EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000011328 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 742 bases
Position: chrJH127074.1:591220-591961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012866	RVT_1	PF00078.27	7.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012960	-	666	-	ENSLACP00000012866	222 (aa)	-	H3AT95

Gene Model

Click here to download ENSLACG00000011328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000011328	-	64	38.000	ENSLACG00000006250	-	87	38.000
ENSLACG00000011328	-	73	38.596	ENSLACG00000016475	-	100	38.596
ENSLACG00000011328	-	91	30.698	ENSLACG00000004732	-	63	30.698
ENSLACG00000011328	-	71	36.585	ENSLACG00000002617	-	94	36.585
ENSLACG00000011328	-	65	38.667	ENSLACG00000010373	-	60	38.667
ENSLACG00000011328	-	83	69.792	ENSLACG00000005904	-	67	69.792
ENSLACG00000011328	-	50	33.333	ENSLACG00000013054	-	88	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011328	-	99	42.035	ENSAPOG00000011439	-	70	42.035	Acanthochromis_polyacanthus
ENSLACG00000011328	-	91	36.019	ENSACLG00000002678	-	50	36.019	Astatotilapia_calliptera
ENSLACG00000011328	-	97	36.000	ENSACLG00000009390	-	61	36.444	Astatotilapia_calliptera
ENSLACG00000011328	-	87	37.313	ENSEBUG00000007520	-	79	37.313	Eptatretus_burgeri
ENSLACG00000011328	-	93	34.722	ENSIPUG00000002895	-	52	34.722	Ictalurus_punctatus
ENSLACG00000011328	-	94	40.465	ENSORLG00000028614	-	59	40.465	Oryzias_latipes
ENSLACG00000011328	-	80	41.081	ENSORLG00020022076	-	50	41.081	Oryzias_latipes_hni
ENSLACG00000011328	-	86	38.191	ENSORLG00015020536	-	54	38.191	Oryzias_latipes_hsok
ENSLACG00000011328	-	88	35.784	ENSPSIG00000000968	-	66	35.784	Pelodiscus_sinensis
ENSLACG00000011328	-	98	35.714	ENSPFOG00000023854	-	51	35.714	Poecilia_formosa
ENSLACG00000011328	-	95	36.239	ENSPNYG00000002366	-	69	36.239	Pundamilia_nyererei
ENSLACG00000011328	-	97	37.668	ENSXMAG00000024510	-	61	37.668	Xiphophorus_maculatus