EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011400 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH3
Alias: FLJ12455|GPATC3
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 9886 bases
Position: chrJH126645.1:597907-607792
Accession: 102365981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012944	G-patch	PF01585.23	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013039	GPATCH3-201	3260	XM_005991014	ENSLACP00000012944	648 (aa)	XP_005991076	H3ATH3

Gene Model

Click here to download ENSLACG00000011400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011400	GPATCH3	70	74.771	ENSG00000198746	GPATCH3	100	64.844	Homo_sapiens
ENSLACG00000011400	GPATCH3	71	74.519	ENSAPOG00000001212	gpatch3	91	73.364	Acanthochromis_polyacanthus
ENSLACG00000011400	GPATCH3	70	76.744	ENSAMEG00000010801	GPATCH3	90	74.667	Ailuropoda_melanoleuca
ENSLACG00000011400	GPATCH3	70	74.634	ENSAOCG00000019352	gpatch3	90	73.832	Amphiprion_ocellaris
ENSLACG00000011400	GPATCH3	70	74.634	ENSAPEG00000018926	gpatch3	90	73.832	Amphiprion_percula
ENSLACG00000011400	GPATCH3	77	73.171	ENSATEG00000023759	gpatch3	89	72.430	Anabas_testudineus
ENSLACG00000011400	GPATCH3	54	81.944	ENSAPLG00000010745	GPATCH3	99	81.944	Anas_platyrhynchos
ENSLACG00000011400	GPATCH3	80	76.786	ENSACAG00000016709	GPATCH3	89	76.786	Anolis_carolinensis
ENSLACG00000011400	GPATCH3	70	74.771	ENSANAG00000035944	GPATCH3	91	73.991	Aotus_nancymaae
ENSLACG00000011400	GPATCH3	74	74.146	ENSACLG00000012807	gpatch3	89	73.364	Astatotilapia_calliptera
ENSLACG00000011400	GPATCH3	75	72.300	ENSAMXG00000034582	gpatch3	95	72.300	Astyanax_mexicanus
ENSLACG00000011400	GPATCH3	80	72.646	ENSBTAG00000014849	GPATCH3	90	72.646	Bos_taurus
ENSLACG00000011400	GPATCH3	67	44.130	WBGene00019467	K07B1.7	86	44.269	Caenorhabditis_elegans
ENSLACG00000011400	GPATCH3	71	75.566	ENSCJAG00000010000	GPATCH3	90	74.123	Callithrix_jacchus
ENSLACG00000011400	GPATCH3	80	74.888	ENSCAFG00000012265	GPATCH3	91	74.888	Canis_familiaris
ENSLACG00000011400	GPATCH3	80	74.888	ENSCAFG00020021640	GPATCH3	91	74.888	Canis_lupus_dingo
ENSLACG00000011400	GPATCH3	78	72.197	ENSCHIG00000024245	GPATCH3	89	72.197	Capra_hircus
ENSLACG00000011400	GPATCH3	70	76.147	ENSTSYG00000011753	GPATCH3	90	75.336	Carlito_syrichta
ENSLACG00000011400	GPATCH3	71	76.364	ENSCPOG00000010404	GPATCH3	92	75.785	Cavia_porcellus
ENSLACG00000011400	GPATCH3	70	74.312	ENSCCAG00000030482	GPATCH3	91	73.543	Cebus_capucinus
ENSLACG00000011400	GPATCH3	70	75.229	ENSCATG00000033598	GPATCH3	90	73.778	Cercocebus_atys
ENSLACG00000011400	GPATCH3	80	75.785	ENSCLAG00000012064	GPATCH3	92	75.785	Chinchilla_lanigera
ENSLACG00000011400	GPATCH3	79	78.924	ENSCPBG00000024968	GPATCH3	90	77.729	Chrysemys_picta_bellii
ENSLACG00000011400	GPATCH3	70	74.312	ENSCANG00000036795	GPATCH3	90	72.889	Colobus_angolensis_palliatus
ENSLACG00000011400	GPATCH3	78	75.799	ENSCGRG00001002930	Gpatch3	95	75.336	Cricetulus_griseus_chok1gshd
ENSLACG00000011400	GPATCH3	78	75.799	ENSCGRG00000004699	Gpatch3	95	75.336	Cricetulus_griseus_crigri
ENSLACG00000011400	GPATCH3	79	73.364	ENSCSEG00000005277	gpatch3	91	73.364	Cynoglossus_semilaevis
ENSLACG00000011400	GPATCH3	79	71.875	ENSCVAG00000000827	gpatch3	93	71.818	Cyprinodon_variegatus
ENSLACG00000011400	GPATCH3	98	48.235	ENSDARG00000052747	gpatch3	69	69.863	Danio_rerio
ENSLACG00000011400	GPATCH3	72	75.342	ENSDNOG00000016999	GPATCH3	94	74.888	Dasypus_novemcinctus
ENSLACG00000011400	GPATCH3	77	65.258	ENSEBUG00000013911	gpatch3	81	65.258	Eptatretus_burgeri
ENSLACG00000011400	GPATCH3	80	74.439	ENSEASG00005008636	GPATCH3	89	74.439	Equus_asinus_asinus
ENSLACG00000011400	GPATCH3	80	74.439	ENSECAG00000007653	GPATCH3	89	74.439	Equus_caballus
ENSLACG00000011400	GPATCH3	80	71.493	ENSELUG00000000963	gpatch3	91	71.493	Esox_lucius
ENSLACG00000011400	GPATCH3	80	74.222	ENSFCAG00000012819	GPATCH3	90	74.888	Felis_catus
ENSLACG00000011400	GPATCH3	80	73.991	ENSFDAG00000016270	GPATCH3	90	73.333	Fukomys_damarensis
ENSLACG00000011400	GPATCH3	79	71.362	ENSFHEG00000015264	gpatch3	95	71.362	Fundulus_heteroclitus
ENSLACG00000011400	GPATCH3	80	66.514	ENSGMOG00000000991	gpatch3	93	66.514	Gadus_morhua
ENSLACG00000011400	GPATCH3	72	79.018	ENSGALG00000000881	GPATCH3	88	79.018	Gallus_gallus
ENSLACG00000011400	GPATCH3	79	70.561	ENSGAFG00000002531	gpatch3	94	70.561	Gambusia_affinis
ENSLACG00000011400	GPATCH3	79	71.495	ENSGACG00000007199	gpatch3	91	71.495	Gasterosteus_aculeatus
ENSLACG00000011400	GPATCH3	79	77.578	ENSGAGG00000023286	GPATCH3	90	76.419	Gopherus_agassizii
ENSLACG00000011400	GPATCH3	70	74.312	ENSGGOG00000015305	GPATCH3	90	73.543	Gorilla_gorilla
ENSLACG00000011400	GPATCH3	73	74.146	ENSHBUG00000020513	gpatch3	89	73.364	Haplochromis_burtoni
ENSLACG00000011400	GPATCH3	72	73.874	ENSHGLG00000012492	GPATCH3	93	73.991	Heterocephalus_glaber_female
ENSLACG00000011400	GPATCH3	72	73.874	ENSHGLG00100016909	GPATCH3	93	73.991	Heterocephalus_glaber_male
ENSLACG00000011400	GPATCH3	73	75.610	ENSHCOG00000005739	gpatch3	90	74.766	Hippocampus_comes
ENSLACG00000011400	GPATCH3	70	71.014	ENSIPUG00000007697	gpatch3	93	69.953	Ictalurus_punctatus
ENSLACG00000011400	GPATCH3	70	74.771	ENSSTOG00000015220	GPATCH3	90	73.991	Ictidomys_tridecemlineatus
ENSLACG00000011400	GPATCH3	71	74.888	ENSJJAG00000003292	Gpatch3	90	74.222	Jaculus_jaculus
ENSLACG00000011400	GPATCH3	74	71.770	ENSKMAG00000020717	gpatch3	89	70.698	Kryptolebias_marmoratus
ENSLACG00000011400	GPATCH3	71	73.558	ENSLBEG00000007046	gpatch3	90	72.430	Labrus_bergylta
ENSLACG00000011400	GPATCH3	79	73.364	ENSLOCG00000003858	gpatch3	92	73.364	Lepisosteus_oculatus
ENSLACG00000011400	GPATCH3	71	73.516	ENSLAFG00000016691	GPATCH3	92	73.094	Loxodonta_africana
ENSLACG00000011400	GPATCH3	70	75.229	ENSMFAG00000030918	GPATCH3	90	73.778	Macaca_fascicularis
ENSLACG00000011400	GPATCH3	70	75.229	ENSMMUG00000018723	GPATCH3	90	74.439	Macaca_mulatta
ENSLACG00000011400	GPATCH3	53	75.238	ENSMNEG00000033889	GPATCH3	76	75.238	Macaca_nemestrina
ENSLACG00000011400	GPATCH3	70	75.229	ENSMLEG00000033364	GPATCH3	90	73.778	Mandrillus_leucophaeus
ENSLACG00000011400	GPATCH3	79	72.897	ENSMAMG00000023975	gpatch3	89	72.897	Mastacembelus_armatus
ENSLACG00000011400	GPATCH3	74	74.146	ENSMZEG00005019731	gpatch3	89	73.364	Maylandia_zebra
ENSLACG00000011400	GPATCH3	70	76.712	ENSMAUG00000002005	Gpatch3	90	75.556	Mesocricetus_auratus
ENSLACG00000011400	GPATCH3	81	72.889	ENSMICG00000015656	GPATCH3	92	72.889	Microcebus_murinus
ENSLACG00000011400	GPATCH3	78	76.256	ENSMOCG00000022375	Gpatch3	95	75.785	Microtus_ochrogaster
ENSLACG00000011400	GPATCH3	80	77.027	ENSMODG00000014417	GPATCH3	92	77.027	Monodelphis_domestica
ENSLACG00000011400	GPATCH3	77	72.195	ENSMALG00000007586	gpatch3	93	71.495	Monopterus_albus
ENSLACG00000011400	GPATCH3	80	74.439	MGP_CAROLIEiJ_G0026594	Gpatch3	90	74.222	Mus_caroli
ENSLACG00000011400	GPATCH3	70	75.688	ENSMUSG00000028850	Gpatch3	90	74.667	Mus_musculus
ENSLACG00000011400	GPATCH3	70	75.234	MGP_PahariEiJ_G0028927	Gpatch3	90	74.009	Mus_pahari
ENSLACG00000011400	GPATCH3	70	75.688	MGP_SPRETEiJ_G0027575	Gpatch3	90	79.878	Mus_spretus
ENSLACG00000011400	GPATCH3	70	76.147	ENSMPUG00000015665	GPATCH3	90	75.336	Mustela_putorius_furo
ENSLACG00000011400	GPATCH3	71	75.113	ENSMLUG00000023528	GPATCH3	90	74.667	Myotis_lucifugus
ENSLACG00000011400	GPATCH3	70	75.342	ENSNGAG00000006821	Gpatch3	90	74.439	Nannospalax_galili
ENSLACG00000011400	GPATCH3	79	66.197	ENSNBRG00000000365	gpatch3	92	66.197	Neolamprologus_brichardi
ENSLACG00000011400	GPATCH3	66	73.853	ENSNLEG00000009387	GPATCH3	88	73.094	Nomascus_leucogenys
ENSLACG00000011400	GPATCH3	81	76.444	ENSMEUG00000003236	GPATCH3	90	76.786	Notamacropus_eugenii
ENSLACG00000011400	GPATCH3	80	71.556	ENSOPRG00000016429	GPATCH3	90	71.556	Ochotona_princeps
ENSLACG00000011400	GPATCH3	81	74.222	ENSODEG00000003292	GPATCH3	92	74.439	Octodon_degus
ENSLACG00000011400	GPATCH3	74	75.610	ENSONIG00000006771	gpatch3	90	74.766	Oreochromis_niloticus
ENSLACG00000011400	GPATCH3	74	74.457	ENSOCUG00000006411	GPATCH3	94	74.457	Oryctolagus_cuniculus
ENSLACG00000011400	GPATCH3	72	72.685	ENSORLG00000004435	gpatch3	91	71.963	Oryzias_latipes
ENSLACG00000011400	GPATCH3	72	71.963	ENSORLG00020022609	gpatch3	90	71.963	Oryzias_latipes_hni
ENSLACG00000011400	GPATCH3	80	73.148	ENSORLG00015008692	gpatch3	95	72.430	Oryzias_latipes_hsok
ENSLACG00000011400	GPATCH3	79	74.766	ENSOMEG00000010991	gpatch3	90	74.766	Oryzias_melastigma
ENSLACG00000011400	GPATCH3	72	74.667	ENSOGAG00000011647	GPATCH3	93	74.667	Otolemur_garnettii
ENSLACG00000011400	GPATCH3	78	71.300	ENSOARG00000003955	GPATCH3	88	71.300	Ovis_aries
ENSLACG00000011400	GPATCH3	70	74.771	ENSPPAG00000032902	GPATCH3	90	73.333	Pan_paniscus
ENSLACG00000011400	GPATCH3	71	74.222	ENSPPRG00000024244	GPATCH3	90	74.888	Panthera_pardus
ENSLACG00000011400	GPATCH3	71	74.222	ENSPTIG00000014693	GPATCH3	90	74.222	Panthera_tigris_altaica
ENSLACG00000011400	GPATCH3	70	74.771	ENSPTRG00000023419	GPATCH3	90	73.333	Pan_troglodytes
ENSLACG00000011400	GPATCH3	70	75.229	ENSPANG00000007984	GPATCH3	90	73.778	Papio_anubis
ENSLACG00000011400	GPATCH3	79	73.488	ENSPKIG00000020073	gpatch3	90	73.488	Paramormyrops_kingsleyae
ENSLACG00000011400	GPATCH3	56	78.125	ENSPSIG00000017160	GPATCH3	91	76.957	Pelodiscus_sinensis
ENSLACG00000011400	GPATCH3	74	72.596	ENSPMGG00000001703	gpatch3	91	71.296	Periophthalmus_magnuspinnatus
ENSLACG00000011400	GPATCH3	70	76.256	ENSPEMG00000020632	Gpatch3	90	75.111	Peromyscus_maniculatus_bairdii
ENSLACG00000011400	GPATCH3	73	77.027	ENSPCIG00000012681	GPATCH3	91	76.786	Phascolarctos_cinereus
ENSLACG00000011400	GPATCH3	79	71.028	ENSPFOG00000009928	gpatch3	94	71.028	Poecilia_formosa
ENSLACG00000011400	GPATCH3	79	70.561	ENSPLAG00000023784	gpatch3	92	70.561	Poecilia_latipinna
ENSLACG00000011400	GPATCH3	79	71.028	ENSPMEG00000010268	gpatch3	92	71.028	Poecilia_mexicana
ENSLACG00000011400	GPATCH3	77	70.507	ENSPREG00000008873	gpatch3	93	70.507	Poecilia_reticulata
ENSLACG00000011400	GPATCH3	70	75.814	ENSPPYG00000001675	GPATCH3	90	73.778	Pongo_abelii
ENSLACG00000011400	GPATCH3	70	73.516	ENSPCAG00000008286	GPATCH3	90	73.094	Procavia_capensis
ENSLACG00000011400	GPATCH3	72	72.444	ENSPCOG00000020145	GPATCH3	92	72.444	Propithecus_coquereli
ENSLACG00000011400	GPATCH3	64	73.991	ENSPVAG00000017282	GPATCH3	76	73.991	Pteropus_vampyrus
ENSLACG00000011400	GPATCH3	74	74.146	ENSPNYG00000005172	gpatch3	91	73.364	Pundamilia_nyererei
ENSLACG00000011400	GPATCH3	74	75.962	ENSPNAG00000018501	gpatch3	89	74.766	Pygocentrus_nattereri
ENSLACG00000011400	GPATCH3	70	76.606	ENSRNOG00000007097	Gpatch3	90	75.556	Rattus_norvegicus
ENSLACG00000011400	GPATCH3	80	72.889	ENSRBIG00000005853	GPATCH3	90	72.889	Rhinopithecus_bieti
ENSLACG00000011400	GPATCH3	70	74.312	ENSRROG00000038382	GPATCH3	90	72.889	Rhinopithecus_roxellana
ENSLACG00000011400	GPATCH3	70	74.771	ENSSBOG00000019680	GPATCH3	91	73.991	Saimiri_boliviensis_boliviensis
ENSLACG00000011400	GPATCH3	78	77.232	ENSSHAG00000014268	GPATCH3	89	77.232	Sarcophilus_harrisii
ENSLACG00000011400	GPATCH3	69	73.206	ENSSFOG00015009602	gpatch3	90	72.093	Scleropages_formosus
ENSLACG00000011400	GPATCH3	79	72.430	ENSSMAG00000002067	gpatch3	92	72.430	Scophthalmus_maximus
ENSLACG00000011400	GPATCH3	78	72.115	ENSSDUG00000017071	gpatch3	92	71.028	Seriola_dumerili
ENSLACG00000011400	GPATCH3	78	72.115	ENSSLDG00000016549	gpatch3	92	71.028	Seriola_lalandi_dorsalis
ENSLACG00000011400	GPATCH3	81	75.785	ENSSPUG00000018299	GPATCH3	89	75.785	Sphenodon_punctatus
ENSLACG00000011400	GPATCH3	79	73.832	ENSSPAG00000013046	gpatch3	90	73.832	Stegastes_partitus
ENSLACG00000011400	GPATCH3	79	74.439	ENSSSCG00000003564	GPATCH3	87	74.439	Sus_scrofa
ENSLACG00000011400	GPATCH3	56	78.082	ENSTGUG00000000986	GPATCH3	92	77.232	Taeniopygia_guttata
ENSLACG00000011400	GPATCH3	79	71.028	ENSTRUG00000013294	gpatch3	87	71.028	Takifugu_rubripes
ENSLACG00000011400	GPATCH3	79	71.028	ENSTNIG00000009657	gpatch3	92	71.028	Tetraodon_nigroviridis
ENSLACG00000011400	GPATCH3	62	67.683	ENSTBEG00000002042	GPATCH3	79	67.683	Tupaia_belangeri
ENSLACG00000011400	GPATCH3	68	73.991	ENSTTRG00000016677	GPATCH3	86	73.991	Tursiops_truncatus
ENSLACG00000011400	GPATCH3	70	75.814	ENSUAMG00000026235	GPATCH3	90	73.778	Ursus_americanus
ENSLACG00000011400	GPATCH3	70	76.279	ENSUMAG00000011894	GPATCH3	90	74.222	Ursus_maritimus
ENSLACG00000011400	GPATCH3	71	75.688	ENSVVUG00000012041	GPATCH3	91	74.888	Vulpes_vulpes
ENSLACG00000011400	GPATCH3	79	71.163	ENSXETG00000030345	GPATCH3	95	69.333	Xenopus_tropicalis
ENSLACG00000011400	GPATCH3	79	71.028	ENSXCOG00000016129	gpatch3	96	71.028	Xiphophorus_couchianus
ENSLACG00000011400	GPATCH3	79	71.028	ENSXMAG00000010749	gpatch3	93	71.028	Xiphophorus_maculatus