EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011777 (Gene tree)
Gene ID: 102367695
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 42391 bases
Position: chrJH127332.1:635441-677831
Accession: 102367695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013377	MA3	PF02847.17	1.6e-20	1	1
ENSLACP00000013377	MIF4G	PF02854.19	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013473	NOM1-201	3473	XM_006002171	ENSLACP00000013377	826 (aa)	XP_006002233	H3AUQ6

Gene Model

Click here to download ENSLACG00000011777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011777	NOM1	98	57.455	ENSG00000146909	NOM1	80	64.132	Homo_sapiens
ENSLACG00000011777	NOM1	64	69.231	ENSAPOG00000012073	nom1	84	61.453	Acanthochromis_polyacanthus
ENSLACG00000011777	NOM1	82	59.190	ENSAMEG00000001412	NOM1	96	58.000	Ailuropoda_melanoleuca
ENSLACG00000011777	NOM1	97	56.951	ENSACIG00000018050	nom1	70	69.384	Amphilophus_citrinellus
ENSLACG00000011777	NOM1	64	68.480	ENSAOCG00000006229	nom1	84	61.657	Amphiprion_ocellaris
ENSLACG00000011777	NOM1	64	68.293	ENSAPEG00000015994	nom1	84	61.010	Amphiprion_percula
ENSLACG00000011777	NOM1	87	62.309	ENSATEG00000005405	nom1	83	62.464	Anabas_testudineus
ENSLACG00000011777	NOM1	79	62.801	ENSAPLG00000006585	NOM1	98	63.855	Anas_platyrhynchos
ENSLACG00000011777	NOM1	80	61.426	ENSACAG00000011192	NOM1	85	58.967	Anolis_carolinensis
ENSLACG00000011777	NOM1	95	58.312	ENSACLG00000000033	nom1	88	59.463	Astatotilapia_calliptera
ENSLACG00000011777	NOM1	64	68.105	ENSAMXG00000041486	nom1	83	60.888	Astyanax_mexicanus
ENSLACG00000011777	NOM1	98	52.708	ENSBTAG00000016435	NOM1	80	56.802	Bos_taurus
ENSLACG00000011777	NOM1	98	57.264	ENSCJAG00000004336	NOM1	80	63.309	Callithrix_jacchus
ENSLACG00000011777	NOM1	98	51.874	ENSCAFG00020005121	NOM1	80	60.515	Canis_lupus_dingo
ENSLACG00000011777	NOM1	82	58.934	ENSCHIG00000020102	NOM1	96	51.429	Capra_hircus
ENSLACG00000011777	NOM1	97	56.851	ENSTSYG00000000227	NOM1	96	55.078	Carlito_syrichta
ENSLACG00000011777	NOM1	63	69.423	ENSCAPG00000016273	NOM1	99	69.423	Cavia_aperea
ENSLACG00000011777	NOM1	98	52.398	ENSCPOG00000025538	NOM1	79	57.204	Cavia_porcellus
ENSLACG00000011777	NOM1	89	71.021	ENSCCAG00000014944	NOM1	99	71.955	Cebus_capucinus
ENSLACG00000011777	NOM1	82	59.254	ENSCLAG00000000267	NOM1	80	60.663	Chinchilla_lanigera
ENSLACG00000011777	NOM1	64	75.810	ENSCPBG00000018215	NOM1	60	75.810	Chrysemys_picta_bellii
ENSLACG00000011777	NOM1	63	39.619	ENSCING00000005248	-	91	36.146	Ciona_intestinalis
ENSLACG00000011777	NOM1	63	70.633	ENSCANG00000041984	NOM1	89	70.633	Colobus_angolensis_palliatus
ENSLACG00000011777	NOM1	82	60.232	ENSCGRG00001020293	Nom1	86	56.522	Cricetulus_griseus_chok1gshd
ENSLACG00000011777	NOM1	63	69.942	ENSCGRG00000005405	Nom1	97	69.942	Cricetulus_griseus_crigri
ENSLACG00000011777	NOM1	85	58.924	ENSCSEG00000000932	nom1	81	59.007	Cynoglossus_semilaevis
ENSLACG00000011777	NOM1	95	57.072	ENSCVAG00000007562	nom1	83	61.946	Cyprinodon_variegatus
ENSLACG00000011777	NOM1	64	67.608	ENSDARG00000060027	nom1	100	68.583	Danio_rerio
ENSLACG00000011777	NOM1	65	57.196	ENSDORG00000015682	Nom1	99	50.860	Dipodomys_ordii
ENSLACG00000011777	NOM1	60	39.530	FBgn0035336	CG9004	77	37.104	Drosophila_melanogaster
ENSLACG00000011777	NOM1	74	57.647	ENSETEG00000003104	NOM1	72	57.647	Echinops_telfairi
ENSLACG00000011777	NOM1	52	51.376	ENSEBUG00000010077	nom1	96	51.376	Eptatretus_burgeri
ENSLACG00000011777	NOM1	82	60.926	ENSEASG00005001489	NOM1	80	62.020	Equus_asinus_asinus
ENSLACG00000011777	NOM1	71	65.017	ENSECAG00000007596	NOM1	75	60.888	Equus_caballus
ENSLACG00000011777	NOM1	64	69.565	ENSELUG00000006266	nom1	83	63.300	Esox_lucius
ENSLACG00000011777	NOM1	98	52.734	ENSFCAG00000006467	NOM1	84	59.366	Felis_catus
ENSLACG00000011777	NOM1	84	61.723	ENSFALG00000006904	NOM1	99	62.321	Ficedula_albicollis
ENSLACG00000011777	NOM1	99	52.774	ENSFDAG00000016241	NOM1	82	60.000	Fukomys_damarensis
ENSLACG00000011777	NOM1	95	57.447	ENSFHEG00000015974	nom1	86	60.749	Fundulus_heteroclitus
ENSLACG00000011777	NOM1	86	58.264	ENSGMOG00000005129	nom1	91	59.161	Gadus_morhua
ENSLACG00000011777	NOM1	81	62.407	ENSGALG00000006437	NOM1	78	61.782	Gallus_gallus
ENSLACG00000011777	NOM1	98	56.250	ENSGAFG00000003211	nom1	83	61.254	Gambusia_affinis
ENSLACG00000011777	NOM1	83	63.453	ENSGAGG00000014347	NOM1	64	74.286	Gopherus_agassizii
ENSLACG00000011777	NOM1	66	70.182	ENSGGOG00000010920	NOM1	74	63.083	Gorilla_gorilla
ENSLACG00000011777	NOM1	95	57.231	ENSHBUG00000014616	nom1	83	61.354	Haplochromis_burtoni
ENSLACG00000011777	NOM1	98	54.343	ENSHGLG00000007392	NOM1	80	59.312	Heterocephalus_glaber_female
ENSLACG00000011777	NOM1	85	69.649	ENSHGLG00100014407	NOM1	77	70.096	Heterocephalus_glaber_male
ENSLACG00000011777	NOM1	65	66.543	ENSIPUG00000013980	nom1	83	60.907	Ictalurus_punctatus
ENSLACG00000011777	NOM1	63	70.633	ENSSTOG00000031736	NOM1	91	70.633	Ictidomys_tridecemlineatus
ENSLACG00000011777	NOM1	59	69.753	ENSJJAG00000011716	Nom1	98	69.753	Jaculus_jaculus
ENSLACG00000011777	NOM1	64	69.663	ENSLBEG00000009252	nom1	84	61.103	Labrus_bergylta
ENSLACG00000011777	NOM1	98	59.736	ENSLOCG00000012452	nom1	85	64.930	Lepisosteus_oculatus
ENSLACG00000011777	NOM1	98	49.337	ENSLAFG00000007119	NOM1	81	55.556	Loxodonta_africana
ENSLACG00000011777	NOM1	98	53.118	ENSMMUG00000039033	NOM1	80	58.523	Macaca_mulatta
ENSLACG00000011777	NOM1	63	70.825	ENSMLEG00000037062	NOM1	98	70.825	Mandrillus_leucophaeus
ENSLACG00000011777	NOM1	99	56.228	ENSMAMG00000004118	nom1	89	58.508	Mastacembelus_armatus
ENSLACG00000011777	NOM1	95	58.186	ENSMZEG00005000384	nom1	88	59.329	Maylandia_zebra
ENSLACG00000011777	NOM1	83	61.836	ENSMGAG00000005051	NOM1	99	61.693	Meleagris_gallopavo
ENSLACG00000011777	NOM1	97	54.490	ENSMAUG00000017988	Nom1	97	55.072	Mesocricetus_auratus
ENSLACG00000011777	NOM1	97	53.083	ENSMICG00000017531	NOM1	81	59.629	Microcebus_murinus
ENSLACG00000011777	NOM1	98	55.833	ENSMOCG00000015962	Nom1	85	58.933	Microtus_ochrogaster
ENSLACG00000011777	NOM1	98	53.919	ENSMMOG00000004419	nom1	82	58.567	Mola_mola
ENSLACG00000011777	NOM1	63	73.896	ENSMODG00000005177	NOM1	81	63.075	Monodelphis_domestica
ENSLACG00000011777	NOM1	92	57.197	ENSMALG00000008800	nom1	82	61.339	Monopterus_albus
ENSLACG00000011777	NOM1	98	54.028	MGP_CAROLIEiJ_G0027043	Nom1	95	53.708	Mus_caroli
ENSLACG00000011777	NOM1	98	55.060	ENSMUSG00000001569	Nom1	84	57.239	Mus_musculus
ENSLACG00000011777	NOM1	98	54.191	MGP_SPRETEiJ_G0028039	Nom1	84	57.507	Mus_spretus
ENSLACG00000011777	NOM1	82	57.558	ENSMPUG00000009745	NOM1	99	57.803	Mustela_putorius_furo
ENSLACG00000011777	NOM1	76	61.722	ENSMLUG00000009129	NOM1	91	65.832	Myotis_lucifugus
ENSLACG00000011777	NOM1	95	58.772	ENSNBRG00000016429	nom1	95	69.492	Neolamprologus_brichardi
ENSLACG00000011777	NOM1	98	53.023	ENSNLEG00000000238	NOM1	80	62.000	Nomascus_leucogenys
ENSLACG00000011777	NOM1	51	78.776	ENSMEUG00000001108	NOM1	86	62.570	Notamacropus_eugenii
ENSLACG00000011777	NOM1	51	61.538	ENSOPRG00000014676	NOM1	69	49.476	Ochotona_princeps
ENSLACG00000011777	NOM1	82	59.110	ENSODEG00000009399	NOM1	98	59.137	Octodon_degus
ENSLACG00000011777	NOM1	87	61.080	ENSONIG00000005958	nom1	95	59.186	Oreochromis_niloticus
ENSLACG00000011777	NOM1	56	71.645	ENSOANG00000006139	-	97	71.645	Ornithorhynchus_anatinus
ENSLACG00000011777	NOM1	98	56.574	ENSOCUG00000004071	-	96	55.985	Oryctolagus_cuniculus
ENSLACG00000011777	NOM1	94	46.827	ENSOCUG00000021448	-	85	55.835	Oryctolagus_cuniculus
ENSLACG00000011777	NOM1	98	56.242	ENSORLG00000010541	nom1	91	58.571	Oryzias_latipes
ENSLACG00000011777	NOM1	84	61.648	ENSORLG00020010789	nom1	91	61.818	Oryzias_latipes_hni
ENSLACG00000011777	NOM1	98	57.143	ENSORLG00015010475	nom1	91	60.504	Oryzias_latipes_hsok
ENSLACG00000011777	NOM1	64	68.927	ENSOMEG00000004219	nom1	84	62.801	Oryzias_melastigma
ENSLACG00000011777	NOM1	71	64.765	ENSOGAG00000001124	NOM1	86	70.825	Otolemur_garnettii
ENSLACG00000011777	NOM1	82	58.646	ENSOARG00000007261	NOM1	93	57.183	Ovis_aries
ENSLACG00000011777	NOM1	82	63.059	ENSPPAG00000041374	NOM1	80	63.271	Pan_paniscus
ENSLACG00000011777	NOM1	82	58.357	ENSPTIG00000013532	NOM1	94	59.195	Panthera_tigris_altaica
ENSLACG00000011777	NOM1	82	62.771	ENSPTRG00000019917	NOM1	80	62.984	Pan_troglodytes
ENSLACG00000011777	NOM1	98	54.751	ENSPANG00000007605	NOM1	80	62.270	Papio_anubis
ENSLACG00000011777	NOM1	100	55.463	ENSPKIG00000005825	nom1	99	55.372	Paramormyrops_kingsleyae
ENSLACG00000011777	NOM1	64	74.857	ENSPSIG00000017848	NOM1	87	74.857	Pelodiscus_sinensis
ENSLACG00000011777	NOM1	98	56.760	ENSPMGG00000002577	nom1	83	61.671	Periophthalmus_magnuspinnatus
ENSLACG00000011777	NOM1	97	55.542	ENSPEMG00000024180	Nom1	79	62.064	Peromyscus_maniculatus_bairdii
ENSLACG00000011777	NOM1	99	54.713	ENSPCIG00000027941	NOM1	78	63.394	Phascolarctos_cinereus
ENSLACG00000011777	NOM1	98	56.205	ENSPFOG00000015771	nom1	83	61.418	Poecilia_formosa
ENSLACG00000011777	NOM1	64	68.480	ENSPLAG00000007856	nom1	83	61.439	Poecilia_latipinna
ENSLACG00000011777	NOM1	98	55.660	ENSPMEG00000014155	nom1	83	61.277	Poecilia_mexicana
ENSLACG00000011777	NOM1	98	56.348	ENSPREG00000008850	nom1	83	61.461	Poecilia_reticulata
ENSLACG00000011777	NOM1	98	50.758	ENSPPYG00000018222	NOM1	79	58.890	Pongo_abelii
ENSLACG00000011777	NOM1	75	63.615	ENSPCAG00000000440	NOM1	63	63.615	Procavia_capensis
ENSLACG00000011777	NOM1	63	70.058	ENSPCOG00000015222	NOM1	98	70.058	Propithecus_coquereli
ENSLACG00000011777	NOM1	82	58.088	ENSPVAG00000014760	NOM1	80	58.046	Pteropus_vampyrus
ENSLACG00000011777	NOM1	95	58.291	ENSPNYG00000006975	nom1	95	69.418	Pundamilia_nyererei
ENSLACG00000011777	NOM1	67	64.452	ENSPNAG00000011085	nom1	80	56.292	Pygocentrus_nattereri
ENSLACG00000011777	NOM1	97	51.773	ENSRNOG00000048969	AABR07059041.1	99	52.906	Rattus_norvegicus
ENSLACG00000011777	NOM1	98	55.355	ENSRBIG00000037042	NOM1	80	61.538	Rhinopithecus_bieti
ENSLACG00000011777	NOM1	98	55.114	ENSRROG00000037293	NOM1	80	61.254	Rhinopithecus_roxellana
ENSLACG00000011777	NOM1	50	64.806	ENSSHAG00000002835	-	99	65.854	Sarcophilus_harrisii
ENSLACG00000011777	NOM1	63	73.512	ENSSHAG00000017998	-	99	61.836	Sarcophilus_harrisii
ENSLACG00000011777	NOM1	59	69.547	ENSSFOG00015003196	nom1	100	69.547	Scleropages_formosus
ENSLACG00000011777	NOM1	98	55.991	ENSSMAG00000011047	nom1	85	61.264	Scophthalmus_maximus
ENSLACG00000011777	NOM1	64	70.998	ENSSDUG00000006834	nom1	83	63.016	Seriola_dumerili
ENSLACG00000011777	NOM1	64	70.544	ENSSLDG00000021812	nom1	83	63.053	Seriola_lalandi_dorsalis
ENSLACG00000011777	NOM1	86	54.184	ENSSPUG00000002556	NOM1	90	74.448	Sphenodon_punctatus
ENSLACG00000011777	NOM1	64	69.868	ENSSPAG00000000953	nom1	84	61.773	Stegastes_partitus
ENSLACG00000011777	NOM1	85	61.236	ENSTGUG00000000702	-	99	61.461	Taeniopygia_guttata
ENSLACG00000011777	NOM1	84	61.871	ENSTRUG00000010239	nom1	83	61.980	Takifugu_rubripes
ENSLACG00000011777	NOM1	98	54.106	ENSTNIG00000012783	nom1	95	54.987	Tetraodon_nigroviridis
ENSLACG00000011777	NOM1	82	59.590	ENSTTRG00000009691	NOM1	81	59.538	Tursiops_truncatus
ENSLACG00000011777	NOM1	82	59.827	ENSUAMG00000025450	NOM1	80	59.571	Ursus_americanus
ENSLACG00000011777	NOM1	85	58.136	ENSUMAG00000014275	NOM1	96	59.885	Ursus_maritimus
ENSLACG00000011777	NOM1	82	59.827	ENSVVUG00000002608	NOM1	80	60.888	Vulpes_vulpes
ENSLACG00000011777	NOM1	100	56.308	ENSXETG00000021611	nom1	82	74.634	Xenopus_tropicalis
ENSLACG00000011777	NOM1	98	56.659	ENSXMAG00000002451	nom1	82	62.678	Xiphophorus_maculatus