EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011311 (Gene tree)
Gene ID: 102359871
Gene Symbol: SUGP1
Alias: -
Full Name: SURP and G-patch domain containing 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 23538 bases
Position: chrJH127088.1:589957-613494
Accession: 102359871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012846	Surp	PF01805.20	1.5e-29	1	2
ENSLACP00000012846	Surp	PF01805.20	1.5e-29	2	2
ENSLACP00000012847	Surp	PF01805.20	1.6e-29	1	2
ENSLACP00000012847	Surp	PF01805.20	1.6e-29	2	2
ENSLACP00000012846	G-patch	PF01585.23	2.9e-14	1	1
ENSLACP00000012847	G-patch	PF01585.23	2.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012940	SUGP1-201	4349	XM_005999419	ENSLACP00000012846	611 (aa)	XP_005999481	H3AT75
ENSLACT00000012941	SUGP1-202	1851	-	ENSLACP00000012847	616 (aa)	-	H3AT76

Gene Model

Click here to download ENSLACG00000011311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011311	SUGP1	100	70.762	ENSG00000105705	SUGP1	99	70.607	Homo_sapiens
ENSLACG00000011311	SUGP1	100	62.016	ENSAPOG00000004189	SUGP1	100	62.326	Acanthochromis_polyacanthus
ENSLACG00000011311	SUGP1	100	70.543	ENSAMEG00000011838	SUGP1	99	70.233	Ailuropoda_melanoleuca
ENSLACG00000011311	SUGP1	96	62.013	ENSACIG00000018294	SUGP1	96	61.039	Amphilophus_citrinellus
ENSLACG00000011311	SUGP1	100	63.256	ENSAOCG00000016128	SUGP1	100	61.538	Amphiprion_ocellaris
ENSLACG00000011311	SUGP1	100	63.411	ENSAPEG00000012114	SUGP1	100	61.692	Amphiprion_percula
ENSLACG00000011311	SUGP1	99	62.031	ENSATEG00000015089	SUGP1	99	61.478	Anabas_testudineus
ENSLACG00000011311	SUGP1	99	71.181	ENSAPLG00000002500	SUGP1	99	70.597	Anas_platyrhynchos
ENSLACG00000011311	SUGP1	70	72.995	ENSACAG00000008769	SUGP1	94	74.332	Anolis_carolinensis
ENSLACG00000011311	SUGP1	100	70.295	ENSANAG00000028538	SUGP1	99	69.829	Aotus_nancymaae
ENSLACG00000011311	SUGP1	96	62.662	ENSACLG00000002221	SUGP1	100	61.431	Astatotilapia_calliptera
ENSLACG00000011311	SUGP1	100	62.205	ENSAMXG00000002872	SUGP1	100	62.362	Astyanax_mexicanus
ENSLACG00000011311	SUGP1	100	69.267	ENSBTAG00000006116	SUGP1	99	68.799	Bos_taurus
ENSLACG00000011311	SUGP1	100	70.762	ENSCJAG00000005755	SUGP1	99	70.140	Callithrix_jacchus
ENSLACG00000011311	SUGP1	100	70.249	ENSCAFG00000014314	SUGP1	99	70.405	Canis_familiaris
ENSLACG00000011311	SUGP1	100	70.249	ENSCAFG00020012508	SUGP1	99	70.405	Canis_lupus_dingo
ENSLACG00000011311	SUGP1	100	68.896	ENSCHIG00000024169	SUGP1	99	68.799	Capra_hircus
ENSLACG00000011311	SUGP1	100	70.186	ENSTSYG00000005329	SUGP1	99	70.031	Carlito_syrichta
ENSLACG00000011311	SUGP1	99	67.079	ENSCAPG00000010672	SUGP1	99	67.757	Cavia_aperea
ENSLACG00000011311	SUGP1	100	67.584	ENSCPOG00000007797	SUGP1	99	67.431	Cavia_porcellus
ENSLACG00000011311	SUGP1	100	70.295	ENSCCAG00000024177	SUGP1	99	70.376	Cebus_capucinus
ENSLACG00000011311	SUGP1	100	70.607	ENSCATG00000033059	SUGP1	99	70.451	Cercocebus_atys
ENSLACG00000011311	SUGP1	96	51.882	ENSCATG00000033580	-	97	50.643	Cercocebus_atys
ENSLACG00000011311	SUGP1	100	68.168	ENSCLAG00000003512	SUGP1	99	68.266	Chinchilla_lanigera
ENSLACG00000011311	SUGP1	100	74.894	ENSCSAG00000005148	SUGP1	100	74.468	Chlorocebus_sabaeus
ENSLACG00000011311	SUGP1	99	72.800	ENSCPBG00000012455	SUGP1	99	73.151	Chrysemys_picta_bellii
ENSLACG00000011311	SUGP1	100	70.762	ENSCANG00000035428	SUGP1	99	70.607	Colobus_angolensis_palliatus
ENSLACG00000011311	SUGP1	100	68.576	ENSCGRG00001021250	Sugp1	99	68.118	Cricetulus_griseus_chok1gshd
ENSLACG00000011311	SUGP1	99	68.858	ENSCGRG00000014265	Sugp1	99	68.182	Cricetulus_griseus_crigri
ENSLACG00000011311	SUGP1	100	63.349	ENSCSEG00000014421	SUGP1	100	63.981	Cynoglossus_semilaevis
ENSLACG00000011311	SUGP1	100	60.248	ENSCVAG00000004765	SUGP1	100	59.750	Cyprinodon_variegatus
ENSLACG00000011311	SUGP1	51	48.519	ENSDARG00000075936	sugp1	100	48.148	Danio_rerio
ENSLACG00000011311	SUGP1	81	55.797	ENSEBUG00000016994	SUGP1	91	55.596	Eptatretus_burgeri
ENSLACG00000011311	SUGP1	99	70.505	ENSEASG00005006593	SUGP1	95	70.932	Equus_asinus_asinus
ENSLACG00000011311	SUGP1	100	70.203	ENSECAG00000013871	SUGP1	99	70.625	Equus_caballus
ENSLACG00000011311	SUGP1	99	61.682	ENSELUG00000001358	SUGP1	100	61.094	Esox_lucius
ENSLACG00000011311	SUGP1	100	70.093	ENSFCAG00000009779	SUGP1	99	70.249	Felis_catus
ENSLACG00000011311	SUGP1	73	74.153	ENSFALG00000010583	-	100	73.093	Ficedula_albicollis
ENSLACG00000011311	SUGP1	100	68.539	ENSFDAG00000014261	SUGP1	99	67.453	Fukomys_damarensis
ENSLACG00000011311	SUGP1	98	59.498	ENSFHEG00000002556	SUGP1	99	59.184	Fundulus_heteroclitus
ENSLACG00000011311	SUGP1	96	62.623	ENSGMOG00000012159	SUGP1	96	62.131	Gadus_morhua
ENSLACG00000011311	SUGP1	97	90.189	ENSGALG00000042132	SUGP1	86	90.189	Gallus_gallus
ENSLACG00000011311	SUGP1	100	60.154	ENSGAFG00000008550	SUGP1	100	59.505	Gambusia_affinis
ENSLACG00000011311	SUGP1	96	61.003	ENSGACG00000015222	SUGP1	95	60.454	Gasterosteus_aculeatus
ENSLACG00000011311	SUGP1	99	73.280	ENSGAGG00000022764	SUGP1	99	73.633	Gopherus_agassizii
ENSLACG00000011311	SUGP1	100	70.762	ENSGGOG00000002984	SUGP1	99	70.762	Gorilla_gorilla
ENSLACG00000011311	SUGP1	96	62.500	ENSHBUG00000022000	SUGP1	100	61.275	Haplochromis_burtoni
ENSLACG00000011311	SUGP1	100	69.325	ENSHGLG00000004593	SUGP1	99	69.195	Heterocephalus_glaber_female
ENSLACG00000011311	SUGP1	100	69.814	ENSHGLG00100006097	SUGP1	99	69.195	Heterocephalus_glaber_male
ENSLACG00000011311	SUGP1	98	59.516	ENSHCOG00000001195	SUGP1	96	64.672	Hippocampus_comes
ENSLACG00000011311	SUGP1	100	63.608	ENSIPUG00000006883	sugp1	100	63.608	Ictalurus_punctatus
ENSLACG00000011311	SUGP1	100	70.186	ENSSTOG00000001020	SUGP1	99	70.652	Ictidomys_tridecemlineatus
ENSLACG00000011311	SUGP1	100	68.274	ENSJJAG00000013477	Sugp1	99	67.901	Jaculus_jaculus
ENSLACG00000011311	SUGP1	98	60.697	ENSKMAG00000006042	SUGP1	99	60.380	Kryptolebias_marmoratus
ENSLACG00000011311	SUGP1	99	60.157	ENSLBEG00000000335	SUGP1	99	59.843	Labrus_bergylta
ENSLACG00000011311	SUGP1	88	67.965	ENSLOCG00000005094	SUGP1	99	67.314	Lepisosteus_oculatus
ENSLACG00000011311	SUGP1	100	69.136	ENSLAFG00000017363	SUGP1	99	70.517	Loxodonta_africana
ENSLACG00000011311	SUGP1	100	70.607	ENSMFAG00000031157	SUGP1	99	70.451	Macaca_fascicularis
ENSLACG00000011311	SUGP1	96	71.845	ENSMMUG00000028834	SUGP1	99	71.683	Macaca_mulatta
ENSLACG00000011311	SUGP1	100	70.607	ENSMNEG00000042010	SUGP1	99	70.451	Macaca_nemestrina
ENSLACG00000011311	SUGP1	99	51.587	ENSMNEG00000035574	-	100	51.659	Macaca_nemestrina
ENSLACG00000011311	SUGP1	100	71.505	ENSMLEG00000043364	SUGP1	99	70.350	Mandrillus_leucophaeus
ENSLACG00000011311	SUGP1	100	61.526	ENSMAMG00000010022	SUGP1	100	61.059	Mastacembelus_armatus
ENSLACG00000011311	SUGP1	96	62.500	ENSMZEG00005025588	SUGP1	100	61.275	Maylandia_zebra
ENSLACG00000011311	SUGP1	97	62.437	ENSMAUG00000016683	Sugp1	94	67.905	Mesocricetus_auratus
ENSLACG00000011311	SUGP1	100	68.731	ENSMOCG00000014670	Sugp1	99	68.421	Microtus_ochrogaster
ENSLACG00000011311	SUGP1	96	60.261	ENSMMOG00000010675	SUGP1	96	59.380	Mola_mola
ENSLACG00000011311	SUGP1	100	72.214	ENSMODG00000007089	SUGP1	99	72.214	Monodelphis_domestica
ENSLACG00000011311	SUGP1	100	60.093	ENSMALG00000020217	SUGP1	100	59.317	Monopterus_albus
ENSLACG00000011311	SUGP1	100	68.634	MGP_CAROLIEiJ_G0031126	Sugp1	99	68.323	Mus_caroli
ENSLACG00000011311	SUGP1	100	68.789	ENSMUSG00000011306	Sugp1	99	68.478	Mus_musculus
ENSLACG00000011311	SUGP1	100	68.634	MGP_PahariEiJ_G0021591	Sugp1	99	68.323	Mus_pahari
ENSLACG00000011311	SUGP1	100	68.944	MGP_SPRETEiJ_G0032244	Sugp1	99	68.634	Mus_spretus
ENSLACG00000011311	SUGP1	100	70.607	ENSMPUG00000015404	SUGP1	99	70.717	Mustela_putorius_furo
ENSLACG00000011311	SUGP1	100	69.362	ENSMLUG00000017360	SUGP1	99	68.799	Myotis_lucifugus
ENSLACG00000011311	SUGP1	89	71.030	ENSNGAG00000018965	Sugp1	98	70.855	Nannospalax_galili
ENSLACG00000011311	SUGP1	50	50.199	ENSNBRG00000019759	sugp1	80	51.394	Neolamprologus_brichardi
ENSLACG00000011311	SUGP1	100	65.367	ENSNLEG00000006236	SUGP1	99	64.743	Nomascus_leucogenys
ENSLACG00000011311	SUGP1	88	73.043	ENSMEUG00000013320	SUGP1	81	73.043	Notamacropus_eugenii
ENSLACG00000011311	SUGP1	100	65.523	ENSOPRG00000004247	SUGP1	99	64.844	Ochotona_princeps
ENSLACG00000011311	SUGP1	100	69.099	ENSODEG00000011538	SUGP1	99	69.099	Octodon_degus
ENSLACG00000011311	SUGP1	100	61.550	ENSONIG00000010178	SUGP1	100	61.526	Oreochromis_niloticus
ENSLACG00000011311	SUGP1	100	61.085	ENSORLG00000015411	SUGP1	100	60.930	Oryzias_latipes
ENSLACG00000011311	SUGP1	100	60.930	ENSORLG00020017049	SUGP1	100	60.775	Oryzias_latipes_hni
ENSLACG00000011311	SUGP1	100	60.620	ENSORLG00015016798	SUGP1	100	60.465	Oryzias_latipes_hsok
ENSLACG00000011311	SUGP1	100	60.305	ENSOMEG00000021298	SUGP1	100	60.620	Oryzias_melastigma
ENSLACG00000011311	SUGP1	100	69.673	ENSOGAG00000009975	-	99	69.984	Otolemur_garnettii
ENSLACG00000011311	SUGP1	100	66.304	ENSOARG00000008152	SUGP1	99	65.994	Ovis_aries
ENSLACG00000011311	SUGP1	100	70.762	ENSPPAG00000037102	SUGP1	99	70.607	Pan_paniscus
ENSLACG00000011311	SUGP1	100	70.093	ENSPPRG00000000880	SUGP1	99	70.249	Panthera_pardus
ENSLACG00000011311	SUGP1	100	70.203	ENSPTIG00000013061	SUGP1	99	70.359	Panthera_tigris_altaica
ENSLACG00000011311	SUGP1	100	70.762	ENSPTRG00000010737	SUGP1	99	70.607	Pan_troglodytes
ENSLACG00000011311	SUGP1	100	70.451	ENSPANG00000014398	SUGP1	99	70.607	Papio_anubis
ENSLACG00000011311	SUGP1	96	54.276	ENSPANG00000008180	-	99	52.778	Papio_anubis
ENSLACG00000011311	SUGP1	99	62.539	ENSPKIG00000010747	SUGP1	99	63.175	Paramormyrops_kingsleyae
ENSLACG00000011311	SUGP1	99	73.183	ENSPSIG00000016889	SUGP1	99	74.457	Pelodiscus_sinensis
ENSLACG00000011311	SUGP1	96	61.857	ENSPMGG00000017278	SUGP1	95	61.897	Periophthalmus_magnuspinnatus
ENSLACG00000011311	SUGP1	100	68.944	ENSPEMG00000009253	Sugp1	99	68.858	Peromyscus_maniculatus_bairdii
ENSLACG00000011311	SUGP1	100	60.031	ENSPFOG00000015785	SUGP1	100	59.414	Poecilia_formosa
ENSLACG00000011311	SUGP1	100	60.031	ENSPLAG00000010995	SUGP1	100	59.414	Poecilia_latipinna
ENSLACG00000011311	SUGP1	100	59.754	ENSPMEG00000000020	SUGP1	100	59.414	Poecilia_mexicana
ENSLACG00000011311	SUGP1	99	58.796	ENSPREG00000017966	SUGP1	98	58.970	Poecilia_reticulata
ENSLACG00000011311	SUGP1	100	66.927	ENSPPYG00000009766	SUGP1	99	66.978	Pongo_abelii
ENSLACG00000011311	SUGP1	56	94.776	ENSPCAG00000014760	SUGP1	57	94.776	Procavia_capensis
ENSLACG00000011311	SUGP1	100	70.451	ENSPCOG00000017524	SUGP1	99	70.295	Propithecus_coquereli
ENSLACG00000011311	SUGP1	100	69.579	ENSPVAG00000017451	SUGP1	99	69.579	Pteropus_vampyrus
ENSLACG00000011311	SUGP1	100	63.893	ENSPNAG00000004723	SUGP1	100	63.108	Pygocentrus_nattereri
ENSLACG00000011311	SUGP1	100	68.478	ENSRNOG00000052111	Sugp1	99	68.372	Rattus_norvegicus
ENSLACG00000011311	SUGP1	100	62.963	ENSRBIG00000035555	SUGP1	99	62.654	Rhinopithecus_bieti
ENSLACG00000011311	SUGP1	98	54.943	ENSRBIG00000037600	-	97	53.376	Rhinopithecus_bieti
ENSLACG00000011311	SUGP1	100	70.762	ENSRROG00000030048	SUGP1	99	71.845	Rhinopithecus_roxellana
ENSLACG00000011311	SUGP1	99	54.531	ENSRROG00000031017	-	100	53.100	Rhinopithecus_roxellana
ENSLACG00000011311	SUGP1	100	70.295	ENSSBOG00000020160	SUGP1	99	70.295	Saimiri_boliviensis_boliviensis
ENSLACG00000011311	SUGP1	100	71.987	ENSSHAG00000012361	SUGP1	100	72.188	Sarcophilus_harrisii
ENSLACG00000011311	SUGP1	99	64.715	ENSSFOG00015010075	sugp1	99	64.553	Scleropages_formosus
ENSLACG00000011311	SUGP1	100	61.154	ENSSMAG00000002495	SUGP1	100	60.842	Scophthalmus_maximus
ENSLACG00000011311	SUGP1	100	62.384	ENSSDUG00000016002	SUGP1	100	60.991	Seriola_dumerili
ENSLACG00000011311	SUGP1	100	62.384	ENSSLDG00000011109	SUGP1	100	60.991	Seriola_lalandi_dorsalis
ENSLACG00000011311	SUGP1	96	76.549	ENSSPUG00000007840	SUGP1	96	76.549	Sphenodon_punctatus
ENSLACG00000011311	SUGP1	100	62.154	ENSSPAG00000023010	SUGP1	100	62.675	Stegastes_partitus
ENSLACG00000011311	SUGP1	100	68.643	ENSSSCG00000036970	SUGP1	99	68.652	Sus_scrofa
ENSLACG00000011311	SUGP1	51	63.860	ENSTGUG00000013941	-	99	63.860	Taeniopygia_guttata
ENSLACG00000011311	SUGP1	100	59.683	ENSTRUG00000009724	SUGP1	100	59.206	Takifugu_rubripes
ENSLACG00000011311	SUGP1	96	62.729	ENSTNIG00000015312	SUGP1	99	62.521	Tetraodon_nigroviridis
ENSLACG00000011311	SUGP1	71	96.296	ENSTBEG00000016501	-	71	96.296	Tupaia_belangeri
ENSLACG00000011311	SUGP1	100	69.362	ENSTTRG00000009868	SUGP1	99	69.267	Tursiops_truncatus
ENSLACG00000011311	SUGP1	100	68.536	ENSUAMG00000000010	-	99	68.224	Ursus_americanus
ENSLACG00000011311	SUGP1	92	68.528	ENSUMAG00000006358	SUGP1	99	68.190	Ursus_maritimus
ENSLACG00000011311	SUGP1	79	65.301	ENSVPAG00000002122	SUGP1	86	64.819	Vicugna_pacos
ENSLACG00000011311	SUGP1	100	70.093	ENSVVUG00000007569	SUGP1	99	70.249	Vulpes_vulpes
ENSLACG00000011311	SUGP1	100	65.823	ENSXETG00000013044	sugp1	100	65.660	Xenopus_tropicalis
ENSLACG00000011311	SUGP1	99	61.611	ENSXCOG00000008238	SUGP1	98	60.348	Xiphophorus_couchianus
ENSLACG00000011311	SUGP1	100	60.308	ENSXMAG00000019331	SUGP1	100	59.505	Xiphophorus_maculatus