18c	80	66.346	Amphiprion_percula
ENSLACG00000011243	mrps18c	100	56.250	ENSATEG00000023417	mrps18c	98	56.250	Anabas_testudineus
ENSLACG00000011243	mrps18c	70	78.889	ENSAPLG00000012544	-	87	78.889	Anas_platyrhynchos
ENSLACG00000011243	mrps18c	69	69.318	ENSACLG00000010521	mrps18c	86	69.318	Astatotilapia_calliptera
ENSLACG00000011243	mrps18c	70	73.333	ENSAMXG00000012238	mrps18c	91	73.333	Astyanax_mexicanus
ENSLACG00000011243	mrps18c	85	73.394	ENSCPBG00000007783	-	67	73.394	Chrysemys_picta_bellii
ENSLACG00000011243	mrps18c	95	55.738	ENSCSEG00000000711	mrps18c	86	55.738	Cynoglossus_semilaevis
ENSLACG00000011243	mrps18c	100	53.030	ENSCVAG00000020169	mrps18c	98	53.030	Cyprinodon_variegatus
ENSLACG00000011243	mrps18c	84	61.682	ENSDARG00000069624	mrps18c	79	61.682	Danio_rerio
ENSLACG00000011243	mrps18c	84	66.355	ENSELUG00000024603	mrps18c	80	66.355	Esox_lucius
ENSLACG00000011243	mrps18c	100	56.818	ENSFHEG00000018752	-	98	56.818	Fundulus_heteroclitus
ENSLACG00000011243	mrps18c	100	56.818	ENSFHEG00000015550	mrps18c	93	56.818	Fundulus_heteroclitus
ENSLACG00000011243	mrps18c	85	69.725	ENSGALG00000023191	MRPS18C	76	69.725	Gallus_gallus
ENSLACG00000011243	mrps18c	100	54.545	ENSGAFG00000008048	mrps18c	81	54.545	Gambusia_affinis
ENSLACG00000011243	mrps18c	91	71.795	ENSGAGG00000015144	-	82	71.795	Gopherus_agassizii
ENSLACG00000011243	mrps18c	100	53.125	ENSHBUG00000002008	mrps18c	98	53.125	Haplochromis_burtoni
ENSLACG00000011243	mrps18c	69	71.591	ENSHCOG00000013161	mrps18c	67	71.591	Hippocampus_comes
ENSLACG00000011243	mrps18c	70	74.444	ENSIPUG00000003783	mrps18c	87	74.444	Ictalurus_punctatus
ENSLACG00000011243	mrps18c	100	55.303	ENSKMAG00000016467	mrps18c	98	55.303	Kryptolebias_marmoratus
ENSLACG00000011243	mrps18c	99	57.480	ENSLBEG00000021861	mrps18c	98	57.480	Labrus_bergylta
ENSLACG00000011243	mrps18c	99	57.480	ENSLBEG00000019174	mrps18c	98	57.480	Labrus_bergylta
ENSLACG00000011243	mrps18c	100	72.932	ENSLOCG00000012115	mrps18c	99	72.932	Lepisosteus_oculatus
ENSLACG00000011243	mrps18c	99	55.303	ENSMAMG00000012386	mrps18c	98	55.303	Mastacembelus_armatus
ENSLACG00000011243	mrps18c	100	53.125	ENSMZEG00005023278	mrps18c	98	53.125	Maylandia_zebra
ENSLACG00000011243	mrps18c	69	72.727	ENSMMOG00000011316	mrps18c	67	72.727	Mola_mola
ENSLACG00000011243	mrps18c	100	53.125	ENSNBRG00000006182	mrps18c	98	53.125	Neolamprologus_brichardi
ENSLACG00000011243	mrps18c	70	78.889	ENSMEUG00000010972	-	71	78.889	Notamacropus_eugenii
ENSLACG00000011243	mrps18c	100	53.125	ENSONIG00000012527	mrps18c	94	65.263	Oreochromis_niloticus
ENSLACG00000011243	mrps18c	99	55.906	ENSORLG00015006869	mrps18c	98	55.906	Oryzias_latipes_hsok
ENSLACG00000011243	mrps18c	67	68.605	ENSOMEG00000005009	mrps18c	83	68.605	Oryzias_melastigma
ENSLACG00000011243	mrps18c	99	62.500	ENSPKIG00000021736	mrps18c	90	62.500	Paramormyrops_kingsleyae
ENSLACG00000011243	mrps18c	69	72.727	ENSPMGG00000002991	mrps18c	89	72.727	Periophthalmus_magnuspinnatus
ENSLACG00000011243	mrps18c	100	55.469	ENSPFOG00000002351	mrps18c	81	55.469	Poecilia_formosa
ENSLACG00000011243	mrps18c	100	55.469	ENSPLAG00000015187	mrps18c	98	55.469	Poecilia_latipinna
ENSLACG00000011243	mrps18c	100	56.391	ENSPMEG00000014488	mrps18c	81	56.391	Poecilia_mexicana
ENSLACG00000011243	mrps18c	63	71.605	ENSPREG00000012593	mrps18c	83	71.605	Poecilia_reticulata
ENSLACG00000011243	mrps18c	100	52.344	ENSPNYG00000010654	mrps18c	98	52.344	Pundamilia_nyererei
ENSLACG00000011243	mrps18c	75	66.667	ENSPNAG00000009350	mrps18c	90	66.667	Pygocentrus_nattereri
ENSLACG00000011243	mrps18c	84	71.028	ENSSFOG00015019444	mrps18c	79	71.028	Scleropages_formosus
ENSLACG00000011243	mrps18c	100	57.812	ENSSDUG00000015676	mrps18c	98	57.812	Seriola_dumerili
ENSLACG00000011243	mrps18c	84	58.974	ENSSLDG00000002034	mrps18c	89	58.974	Seriola_lalandi_dorsalis
ENSLACG00000011243	mrps18c	81	69.231	ENSSPUG00000013990	-	76	69.231	Sphenodon_punctatus
ENSLACG00000011243	mrps18c	83	63.208	ENSSPAG00000008687	mrps18c	81	63.208	Stegastes_partitus
ENSLACG00000011243	mrps18c	99	49.606	ENSTRUG00000024403	mrps18c	98	49.606	Takifugu_rubripes
ENSLACG00000011243	mrps18c	99	51.969	ENSTNIG00000005674	mrps18c	98	51.969	Tetraodon_nigroviridis
ENSLACG00000011243	mrps18c	81	72.115	ENSXETG00000027597	mrps18c	78	72.115	Xenopus_tropicalis
ENSLACG00000011243	mrps18c	100	53.125	ENSXCOG00000016208	mrps18c	87	68.966	Xiphophorus_couchianus
ENSLACG00000011243	mrps18c	100	55.303	ENSXMAG00000012555	mrps18c	81	55.303	Xiphophorus_maculatus