EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000011272 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2670 bases
Position: chrJH127828.1:586602-589271
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012795	RVT_1	PF00078.27	5.1e-28	1	1
ENSLACP00000012795	RNase_H	PF00075.24	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012889	-	2127	-	ENSLACP00000012795	709 (aa)	-	H3AT24

Gene Model

Click here to download ENSLACG00000011272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000011272	-	82	79.417	ENSLACG00000002512	-	100	79.417
ENSLACG00000011272	-	69	46.262	ENSLACG00000009011	-	75	46.262
ENSLACG00000011272	-	96	40.741	ENSLACG00000016980	-	74	41.077
ENSLACG00000011272	-	64	30.667	ENSLACG00000016441	-	63	30.667
ENSLACG00000011272	-	93	67.954	ENSLACG00000002665	-	78	67.954
ENSLACG00000011272	-	98	31.199	ENSLACG00000015558	-	99	31.199
ENSLACG00000011272	-	62	32.986	ENSLACG00000009347	-	72	32.986
ENSLACG00000011272	-	70	31.930	ENSLACG00000007830	-	70	31.930
ENSLACG00000011272	-	89	32.834	ENSLACG00000004343	-	83	32.834
ENSLACG00000011272	-	65	32.218	ENSLACG00000006413	-	68	32.218
ENSLACG00000011272	-	72	30.508	ENSLACG00000011297	-	66	30.508
ENSLACG00000011272	-	90	37.072	ENSLACG00000005007	-	100	36.604
ENSLACG00000011272	-	85	32.877	ENSLACG00000008366	-	98	32.877
ENSLACG00000011272	-	94	35.070	ENSLACG00000018380	-	99	35.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011272	-	94	30.408	ENSAPEG00000002424	-	50	30.408	Amphiprion_percula
ENSLACG00000011272	-	68	31.780	ENSATEG00000016298	-	51	31.780	Anabas_testudineus
ENSLACG00000011272	-	63	32.046	ENSACLG00000021355	-	57	32.046	Astatotilapia_calliptera
ENSLACG00000011272	-	77	33.205	ENSACLG00000008010	-	51	33.205	Astatotilapia_calliptera
ENSLACG00000011272	-	66	30.864	ENSAMXG00000038480	-	69	30.864	Astyanax_mexicanus
ENSLACG00000011272	-	81	31.348	ENSAMXG00000041369	-	53	31.348	Astyanax_mexicanus
ENSLACG00000011272	-	86	32.184	ENSCVAG00000020907	-	83	32.184	Cyprinodon_variegatus
ENSLACG00000011272	-	69	36.364	ENSGAGG00000002613	-	66	36.364	Gopherus_agassizii
ENSLACG00000011272	-	87	30.698	ENSLOCG00000009957	-	74	30.864	Lepisosteus_oculatus
ENSLACG00000011272	-	74	31.667	ENSMZEG00005024252	-	63	31.667	Maylandia_zebra
ENSLACG00000011272	-	60	33.613	ENSORLG00000029184	-	56	33.613	Oryzias_latipes
ENSLACG00000011272	-	69	31.863	ENSORLG00000024878	-	52	31.863	Oryzias_latipes
ENSLACG00000011272	-	77	31.373	ENSORLG00020017608	-	53	31.373	Oryzias_latipes_hni
ENSLACG00000011272	-	54	32.975	ENSORLG00015013109	-	63	32.975	Oryzias_latipes_hsok
ENSLACG00000011272	-	67	30.909	ENSPKIG00000006120	-	53	30.909	Paramormyrops_kingsleyae
ENSLACG00000011272	-	76	31.023	ENSPKIG00000007924	-	58	31.023	Paramormyrops_kingsleyae
ENSLACG00000011272	-	59	42.623	ENSPSIG00000001614	-	61	42.623	Pelodiscus_sinensis
ENSLACG00000011272	-	78	33.446	ENSSLDG00000003503	-	52	33.446	Seriola_lalandi_dorsalis
ENSLACG00000011272	-	80	30.094	ENSXMAG00000023370	-	53	30.094	Xiphophorus_maculatus
ENSLACG00000011272	-	73	30.094	ENSXMAG00000029360	-	55	30.094	Xiphophorus_maculatus