EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000011887 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1662 bases
Position: chrJH127422.1:648143-649804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013501	Exo_endo_phos	PF03372.23	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013597	-	825	-	ENSLACP00000013501	275 (aa)	-	H3AV30

Gene Model

Click here to download ENSLACG00000011887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000011887	-	93	80.769	ENSLACG00000001409	-	95	80.769
ENSLACG00000011887	-	86	80.498	ENSLACG00000012372	-	100	80.498
ENSLACG00000011887	-	99	83.333	ENSLACG00000012713	-	98	83.333
ENSLACG00000011887	-	98	86.081	ENSLACG00000000142	-	97	86.081
ENSLACG00000011887	-	98	61.679	ENSLACG00000014338	-	97	61.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011887	-	100	55.197	ENSACAG00000022765	-	95	55.197	Anolis_carolinensis
ENSLACG00000011887	-	91	56.863	ENSACAG00000027606	-	97	56.863	Anolis_carolinensis
ENSLACG00000011887	-	92	56.250	ENSACAG00000026622	-	97	56.250	Anolis_carolinensis
ENSLACG00000011887	-	93	52.140	ENSACAG00000026078	-	91	52.140	Anolis_carolinensis
ENSLACG00000011887	-	91	54.150	ENSACAG00000026617	-	93	54.150	Anolis_carolinensis
ENSLACG00000011887	-	91	55.422	ENSACAG00000022737	-	94	55.422	Anolis_carolinensis
ENSLACG00000011887	-	100	57.348	ENSACAG00000027999	-	97	57.348	Anolis_carolinensis
ENSLACG00000011887	-	100	53.763	ENSACAG00000022555	-	95	53.763	Anolis_carolinensis
ENSLACG00000011887	-	99	53.261	ENSACAG00000023913	-	97	53.261	Anolis_carolinensis
ENSLACG00000011887	-	100	52.000	ENSACAG00000024197	-	95	52.000	Anolis_carolinensis
ENSLACG00000011887	-	94	48.669	ENSCPBG00000013562	-	68	48.669	Chrysemys_picta_bellii
ENSLACG00000011887	-	93	53.077	ENSMODG00000024667	-	97	53.077	Monodelphis_domestica
ENSLACG00000011887	-	95	52.453	ENSMODG00000024845	-	97	52.453	Monodelphis_domestica
ENSLACG00000011887	-	97	52.768	ENSMODG00000024905	-	95	52.768	Monodelphis_domestica
ENSLACG00000011887	-	97	52.206	ENSMODG00000012913	-	97	52.206	Monodelphis_domestica
ENSLACG00000011887	-	98	48.000	ENSMODG00000024409	-	95	48.000	Monodelphis_domestica