EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011688 (Gene tree)
Gene ID: 102361447
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 53688 bases
Position: chrJH127255.1:626519-680206
Accession: 102361447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013275	IF-2	PF11987.8	1.5e-19	1	1
ENSLACP00000013275	GTP_EFTU	PF00009.27	7.1e-32	1	1
ENSLACP00000013275	GTP_EFTU_D2	PF03144.25	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013371	-	5458	XM_006001371	ENSLACP00000013275	1210 (aa)	-	H3AUF4

Gene Model

Click here to download ENSLACG00000011688's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011688	eif5b	73	78.101	ENSAPOG00000004375	eif5b	99	68.417	Acanthochromis_polyacanthus
ENSLACG00000011688	eif5b	70	78.103	ENSACIG00000024324	eif5b	61	86.624	Amphilophus_citrinellus
ENSLACG00000011688	eif5b	73	77.840	ENSAOCG00000018386	eif5b	52	86.783	Amphiprion_ocellaris
ENSLACG00000011688	eif5b	52	86.783	ENSATEG00000011259	eif5b	63	86.783	Anabas_testudineus
ENSLACG00000011688	eif5b	50	86.678	ENSATEG00000011451	-	62	86.678	Anabas_testudineus
ENSLACG00000011688	eif5b	73	78.738	ENSATEG00000006765	eif5b	97	67.657	Anabas_testudineus
ENSLACG00000011688	eif5b	100	73.463	ENSACAG00000008305	-	99	71.671	Anolis_carolinensis
ENSLACG00000011688	eif5b	73	77.569	ENSAMXG00000018383	eif5b	52	87.241	Astyanax_mexicanus
ENSLACG00000011688	eif5b	51	56.452	WBGene00021857	iffb-1	58	56.300	Caenorhabditis_elegans
ENSLACG00000011688	eif5b	99	67.731	ENSCAPG00000014619	-	51	83.573	Cavia_aperea
ENSLACG00000011688	eif5b	100	72.159	ENSCPOG00000011967	-	99	71.880	Cavia_porcellus
ENSLACG00000011688	eif5b	56	66.183	ENSCHOG00000002137	-	54	82.488	Choloepus_hoffmanni
ENSLACG00000011688	eif5b	51	64.251	ENSCSAVG00000008808	-	66	64.251	Ciona_savignyi
ENSLACG00000011688	eif5b	52	86.465	ENSCVAG00000019619	eif5b	99	66.987	Cyprinodon_variegatus
ENSLACG00000011688	eif5b	51	69.579	FBgn0026259	eIF5B	54	69.579	Drosophila_melanogaster
ENSLACG00000011688	eif5b	65	66.080	ENSEBUG00000013800	eif5b	62	65.452	Eptatretus_burgeri
ENSLACG00000011688	eif5b	59	92.424	ENSEEUG00000001093	-	57	92.424	Erinaceus_europaeus
ENSLACG00000011688	eif5b	54	83.792	ENSELUG00000001132	eif5b	61	83.767	Esox_lucius
ENSLACG00000011688	eif5b	73	71.702	ENSGMOG00000002031	eif5b	68	83.917	Gadus_morhua
ENSLACG00000011688	eif5b	73	76.228	ENSGACG00000010536	eif5b	86	85.032	Gasterosteus_aculeatus
ENSLACG00000011688	eif5b	55	87.218	ENSGAGG00000022242	-	92	89.474	Gopherus_agassizii
ENSLACG00000011688	eif5b	73	78.111	ENSHBUG00000023319	eif5b	93	87.580	Haplochromis_burtoni
ENSLACG00000011688	eif5b	73	78.333	ENSIPUG00000020910	eif5b	53	87.879	Ictalurus_punctatus
ENSLACG00000011688	eif5b	73	77.679	ENSKMAG00000004325	eif5b	99	66.908	Kryptolebias_marmoratus
ENSLACG00000011688	eif5b	73	77.962	ENSMAMG00000022568	eif5b	51	86.465	Mastacembelus_armatus
ENSLACG00000011688	eif5b	73	78.111	ENSMZEG00005012696	eif5b	93	87.580	Maylandia_zebra
ENSLACG00000011688	eif5b	100	70.097	ENSMODG00000001387	-	73	78.668	Monodelphis_domestica
ENSLACG00000011688	eif5b	83	74.336	ENSMALG00000005862	eif5b	99	66.242	Monopterus_albus
ENSLACG00000011688	eif5b	73	74.362	ENSNBRG00000021912	eif5b	58	86.465	Neolamprologus_brichardi
ENSLACG00000011688	eif5b	81	89.510	ENSMEUG00000007080	-	79	89.510	Notamacropus_eugenii
ENSLACG00000011688	eif5b	73	77.248	ENSONIG00000018749	eif5b	52	86.943	Oreochromis_niloticus
ENSLACG00000011688	eif5b	100	69.870	ENSOANG00000004621	-	74	79.125	Ornithorhynchus_anatinus
ENSLACG00000011688	eif5b	100	71.636	ENSOCUG00000021154	-	100	72.392	Oryctolagus_cuniculus
ENSLACG00000011688	eif5b	83	74.975	ENSORLG00000001525	eif5b	53	86.943	Oryzias_latipes
ENSLACG00000011688	eif5b	73	77.815	ENSORLG00020005327	eif5b	53	86.783	Oryzias_latipes_hni
ENSLACG00000011688	eif5b	73	77.629	ENSORLG00015008949	eif5b	53	86.624	Oryzias_latipes_hsok
ENSLACG00000011688	eif5b	66	76.866	ENSOMEG00000016539	eif5b	99	76.617	Oryzias_melastigma
ENSLACG00000011688	eif5b	100	67.068	ENSPKIG00000011133	eif5b	51	86.624	Paramormyrops_kingsleyae
ENSLACG00000011688	eif5b	57	79.050	ENSPSIG00000014914	-	93	75.795	Pelodiscus_sinensis
ENSLACG00000011688	eif5b	79	62.680	ENSPMAG00000004508	eif5b	52	74.482	Petromyzon_marinus
ENSLACG00000011688	eif5b	59	81.155	ENSPFOG00000007543	eif5b	90	85.864	Poecilia_formosa
ENSLACG00000011688	eif5b	73	78.285	ENSPLAG00000015913	eif5b	99	66.478	Poecilia_latipinna
ENSLACG00000011688	eif5b	73	79.018	ENSPMEG00000006712	eif5b	52	86.146	Poecilia_mexicana
ENSLACG00000011688	eif5b	65	73.908	ENSPCAG00000007829	-	57	82.775	Procavia_capensis
ENSLACG00000011688	eif5b	99	71.080	ENSPCOG00000019508	-	99	88.710	Propithecus_coquereli
ENSLACG00000011688	eif5b	82	89.524	ENSPVAG00000006592	-	81	85.106	Pteropus_vampyrus
ENSLACG00000011688	eif5b	73	75.444	ENSPNYG00000021051	eif5b	64	87.420	Pundamilia_nyererei
ENSLACG00000011688	eif5b	73	78.160	ENSPNAG00000023852	eif5b	51	87.879	Pygocentrus_nattereri
ENSLACG00000011688	eif5b	50	50.409	YAL035W	FUN12	60	50.245	Saccharomyces_cerevisiae
ENSLACG00000011688	eif5b	77	74.739	ENSSFOG00015000594	eif5b	92	85.987	Scleropages_formosus
ENSLACG00000011688	eif5b	78	85.510	ENSSMAG00000000045	eif5b	61	85.510	Scophthalmus_maximus
ENSLACG00000011688	eif5b	70	79.250	ENSSDUG00000005847	eif5b	62	86.783	Seriola_dumerili
ENSLACG00000011688	eif5b	70	79.015	ENSSLDG00000013738	eif5b	62	87.102	Seriola_lalandi_dorsalis
ENSLACG00000011688	eif5b	68	72.672	ENSSPAG00000005335	eif5b	61	81.210	Stegastes_partitus
ENSLACG00000011688	eif5b	68	73.945	ENSTRUG00000007772	eif5b	62	84.554	Takifugu_rubripes
ENSLACG00000011688	eif5b	75	72.717	ENSTNIG00000006580	eif5b	95	74.832	Tetraodon_nigroviridis
ENSLACG00000011688	eif5b	75	91.703	ENSTBEG00000009133	-	79	91.703	Tupaia_belangeri
ENSLACG00000011688	eif5b	100	64.529	ENSXETG00000019377	eif5b	53	87.400	Xenopus_tropicalis
ENSLACG00000011688	eif5b	73	74.944	ENSXCOG00000016681	eif5b	70	84.945	Xiphophorus_couchianus
ENSLACG00000011688	eif5b	73	75.112	ENSXMAG00000001002	eif5b	70	85.215	Xiphophorus_maculatus