EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011528 (Gene tree)
Gene ID: 102358978
Gene Symbol: mrpl23
Alias: zgc:86630
Full Name: mitochondrial ribosomal protein L23
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 50635 bases
Position: chrJH127617.1:607783-658417
Accession: 102358978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023169	Ribosomal_L23	PF00276.20	5.4e-15	1	1
ENSLACP00000013087	Ribosomal_L23	PF00276.20	6.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013183	-	492	-	ENSLACP00000013087	163 (aa)	-	H3ATW6
ENSLACT00000026057	-	646	XM_006004501	ENSLACP00000023169	153 (aa)	XP_006004563	M3XKB3

Gene Model

Click here to download ENSLACG00000011528's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011528	mrpl23	100	66.013	ENSG00000214026	MRPL23	100	66.013	Homo_sapiens
ENSLACG00000011528	mrpl23	98	78.667	ENSAPOG00000013198	mrpl23	97	78.667	Acanthochromis_polyacanthus
ENSLACG00000011528	mrpl23	100	65.806	ENSAMEG00000002153	-	100	65.806	Ailuropoda_melanoleuca
ENSLACG00000011528	mrpl23	100	75.163	ENSACIG00000024327	mrpl23	100	75.163	Amphilophus_citrinellus
ENSLACG00000011528	mrpl23	98	79.333	ENSAOCG00000013679	mrpl23	97	79.333	Amphiprion_ocellaris
ENSLACG00000011528	mrpl23	98	79.333	ENSAPEG00000010298	mrpl23	97	79.333	Amphiprion_percula
ENSLACG00000011528	mrpl23	99	75.000	ENSATEG00000019314	mrpl23	99	75.000	Anabas_testudineus
ENSLACG00000011528	mrpl23	69	72.642	ENSAPLG00000012955	-	92	72.642	Anas_platyrhynchos
ENSLACG00000011528	mrpl23	61	66.667	ENSACAG00000009700	-	98	66.667	Anolis_carolinensis
ENSLACG00000011528	mrpl23	96	67.347	ENSANAG00000010507	-	97	67.347	Aotus_nancymaae
ENSLACG00000011528	mrpl23	100	73.856	ENSACLG00000002565	mrpl23	97	75.333	Astatotilapia_calliptera
ENSLACG00000011528	mrpl23	65	78.788	ENSAMXG00000016759	mrpl23	97	56.190	Astyanax_mexicanus
ENSLACG00000011528	mrpl23	71	60.000	ENSBTAG00000000103	MRPL23	100	60.748	Bos_taurus
ENSLACG00000011528	mrpl23	91	33.544	WBGene00020348	mrpl-23	96	33.544	Caenorhabditis_elegans
ENSLACG00000011528	mrpl23	100	66.013	ENSCAFG00000010086	-	100	66.013	Canis_familiaris
ENSLACG00000011528	mrpl23	100	66.013	ENSCAFG00020017439	-	100	66.013	Canis_lupus_dingo
ENSLACG00000011528	mrpl23	100	64.935	ENSCHIG00000019224	-	100	64.935	Capra_hircus
ENSLACG00000011528	mrpl23	99	64.238	ENSTSYG00000030664	-	99	64.238	Carlito_syrichta
ENSLACG00000011528	mrpl23	96	53.741	ENSCAPG00000012400	-	100	53.741	Cavia_aperea
ENSLACG00000011528	mrpl23	100	64.706	ENSCPOG00000035162	-	100	64.706	Cavia_porcellus
ENSLACG00000011528	mrpl23	100	67.974	ENSCCAG00000021662	-	100	67.974	Cebus_capucinus
ENSLACG00000011528	mrpl23	100	67.097	ENSCATG00000037780	-	100	67.097	Cercocebus_atys
ENSLACG00000011528	mrpl23	100	59.477	ENSCATG00000019817	-	95	59.477	Cercocebus_atys
ENSLACG00000011528	mrpl23	100	65.359	ENSCLAG00000015446	-	100	65.359	Chinchilla_lanigera
ENSLACG00000011528	mrpl23	96	66.216	ENSCSAG00000019043	-	96	66.216	Chlorocebus_sabaeus
ENSLACG00000011528	mrpl23	100	67.320	ENSCSAG00000009837	-	100	67.320	Chlorocebus_sabaeus
ENSLACG00000011528	mrpl23	98	75.333	ENSCPBG00000007389	-	99	74.342	Chrysemys_picta_bellii
ENSLACG00000011528	mrpl23	69	37.838	ENSCING00000002791	-	77	34.307	Ciona_intestinalis
ENSLACG00000011528	mrpl23	96	66.667	ENSCANG00000032318	-	100	66.667	Colobus_angolensis_palliatus
ENSLACG00000011528	mrpl23	100	62.092	ENSCGRG00001000462	Mrpl23	100	62.092	Cricetulus_griseus_chok1gshd
ENSLACG00000011528	mrpl23	100	62.092	ENSCGRG00000002207	Mrpl23	100	62.092	Cricetulus_griseus_crigri
ENSLACG00000011528	mrpl23	98	74.000	ENSCSEG00000008738	mrpl23	100	74.324	Cynoglossus_semilaevis
ENSLACG00000011528	mrpl23	98	77.333	ENSCVAG00000002822	mrpl23	97	77.852	Cyprinodon_variegatus
ENSLACG00000011528	mrpl23	100	74.510	ENSDARG00000045696	mrpl23	100	74.510	Danio_rerio
ENSLACG00000011528	mrpl23	99	55.263	ENSDNOG00000047306	-	99	55.263	Dasypus_novemcinctus
ENSLACG00000011528	mrpl23	100	61.290	ENSDORG00000027504	Mrpl23	100	61.290	Dipodomys_ordii
ENSLACG00000011528	mrpl23	96	48.993	FBgn0035335	mRpL23	97	48.993	Drosophila_melanogaster
ENSLACG00000011528	mrpl23	97	66.000	ENSEASG00005000456	-	54	66.443	Equus_asinus_asinus
ENSLACG00000011528	mrpl23	100	66.234	ENSECAG00000024486	-	53	66.234	Equus_caballus
ENSLACG00000011528	mrpl23	100	76.471	ENSELUG00000022256	RM23	100	76.471	Esox_lucius
ENSLACG00000011528	mrpl23	100	64.935	ENSFCAG00000018795	-	100	64.935	Felis_catus
ENSLACG00000011528	mrpl23	95	75.172	ENSFALG00000011598	-	95	75.510	Ficedula_albicollis
ENSLACG00000011528	mrpl23	100	66.013	ENSFDAG00000013606	-	100	66.013	Fukomys_damarensis
ENSLACG00000011528	mrpl23	98	77.333	ENSFHEG00000010978	mrpl23	94	77.181	Fundulus_heteroclitus
ENSLACG00000011528	mrpl23	95	71.724	ENSGMOG00000004509	mrpl23	100	71.724	Gadus_morhua
ENSLACG00000011528	mrpl23	100	71.895	ENSGALG00000006561	-	71	71.895	Gallus_gallus
ENSLACG00000011528	mrpl23	98	76.667	ENSGAFG00000021827	mrpl23	97	76.667	Gambusia_affinis
ENSLACG00000011528	mrpl23	98	75.333	ENSGACG00000011130	mrpl23	97	75.333	Gasterosteus_aculeatus
ENSLACG00000011528	mrpl23	98	75.333	ENSGAGG00000023827	-	99	74.342	Gopherus_agassizii
ENSLACG00000011528	mrpl23	96	66.667	ENSGGOG00000000333	-	83	66.667	Gorilla_gorilla
ENSLACG00000011528	mrpl23	98	75.333	ENSHBUG00000023397	mrpl23	97	75.333	Haplochromis_burtoni
ENSLACG00000011528	mrpl23	100	64.052	ENSHGLG00000016722	-	100	64.052	Heterocephalus_glaber_female
ENSLACG00000011528	mrpl23	100	64.052	ENSHGLG00100003075	-	100	64.052	Heterocephalus_glaber_male
ENSLACG00000011528	mrpl23	98	76.000	ENSHCOG00000009092	mrpl23	97	76.000	Hippocampus_comes
ENSLACG00000011528	mrpl23	100	77.124	ENSIPUG00000005383	mrpl23	100	77.124	Ictalurus_punctatus
ENSLACG00000011528	mrpl23	100	60.784	ENSSTOG00000024573	-	100	60.784	Ictidomys_tridecemlineatus
ENSLACG00000011528	mrpl23	100	61.438	ENSJJAG00000003519	Mrpl23	100	61.438	Jaculus_jaculus
ENSLACG00000011528	mrpl23	99	75.000	ENSKMAG00000001599	mrpl23	99	75.000	Kryptolebias_marmoratus
ENSLACG00000011528	mrpl23	98	75.333	ENSLBEG00000002580	mrpl23	97	75.333	Labrus_bergylta
ENSLACG00000011528	mrpl23	100	81.046	ENSLOCG00000001825	mrpl23	100	81.046	Lepisosteus_oculatus
ENSLACG00000011528	mrpl23	100	67.320	ENSMFAG00000034529	-	100	67.320	Macaca_fascicularis
ENSLACG00000011528	mrpl23	71	60.185	ENSMFAG00000039715	-	100	60.185	Macaca_fascicularis
ENSLACG00000011528	mrpl23	100	66.667	ENSMMUG00000031268	MRPL23	100	66.667	Macaca_mulatta
ENSLACG00000011528	mrpl23	100	66.667	ENSMNEG00000036690	-	100	66.667	Macaca_nemestrina
ENSLACG00000011528	mrpl23	71	61.111	ENSMNEG00000033446	-	100	61.111	Macaca_nemestrina
ENSLACG00000011528	mrpl23	100	65.806	ENSMLEG00000015767	-	100	66.667	Mandrillus_leucophaeus
ENSLACG00000011528	mrpl23	98	76.667	ENSMAMG00000003609	mrpl23	97	76.667	Mastacembelus_armatus
ENSLACG00000011528	mrpl23	98	75.333	ENSMZEG00005017456	mrpl23	97	75.333	Maylandia_zebra
ENSLACG00000011528	mrpl23	99	70.395	ENSMGAG00000007978	-	100	70.395	Meleagris_gallopavo
ENSLACG00000011528	mrpl23	96	61.905	ENSMAUG00000018693	Mrpl23	100	61.905	Mesocricetus_auratus
ENSLACG00000011528	mrpl23	96	69.388	ENSMICG00000042091	-	95	69.595	Microcebus_murinus
ENSLACG00000011528	mrpl23	100	62.745	ENSMOCG00000018436	Mrpl23	100	62.745	Microtus_ochrogaster
ENSLACG00000011528	mrpl23	97	75.839	ENSMMOG00000018097	mrpl23	96	75.839	Mola_mola
ENSLACG00000011528	mrpl23	100	73.203	ENSMODG00000003437	-	100	73.203	Monodelphis_domestica
ENSLACG00000011528	mrpl23	98	74.667	ENSMALG00000014571	mrpl23	100	75.000	Monopterus_albus
ENSLACG00000011528	mrpl23	100	62.179	MGP_CAROLIEiJ_G0030727	Mrpl23	100	62.179	Mus_caroli
ENSLACG00000011528	mrpl23	100	61.538	ENSMUSG00000037772	Mrpl23	100	61.538	Mus_musculus
ENSLACG00000011528	mrpl23	100	62.745	MGP_PahariEiJ_G0013923	Mrpl23	100	62.745	Mus_pahari
ENSLACG00000011528	mrpl23	100	62.179	MGP_SPRETEiJ_G0031836	Mrpl23	100	62.179	Mus_spretus
ENSLACG00000011528	mrpl23	96	66.667	ENSMPUG00000005658	-	97	67.550	Mustela_putorius_furo
ENSLACG00000011528	mrpl23	100	61.039	ENSMPUG00000002923	-	99	61.039	Mustela_putorius_furo
ENSLACG00000011528	mrpl23	100	62.338	ENSNGAG00000023444	-	100	62.338	Nannospalax_galili
ENSLACG00000011528	mrpl23	81	64.800	ENSNGAG00000012877	-	91	64.800	Nannospalax_galili
ENSLACG00000011528	mrpl23	98	76.000	ENSNBRG00000007183	mrpl23	97	76.000	Neolamprologus_brichardi
ENSLACG00000011528	mrpl23	100	66.667	ENSNLEG00000026950	-	100	66.667	Nomascus_leucogenys
ENSLACG00000011528	mrpl23	61	65.591	ENSOPRG00000018353	-	68	65.591	Ochotona_princeps
ENSLACG00000011528	mrpl23	99	62.745	ENSODEG00000017262	-	99	62.745	Octodon_degus
ENSLACG00000011528	mrpl23	99	53.896	ENSODEG00000012131	-	99	53.896	Octodon_degus
ENSLACG00000011528	mrpl23	100	73.856	ENSONIG00000014500	mrpl23	99	74.051	Oreochromis_niloticus
ENSLACG00000011528	mrpl23	97	77.852	ENSORLG00000025383	mrpl23	97	77.852	Oryzias_latipes
ENSLACG00000011528	mrpl23	99	77.483	ENSORLG00020008379	mrpl23	98	77.483	Oryzias_latipes_hni
ENSLACG00000011528	mrpl23	96	77.551	ENSOMEG00000019132	mrpl23	77	77.181	Oryzias_melastigma
ENSLACG00000011528	mrpl23	100	66.013	ENSOGAG00000029988	-	100	66.013	Otolemur_garnettii
ENSLACG00000011528	mrpl23	93	60.784	ENSOARG00000000706	-	95	60.784	Ovis_aries
ENSLACG00000011528	mrpl23	100	66.667	ENSPPAG00000034414	-	100	66.667	Pan_paniscus
ENSLACG00000011528	mrpl23	98	64.238	ENSPPRG00000013232	-	99	64.238	Panthera_pardus
ENSLACG00000011528	mrpl23	100	66.667	ENSPTRG00000033746	MRPL23	100	66.667	Pan_troglodytes
ENSLACG00000011528	mrpl23	100	67.320	ENSPANG00000018813	-	100	67.320	Papio_anubis
ENSLACG00000011528	mrpl23	100	79.085	ENSPKIG00000001102	mrpl23	100	79.085	Paramormyrops_kingsleyae
ENSLACG00000011528	mrpl23	84	73.438	ENSPSIG00000012834	-	100	73.438	Pelodiscus_sinensis
ENSLACG00000011528	mrpl23	93	70.423	ENSPMGG00000006407	mrpl23	96	70.423	Periophthalmus_magnuspinnatus
ENSLACG00000011528	mrpl23	100	59.477	ENSPEMG00000018572	Mrpl23	100	61.438	Peromyscus_maniculatus_bairdii
ENSLACG00000011528	mrpl23	100	66.883	ENSPMAG00000005259	mrpl23	100	66.883	Petromyzon_marinus
ENSLACG00000011528	mrpl23	68	71.154	ENSPCIG00000027047	-	65	71.154	Phascolarctos_cinereus
ENSLACG00000011528	mrpl23	98	76.000	ENSPFOG00000014159	mrpl23	97	76.000	Poecilia_formosa
ENSLACG00000011528	mrpl23	99	75.497	ENSPLAG00000023456	mrpl23	99	75.497	Poecilia_latipinna
ENSLACG00000011528	mrpl23	98	76.667	ENSPMEG00000012252	mrpl23	97	76.667	Poecilia_mexicana
ENSLACG00000011528	mrpl23	98	76.000	ENSPREG00000019951	mrpl23	97	76.000	Poecilia_reticulata
ENSLACG00000011528	mrpl23	100	65.359	ENSPPYG00000002918	-	100	65.359	Pongo_abelii
ENSLACG00000011528	mrpl23	96	69.388	ENSPCOG00000026555	-	100	69.388	Propithecus_coquereli
ENSLACG00000011528	mrpl23	61	68.817	ENSPVAG00000000331	-	61	68.817	Pteropus_vampyrus
ENSLACG00000011528	mrpl23	98	76.000	ENSPNYG00000015541	mrpl23	97	76.000	Pundamilia_nyererei
ENSLACG00000011528	mrpl23	100	77.778	ENSPNAG00000010548	mrpl23	100	77.778	Pygocentrus_nattereri
ENSLACG00000011528	mrpl23	100	63.399	ENSRNOG00000020354	Mrpl23	100	63.399	Rattus_norvegicus
ENSLACG00000011528	mrpl23	100	67.320	ENSRBIG00000041638	-	100	67.320	Rhinopithecus_bieti
ENSLACG00000011528	mrpl23	100	66.452	ENSRROG00000004661	-	100	67.347	Rhinopithecus_roxellana
ENSLACG00000011528	mrpl23	96	67.347	ENSSBOG00000025338	-	82	67.568	Saimiri_boliviensis_boliviensis
ENSLACG00000011528	mrpl23	96	68.707	ENSSHAG00000002716	-	100	68.707	Sarcophilus_harrisii
ENSLACG00000011528	mrpl23	100	79.085	ENSSFOG00015002519	mrpl23	100	79.085	Scleropages_formosus
ENSLACG00000011528	mrpl23	100	71.613	ENSSMAG00000009264	mrpl23	100	71.613	Scophthalmus_maximus
ENSLACG00000011528	mrpl23	98	78.000	ENSSDUG00000019634	mrpl23	100	78.378	Seriola_dumerili
ENSLACG00000011528	mrpl23	98	78.000	ENSSLDG00000012055	mrpl23	97	78.000	Seriola_lalandi_dorsalis
ENSLACG00000011528	mrpl23	100	66.013	ENSSPUG00000002656	-	100	66.013	Sphenodon_punctatus
ENSLACG00000011528	mrpl23	96	79.592	ENSSPAG00000001601	mrpl23	100	79.054	Stegastes_partitus
ENSLACG00000011528	mrpl23	100	63.636	ENSSSCG00000038364	-	100	63.636	Sus_scrofa
ENSLACG00000011528	mrpl23	96	72.789	ENSTGUG00000009338	MRPL23	100	72.789	Taeniopygia_guttata
ENSLACG00000011528	mrpl23	98	78.667	ENSTRUG00000009637	mrpl23	97	78.667	Takifugu_rubripes
ENSLACG00000011528	mrpl23	61	78.495	ENSTNIG00000010463	mrpl23	100	78.495	Tetraodon_nigroviridis
ENSLACG00000011528	mrpl23	61	69.892	ENSTTRG00000009281	-	56	69.892	Tursiops_truncatus
ENSLACG00000011528	mrpl23	100	65.806	ENSUAMG00000020867	-	96	67.114	Ursus_americanus
ENSLACG00000011528	mrpl23	100	65.806	ENSUMAG00000006227	-	85	65.806	Ursus_maritimus
ENSLACG00000011528	mrpl23	100	62.745	ENSVVUG00000002581	-	82	61.250	Vulpes_vulpes
ENSLACG00000011528	mrpl23	100	74.510	ENSXETG00000014017	mrpl23	100	74.510	Xenopus_tropicalis
ENSLACG00000011528	mrpl23	98	65.563	ENSXCOG00000020628	mrpl23	99	65.563	Xiphophorus_couchianus
ENSLACG00000011528	mrpl23	98	75.333	ENSXMAG00000015496	mrpl23	97	75.333	Xiphophorus_maculatus