EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011845 (Gene tree)
Gene ID: 102348668
Gene Symbol: RBM25
Alias: NET52|RNPC7|S164|Snu71|fSAP94
Full Name: RNA binding motif protein 25
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 62400 bases
Position: chrJH127177.1:641671-704070
Accession: 102348668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013456	RRM_1	PF00076.22	6.9e-08	1	1
ENSLACP00000013457	RRM_1	PF00076.22	7.3e-08	1	1
ENSLACP00000013456	PWI	PF01480.17	1.8e-14	1	1
ENSLACP00000013457	PWI	PF01480.17	1.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013552	RBM25-201	4253	XM_006000499	ENSLACP00000013456	810 (aa)	XP_006000561	H3AUY5
ENSLACT00000013553	RBM25-202	2520	-	ENSLACP00000013457	839 (aa)	-	H3AUY6

Gene Model

Click here to download ENSLACG00000011845's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011845	RBM25	50	91.133	ENSG00000119707	RBM25	100	86.719	Homo_sapiens
ENSLACG00000011845	RBM25	55	75.870	ENSAPOG00000017757	rbm25a	62	72.917	Acanthochromis_polyacanthus
ENSLACG00000011845	RBM25	50	90.887	ENSAMEG00000016270	RBM25	100	82.840	Ailuropoda_melanoleuca
ENSLACG00000011845	RBM25	54	66.322	ENSACIG00000014178	rbm25b	57	65.031	Amphilophus_citrinellus
ENSLACG00000011845	RBM25	51	75.000	ENSACIG00000019482	rbm25a	53	66.594	Amphilophus_citrinellus
ENSLACG00000011845	RBM25	51	79.391	ENSAOCG00000013695	rbm25a	56	76.106	Amphiprion_ocellaris
ENSLACG00000011845	RBM25	51	79.391	ENSAPEG00000007514	rbm25a	57	76.106	Amphiprion_percula
ENSLACG00000011845	RBM25	55	79.111	ENSATEG00000017312	rbm25b	62	73.486	Anabas_testudineus
ENSLACG00000011845	RBM25	53	74.298	ENSATEG00000020676	rbm25a	63	73.743	Anabas_testudineus
ENSLACG00000011845	RBM25	50	90.370	ENSAPLG00000006643	RBM25	100	82.161	Anas_platyrhynchos
ENSLACG00000011845	RBM25	50	89.655	ENSACAG00000016239	RBM25	100	80.453	Anolis_carolinensis
ENSLACG00000011845	RBM25	50	91.133	ENSANAG00000028295	RBM25	100	82.959	Aotus_nancymaae
ENSLACG00000011845	RBM25	98	69.363	ENSACLG00000027482	rbm25a	76	78.986	Astatotilapia_calliptera
ENSLACG00000011845	RBM25	98	75.633	ENSAMXG00000024525	rbm25b	100	75.030	Astyanax_mexicanus
ENSLACG00000011845	RBM25	50	90.887	ENSBTAG00000017177	RBM25	100	82.840	Bos_taurus
ENSLACG00000011845	RBM25	62	48.182	WBGene00012245	W04D2.6	57	33.411	Caenorhabditis_elegans
ENSLACG00000011845	RBM25	50	90.887	ENSCJAG00000014441	-	100	82.840	Callithrix_jacchus
ENSLACG00000011845	RBM25	50	90.887	ENSTSYG00000003024	RBM25	100	82.840	Carlito_syrichta
ENSLACG00000011845	RBM25	50	90.887	ENSCPOG00000002479	RBM25	100	82.840	Cavia_porcellus
ENSLACG00000011845	RBM25	50	90.887	ENSCATG00000039651	RBM25	100	82.840	Cercocebus_atys
ENSLACG00000011845	RBM25	50	90.887	ENSCLAG00000003977	RBM25	100	82.840	Chinchilla_lanigera
ENSLACG00000011845	RBM25	50	90.887	ENSCSAG00000012801	RBM25	100	82.840	Chlorocebus_sabaeus
ENSLACG00000011845	RBM25	64	92.941	ENSCHOG00000008903	RBM25	63	92.941	Choloepus_hoffmanni
ENSLACG00000011845	RBM25	50	84.729	ENSCPBG00000011025	RBM25	57	78.132	Chrysemys_picta_bellii
ENSLACG00000011845	RBM25	50	84.483	ENSCANG00000043874	RBM25	98	81.315	Colobus_angolensis_palliatus
ENSLACG00000011845	RBM25	50	91.133	ENSCGRG00000017595	Rbm25	100	83.234	Cricetulus_griseus_crigri
ENSLACG00000011845	RBM25	52	71.522	ENSCSEG00000009430	rbm25a	55	71.202	Cynoglossus_semilaevis
ENSLACG00000011845	RBM25	56	67.901	ENSCVAG00000003478	rbm25b	58	69.247	Cyprinodon_variegatus
ENSLACG00000011845	RBM25	68	77.011	ENSCVAG00000005498	rbm25a	99	77.534	Cyprinodon_variegatus
ENSLACG00000011845	RBM25	50	90.640	ENSDNOG00000004959	RBM25	100	82.722	Dasypus_novemcinctus
ENSLACG00000011845	RBM25	50	90.640	ENSDORG00000013247	Rbm25	57	84.076	Dipodomys_ordii
ENSLACG00000011845	RBM25	85	74.775	FBgn0028474	CG4119	53	74.775	Drosophila_melanogaster
ENSLACG00000011845	RBM25	50	89.901	ENSETEG00000015941	RBM25	100	77.699	Echinops_telfairi
ENSLACG00000011845	RBM25	83	92.000	ENSEEUG00000007350	RBM25	81	92.000	Erinaceus_europaeus
ENSLACG00000011845	RBM25	54	70.348	ENSELUG00000007730	rbm25b	52	79.200	Esox_lucius
ENSLACG00000011845	RBM25	50	90.887	ENSFCAG00000011716	RBM25	100	82.840	Felis_catus
ENSLACG00000011845	RBM25	50	90.394	ENSFALG00000005445	RBM25	100	81.570	Ficedula_albicollis
ENSLACG00000011845	RBM25	50	90.887	ENSFDAG00000006542	RBM25	100	82.840	Fukomys_damarensis
ENSLACG00000011845	RBM25	53	72.540	ENSFHEG00000005318	rbm25a	50	71.394	Fundulus_heteroclitus
ENSLACG00000011845	RBM25	54	71.849	ENSFHEG00000003513	rbm25b	59	68.454	Fundulus_heteroclitus
ENSLACG00000011845	RBM25	77	74.265	ENSGMOG00000014070	rbm25a	85	74.224	Gadus_morhua
ENSLACG00000011845	RBM25	86	71.825	ENSGMOG00000014097	rbm25b	89	71.713	Gadus_morhua
ENSLACG00000011845	RBM25	98	75.802	ENSGAFG00000018036	rbm25a	57	75.604	Gambusia_affinis
ENSLACG00000011845	RBM25	98	69.544	ENSGAFG00000001092	rbm25b	55	70.575	Gambusia_affinis
ENSLACG00000011845	RBM25	50	85.714	ENSGAGG00000024524	RBM25	100	80.373	Gopherus_agassizii
ENSLACG00000011845	RBM25	50	91.133	ENSGGOG00000002415	RBM25	100	82.959	Gorilla_gorilla
ENSLACG00000011845	RBM25	55	76.739	ENSHBUG00000016908	rbm25a	50	78.986	Haplochromis_burtoni
ENSLACG00000011845	RBM25	50	90.887	ENSHGLG00000014745	RBM25	100	82.840	Heterocephalus_glaber_female
ENSLACG00000011845	RBM25	50	91.111	ENSHGLG00100018236	-	95	87.097	Heterocephalus_glaber_male
ENSLACG00000011845	RBM25	98	70.370	ENSHCOG00000000142	rbm25b	60	72.632	Hippocampus_comes
ENSLACG00000011845	RBM25	55	73.465	ENSIPUG00000021051	rbm25b	61	72.671	Ictalurus_punctatus
ENSLACG00000011845	RBM25	50	90.887	ENSSTOG00000011117	RBM25	100	82.840	Ictidomys_tridecemlineatus
ENSLACG00000011845	RBM25	52	74.783	ENSKMAG00000018826	rbm25b	58	73.542	Kryptolebias_marmoratus
ENSLACG00000011845	RBM25	57	71.816	ENSKMAG00000016242	rbm25a	54	76.570	Kryptolebias_marmoratus
ENSLACG00000011845	RBM25	54	84.564	ENSLOCG00000014196	rbm25b	100	83.354	Lepisosteus_oculatus
ENSLACG00000011845	RBM25	50	90.887	ENSMFAG00000040040	RBM25	100	82.840	Macaca_fascicularis
ENSLACG00000011845	RBM25	50	90.887	ENSMMUG00000002332	RBM25	100	89.241	Macaca_mulatta
ENSLACG00000011845	RBM25	50	90.887	ENSMNEG00000032922	RBM25	100	77.751	Macaca_nemestrina
ENSLACG00000011845	RBM25	50	90.887	ENSMLEG00000035157	RBM25	100	82.840	Mandrillus_leucophaeus
ENSLACG00000011845	RBM25	82	77.284	ENSMAMG00000000165	rbm25a	51	77.330	Mastacembelus_armatus
ENSLACG00000011845	RBM25	56	72.113	ENSMAMG00000004524	rbm25b	57	73.230	Mastacembelus_armatus
ENSLACG00000011845	RBM25	55	76.739	ENSMZEG00005011183	rbm25a	54	78.986	Maylandia_zebra
ENSLACG00000011845	RBM25	50	90.370	ENSMGAG00000011707	RBM25	100	78.087	Meleagris_gallopavo
ENSLACG00000011845	RBM25	50	90.640	ENSMICG00000034082	RBM25	100	82.722	Microcebus_murinus
ENSLACG00000011845	RBM25	50	91.133	ENSMOCG00000001935	Rbm25	100	80.308	Microtus_ochrogaster
ENSLACG00000011845	RBM25	98	74.672	ENSMMOG00000015545	rbm25b	93	75.455	Mola_mola
ENSLACG00000011845	RBM25	53	78.261	ENSMMOG00000009065	rbm25a	53	78.365	Mola_mola
ENSLACG00000011845	RBM25	50	91.872	ENSMODG00000006820	RBM25	99	81.398	Monodelphis_domestica
ENSLACG00000011845	RBM25	50	91.133	MGP_CAROLIEiJ_G0017921	Rbm25	95	87.097	Mus_caroli
ENSLACG00000011845	RBM25	50	91.133	ENSMUSG00000010608	Rbm25	95	87.097	Mus_musculus
ENSLACG00000011845	RBM25	50	91.133	MGP_PahariEiJ_G0029677	Rbm25	95	87.097	Mus_pahari
ENSLACG00000011845	RBM25	50	91.133	MGP_SPRETEiJ_G0018766	-	95	87.097	Mus_spretus
ENSLACG00000011845	RBM25	50	90.887	ENSMPUG00000003698	RBM25	99	82.138	Mustela_putorius_furo
ENSLACG00000011845	RBM25	50	85.891	ENSMLUG00000024167	-	56	76.119	Myotis_lucifugus
ENSLACG00000011845	RBM25	52	85.849	ENSMLUG00000015434	-	100	80.496	Myotis_lucifugus
ENSLACG00000011845	RBM25	50	90.887	ENSNGAG00000018465	Rbm25	100	80.427	Nannospalax_galili
ENSLACG00000011845	RBM25	50	91.133	ENSNLEG00000002701	RBM25	100	82.959	Nomascus_leucogenys
ENSLACG00000011845	RBM25	50	91.872	ENSOANG00000001056	RBM25	99	79.294	Ornithorhynchus_anatinus
ENSLACG00000011845	RBM25	100	75.265	ENSOCUG00000013737	RBM25	100	82.840	Oryctolagus_cuniculus
ENSLACG00000011845	RBM25	54	71.639	ENSORLG00000011874	rbm25b	60	67.594	Oryzias_latipes
ENSLACG00000011845	RBM25	52	77.494	ENSORLG00020016422	rbm25b	57	72.000	Oryzias_latipes_hni
ENSLACG00000011845	RBM25	54	71.639	ENSORLG00015011269	rbm25b	60	67.594	Oryzias_latipes_hsok
ENSLACG00000011845	RBM25	54	71.610	ENSOMEG00000023172	rbm25b	58	69.647	Oryzias_melastigma
ENSLACG00000011845	RBM25	50	90.864	ENSOGAG00000014986	RBM25	53	88.209	Otolemur_garnettii
ENSLACG00000011845	RBM25	50	90.887	ENSOARG00000000319	RBM25	100	82.840	Ovis_aries
ENSLACG00000011845	RBM25	50	91.133	ENSPPAG00000039402	RBM25	100	82.959	Pan_paniscus
ENSLACG00000011845	RBM25	50	90.887	ENSPPRG00000017374	RBM25	100	82.840	Panthera_pardus
ENSLACG00000011845	RBM25	50	90.887	ENSPTIG00000017309	RBM25	100	82.840	Panthera_tigris_altaica
ENSLACG00000011845	RBM25	50	91.133	ENSPTRG00000006509	RBM25	100	82.959	Pan_troglodytes
ENSLACG00000011845	RBM25	50	90.887	ENSPANG00000018212	RBM25	100	82.840	Papio_anubis
ENSLACG00000011845	RBM25	98	78.916	ENSPKIG00000003203	rbm25b	100	79.880	Paramormyrops_kingsleyae
ENSLACG00000011845	RBM25	50	90.887	ENSPSIG00000006058	RBM25	100	81.332	Pelodiscus_sinensis
ENSLACG00000011845	RBM25	55	72.727	ENSPMGG00000015740	rbm25b	59	68.815	Periophthalmus_magnuspinnatus
ENSLACG00000011845	RBM25	50	85.714	ENSPCIG00000011166	RBM25	58	79.744	Phascolarctos_cinereus
ENSLACG00000011845	RBM25	51	73.894	ENSPFOG00000018808	rbm25b	62	67.451	Poecilia_formosa
ENSLACG00000011845	RBM25	98	76.143	ENSPLAG00000018338	rbm25a	60	81.557	Poecilia_latipinna
ENSLACG00000011845	RBM25	98	76.267	ENSPMEG00000024470	rbm25a	60	81.557	Poecilia_mexicana
ENSLACG00000011845	RBM25	51	73.894	ENSPMEG00000019161	rbm25b	59	70.515	Poecilia_mexicana
ENSLACG00000011845	RBM25	51	73.789	ENSPREG00000008522	rbm25b	59	67.008	Poecilia_reticulata
ENSLACG00000011845	RBM25	51	79.673	ENSPREG00000009228	rbm25a	60	81.148	Poecilia_reticulata
ENSLACG00000011845	RBM25	80	90.864	ENSPCAG00000006226	RBM25	81	88.209	Procavia_capensis
ENSLACG00000011845	RBM25	50	90.640	ENSPCOG00000023107	RBM25	100	82.722	Propithecus_coquereli
ENSLACG00000011845	RBM25	50	90.887	ENSPVAG00000003931	RBM25	100	77.160	Pteropus_vampyrus
ENSLACG00000011845	RBM25	55	76.739	ENSPNYG00000022596	rbm25a	51	78.986	Pundamilia_nyererei
ENSLACG00000011845	RBM25	50	90.148	ENSRNOG00000002871	Rbm25l1	55	87.500	Rattus_norvegicus
ENSLACG00000011845	RBM25	50	90.887	ENSRBIG00000039904	RBM25	100	82.840	Rhinopithecus_bieti
ENSLACG00000011845	RBM25	50	90.887	ENSRROG00000035556	RBM25	97	90.423	Rhinopithecus_roxellana
ENSLACG00000011845	RBM25	62	91.810	ENSSBOG00000034153	RBM25	52	72.707	Saimiri_boliviensis_boliviensis
ENSLACG00000011845	RBM25	50	91.872	ENSSHAG00000012859	RBM25	100	81.087	Sarcophilus_harrisii
ENSLACG00000011845	RBM25	54	78.270	ENSSFOG00015007093	rbm25	100	78.872	Scleropages_formosus
ENSLACG00000011845	RBM25	51	74.449	ENSSDUG00000017984	rbm25a	63	75.895	Seriola_dumerili
ENSLACG00000011845	RBM25	52	73.799	ENSSLDG00000024573	rbm25b	96	75.909	Seriola_lalandi_dorsalis
ENSLACG00000011845	RBM25	51	74.449	ENSSLDG00000010342	rbm25a	63	75.895	Seriola_lalandi_dorsalis
ENSLACG00000011845	RBM25	50	90.887	ENSSARG00000002327	RBM25	100	82.840	Sorex_araneus
ENSLACG00000011845	RBM25	55	73.377	ENSSPAG00000016168	rbm25b	56	72.163	Stegastes_partitus
ENSLACG00000011845	RBM25	56	75.983	ENSTRUG00000017964	rbm25b	63	69.920	Takifugu_rubripes
ENSLACG00000011845	RBM25	92	67.975	ENSTNIG00000012222	rbm25b	66	80.676	Tetraodon_nigroviridis
ENSLACG00000011845	RBM25	63	92.929	ENSTBEG00000010538	-	60	92.929	Tupaia_belangeri
ENSLACG00000011845	RBM25	50	82.512	ENSUAMG00000007707	RBM25	100	89.241	Ursus_americanus
ENSLACG00000011845	RBM25	80	88.916	ENSVPAG00000009052	RBM25	85	83.864	Vicugna_pacos
ENSLACG00000011845	RBM25	50	90.887	ENSVVUG00000004426	RBM25	98	82.840	Vulpes_vulpes
ENSLACG00000011845	RBM25	95	72.180	ENSXETG00000021857	rbm25	61	82.051	Xenopus_tropicalis
ENSLACG00000011845	RBM25	98	70.559	ENSXCOG00000002222	rbm25b	56	72.124	Xiphophorus_couchianus
ENSLACG00000011845	RBM25	98	72.894	ENSXMAG00000009077	RBM25	61	81.148	Xiphophorus_maculatus
ENSLACG00000011845	RBM25	98	70.777	ENSXMAG00000017290	rbm25b	59	69.877	Xiphophorus_maculatus