EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000011380 (Gene tree)
Gene ID: 102357106
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 11716 bases
Position: chrJH127154.1:595956-607671
Accession: 102357106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012922	MMR_HSR1	PF01926.23	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013017	-	654	XM_006000277	ENSLACP00000012922	217 (aa)	XP_006000339	H3ATF1

Gene Model

Click here to download ENSLACG00000011380's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000011380	rab11al	76	35.673	ENSLACG00000002523	RAB29	83	35.673
ENSLACG00000011380	rab11al	72	36.478	ENSLACG00000003722	rabl2	69	36.478
ENSLACG00000011380	rab11al	98	66.509	ENSLACG00000011157	RAB25	99	66.509
ENSLACG00000011380	rab11al	93	33.010	ENSLACG00000013980	rab41	91	33.010
ENSLACG00000011380	rab11al	80	40.782	ENSLACG00000008103	-	98	40.782
ENSLACG00000011380	rab11al	74	35.185	ENSLACG00000010042	-	84	32.955
ENSLACG00000011380	rab11al	95	45.070	ENSLACG00000012717	RAB1B	99	45.070
ENSLACG00000011380	rab11al	73	53.165	ENSLACG00000014446	RAB2B	96	53.165
ENSLACG00000011380	rab11al	75	32.317	ENSLACG00000012088	rheb	89	32.317
ENSLACG00000011380	rab11al	81	50.857	ENSLACG00000011181	RAB14	81	50.575
ENSLACG00000011380	rab11al	71	37.013	ENSLACG00000005168	RAB6A	74	37.013
ENSLACG00000011380	rab11al	74	30.675	ENSLACG00000003581	rasd3	78	30.675
ENSLACG00000011380	rab11al	74	46.296	ENSLACG00000009310	rab18a	78	46.296
ENSLACG00000011380	rab11al	69	32.000	ENSLACG00000017138	RRAS	99	32.370
ENSLACG00000011380	rab11al	73	37.342	ENSLACG00000016518	-	50	37.342
ENSLACG00000011380	rab11al	56	48.760	ENSLACG00000018444	RAB35	99	35.185
ENSLACG00000011380	rab11al	78	88.824	ENSLACG00000016974	RAB11B	99	88.824
ENSLACG00000011380	rab11al	57	37.008	ENSLACG00000010885	-	82	37.008
ENSLACG00000011380	rab11al	69	30.323	ENSLACG00000014985	RAP2B	89	31.737
ENSLACG00000011380	rab11al	77	44.311	ENSLACG00000006407	RAB30	82	44.311
ENSLACG00000011380	rab11al	79	40.462	ENSLACG00000012674	si:dkey-34d22.5	82	40.462
ENSLACG00000011380	rab11al	95	40.385	ENSLACG00000002332	-	97	40.385
ENSLACG00000011380	rab11al	54	31.405	ENSLACG00000002695	ARL4A	57	31.405
ENSLACG00000011380	rab11al	77	44.379	ENSLACG00000011256	rab18b	82	44.379
ENSLACG00000011380	rab11al	87	30.000	ENSLACG00000013122	RRAS2	92	30.693
ENSLACG00000011380	rab11al	76	41.818	ENSLACG00000010461	RAB12	66	41.818
ENSLACG00000011380	rab11al	75	35.882	ENSLACG00000018427	HRAS	86	36.747
ENSLACG00000011380	rab11al	77	33.529	ENSLACG00000018428	NRAS	94	34.615
ENSLACG00000011380	rab11al	86	31.579	ENSLACG00000016958	-	88	31.579
ENSLACG00000011380	rab11al	99	78.341	ENSLACG00000016857	-	99	78.341
ENSLACG00000011380	rab11al	86	37.245	ENSLACG00000013571	RAB33B	84	37.245
ENSLACG00000011380	rab11al	71	42.500	ENSLACG00000017891	RAB9B	75	42.500
ENSLACG00000011380	rab11al	56	37.190	ENSLACG00000018793	RAN	82	37.190
ENSLACG00000011380	rab11al	73	38.650	ENSLACG00000015770	RAB7A	78	38.650
ENSLACG00000011380	rab11al	95	37.143	ENSLACG00000012755	-	98	37.143
ENSLACG00000011380	rab11al	58	31.008	ENSLACG00000003905	ARL4D	63	31.008
ENSLACG00000011380	rab11al	93	44.059	ENSLACG00000004663	RAB5A	89	44.059
ENSLACG00000011380	rab11al	94	41.748	ENSLACG00000016074	RAB39B	96	41.748
ENSLACG00000011380	rab11al	98	45.540	ENSLACG00000012869	RAB1A	100	45.540
ENSLACG00000011380	rab11al	76	53.012	ENSLACG00000012521	RAB2A	78	53.012
ENSLACG00000011380	rab11al	65	35.664	ENSLACG00000004025	RAB23	68	35.185
ENSLACG00000011380	rab11al	75	40.741	ENSLACG00000022111	-	81	40.741
ENSLACG00000011380	rab11al	73	39.877	ENSLACG00000008809	zgc:100918	79	39.877
ENSLACG00000011380	rab11al	72	42.038	ENSLACG00000007092	RAB22A	81	42.038
ENSLACG00000011380	rab11al	93	33.659	ENSLACG00000011557	zgc:101559	85	33.659
ENSLACG00000011380	rab11al	99	78.605	ENSLACG00000012184	RAB11A	99	78.605
ENSLACG00000011380	rab11al	70	36.364	ENSLACG00000017464	KRAS	86	37.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011380	rab11al	99	80.000	ENSAPOG00000008251	rab11al	99	80.000	Acanthochromis_polyacanthus
ENSLACG00000011380	rab11al	99	80.000	ENSACIG00000017403	rab11al	99	80.000	Amphilophus_citrinellus
ENSLACG00000011380	rab11al	99	79.535	ENSAOCG00000015678	rab11al	99	79.535	Amphiprion_ocellaris
ENSLACG00000011380	rab11al	99	79.535	ENSAPEG00000022135	rab11al	99	79.535	Amphiprion_percula
ENSLACG00000011380	rab11al	99	78.605	ENSATEG00000006156	rab11al	99	78.605	Anabas_testudineus
ENSLACG00000011380	rab11al	99	80.465	ENSACLG00000010268	rab11al	99	80.465	Astatotilapia_calliptera
ENSLACG00000011380	rab11al	93	75.743	ENSAMXG00000024632	rab11al	92	75.743	Astyanax_mexicanus
ENSLACG00000011380	rab11al	93	80.198	ENSCPBG00000025819	-	99	80.198	Chrysemys_picta_bellii
ENSLACG00000011380	rab11al	99	80.465	ENSCSEG00000011996	rab11al	99	80.465	Cynoglossus_semilaevis
ENSLACG00000011380	rab11al	99	80.000	ENSCVAG00000020016	rab11al	99	80.000	Cyprinodon_variegatus
ENSLACG00000011380	rab11al	99	82.326	ENSDARG00000014340	rab11al	99	82.326	Danio_rerio
ENSLACG00000011380	rab11al	99	82.326	ENSELUG00000012035	rab11al	99	82.326	Esox_lucius
ENSLACG00000011380	rab11al	99	81.481	ENSFALG00000002594	-	92	81.481	Ficedula_albicollis
ENSLACG00000011380	rab11al	95	80.676	ENSFHEG00000000832	rab11al	99	80.676	Fundulus_heteroclitus
ENSLACG00000011380	rab11al	93	78.607	ENSGMOG00000006450	rab11al	99	78.607	Gadus_morhua
ENSLACG00000011380	rab11al	99	80.093	ENSGALG00000037802	-	50	80.093	Gallus_gallus
ENSLACG00000011380	rab11al	99	80.465	ENSGAFG00000021725	rab11al	99	80.465	Gambusia_affinis
ENSLACG00000011380	rab11al	99	79.070	ENSGACG00000013259	rab11al	99	79.070	Gasterosteus_aculeatus
ENSLACG00000011380	rab11al	99	80.930	ENSGAGG00000020702	-	99	80.930	Gopherus_agassizii
ENSLACG00000011380	rab11al	99	80.465	ENSHBUG00000009333	rab11al	99	80.465	Haplochromis_burtoni
ENSLACG00000011380	rab11al	99	78.605	ENSHCOG00000000232	rab11al	99	78.605	Hippocampus_comes
ENSLACG00000011380	rab11al	99	80.465	ENSIPUG00000006091	RAB11A	99	80.465	Ictalurus_punctatus
ENSLACG00000011380	rab11al	99	79.070	ENSKMAG00000015516	rab11al	99	79.070	Kryptolebias_marmoratus
ENSLACG00000011380	rab11al	99	79.070	ENSLBEG00000016417	rab11al	99	79.070	Labrus_bergylta
ENSLACG00000011380	rab11al	99	82.710	ENSLOCG00000008865	rab11al	99	82.710	Lepisosteus_oculatus
ENSLACG00000011380	rab11al	99	78.140	ENSMAMG00000010278	rab11al	99	78.140	Mastacembelus_armatus
ENSLACG00000011380	rab11al	99	80.465	ENSMZEG00005017514	rab11al	99	80.465	Maylandia_zebra
ENSLACG00000011380	rab11al	74	88.125	ENSMGAG00000004720	-	95	88.125	Meleagris_gallopavo
ENSLACG00000011380	rab11al	95	73.832	ENSMMOG00000017117	rab11al	96	73.832	Mola_mola
ENSLACG00000011380	rab11al	99	79.070	ENSMALG00000004093	rab11al	99	79.070	Monopterus_albus
ENSLACG00000011380	rab11al	99	80.465	ENSNBRG00000005116	rab11al	99	80.465	Neolamprologus_brichardi
ENSLACG00000011380	rab11al	99	80.000	ENSONIG00000002281	rab11al	99	80.000	Oreochromis_niloticus
ENSLACG00000011380	rab11al	99	80.000	ENSORLG00000016126	rab11al	99	80.000	Oryzias_latipes
ENSLACG00000011380	rab11al	99	80.000	ENSORLG00020013747	rab11al	99	80.000	Oryzias_latipes_hni
ENSLACG00000011380	rab11al	99	80.000	ENSORLG00015019591	rab11al	99	80.000	Oryzias_latipes_hsok
ENSLACG00000011380	rab11al	99	79.535	ENSOMEG00000020271	rab11al	99	79.535	Oryzias_melastigma
ENSLACG00000011380	rab11al	99	82.710	ENSPKIG00000020893	rab11al	99	82.710	Paramormyrops_kingsleyae
ENSLACG00000011380	rab11al	99	81.395	ENSPSIG00000013143	-	99	81.395	Pelodiscus_sinensis
ENSLACG00000011380	rab11al	99	78.972	ENSPMGG00000004220	rab11al	89	91.045	Periophthalmus_magnuspinnatus
ENSLACG00000011380	rab11al	99	79.535	ENSPFOG00000011316	rab11al	99	79.535	Poecilia_formosa
ENSLACG00000011380	rab11al	99	79.535	ENSPLAG00000007986	rab11al	99	79.535	Poecilia_latipinna
ENSLACG00000011380	rab11al	99	79.535	ENSPMEG00000000804	rab11al	99	79.535	Poecilia_mexicana
ENSLACG00000011380	rab11al	99	79.535	ENSPREG00000017324	rab11al	99	79.535	Poecilia_reticulata
ENSLACG00000011380	rab11al	99	80.465	ENSPNYG00000018244	rab11al	99	80.465	Pundamilia_nyererei
ENSLACG00000011380	rab11al	99	80.465	ENSPNAG00000029085	rab11al	99	80.465	Pygocentrus_nattereri
ENSLACG00000011380	rab11al	99	82.243	ENSSFOG00015008618	rab11al	99	82.243	Scleropages_formosus
ENSLACG00000011380	rab11al	99	79.070	ENSSMAG00000016206	rab11al	99	79.070	Scophthalmus_maximus
ENSLACG00000011380	rab11al	99	79.070	ENSSDUG00000006278	rab11al	99	79.070	Seriola_dumerili
ENSLACG00000011380	rab11al	99	79.070	ENSSLDG00000012116	rab11al	99	79.070	Seriola_lalandi_dorsalis
ENSLACG00000011380	rab11al	97	80.189	ENSSPUG00000002526	-	98	80.189	Sphenodon_punctatus
ENSLACG00000011380	rab11al	99	79.070	ENSSPAG00000012044	rab11al	99	79.070	Stegastes_partitus
ENSLACG00000011380	rab11al	93	82.673	ENSTGUG00000003680	-	99	82.673	Taeniopygia_guttata
ENSLACG00000011380	rab11al	98	80.282	ENSTRUG00000007556	rab11al	92	92.908	Takifugu_rubripes
ENSLACG00000011380	rab11al	99	80.000	ENSXCOG00000004226	rab11al	99	80.000	Xiphophorus_couchianus
ENSLACG00000011380	rab11al	99	80.000	ENSXMAG00000027071	rab11al	99	80.000	Xiphophorus_maculatus