EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011894 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 10881 bases
Position: chrJH126671.1:648720-659600
Accession: 102358851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013508	R3H	PF01424.22	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013604	R3HCC1-201	3577	XM_005991872	ENSLACP00000013508	434 (aa)	XP_005991934	H3AV37

Gene Model

Click here to download ENSLACG00000011894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011894	R3HCC1	97	40.498	ENSG00000104679	R3HCC1	100	58.140	Homo_sapiens
ENSLACG00000011894	R3HCC1	96	35.731	ENSAPOG00000003616	r3hcc1	92	36.591	Acanthochromis_polyacanthus
ENSLACG00000011894	R3HCC1	97	41.020	ENSAMEG00000002963	R3HCC1	89	41.189	Ailuropoda_melanoleuca
ENSLACG00000011894	R3HCC1	62	42.754	ENSACIG00000017144	r3hcc1	84	42.963	Amphilophus_citrinellus
ENSLACG00000011894	R3HCC1	91	35.610	ENSATEG00000023860	r3hcc1	98	35.308	Anabas_testudineus
ENSLACG00000011894	R3HCC1	98	39.606	ENSACAG00000016627	R3HCC1	96	39.912	Anolis_carolinensis
ENSLACG00000011894	R3HCC1	97	39.456	ENSANAG00000036169	R3HCC1	97	40.363	Aotus_nancymaae
ENSLACG00000011894	R3HCC1	97	40.940	ENSBTAG00000025830	R3HCC1	93	40.583	Bos_taurus
ENSLACG00000011894	R3HCC1	97	39.381	ENSCJAG00000020118	R3HCC1	97	38.341	Callithrix_jacchus
ENSLACG00000011894	R3HCC1	97	40.402	ENSCAFG00000009210	R3HCC1	93	42.105	Canis_familiaris
ENSLACG00000011894	R3HCC1	84	38.776	ENSCAFG00020012870	R3HCC1	85	39.487	Canis_lupus_dingo
ENSLACG00000011894	R3HCC1	66	50.993	ENSCHIG00000009107	R3HCC1	97	39.648	Capra_hircus
ENSLACG00000011894	R3HCC1	97	41.270	ENSTSYG00000000511	R3HCC1	75	41.270	Carlito_syrichta
ENSLACG00000011894	R3HCC1	88	31.448	ENSCAPG00000015813	R3HCC1	98	31.448	Cavia_aperea
ENSLACG00000011894	R3HCC1	97	36.515	ENSCPOG00000009696	R3HCC1	98	36.515	Cavia_porcellus
ENSLACG00000011894	R3HCC1	97	38.696	ENSCCAG00000037811	R3HCC1	97	39.408	Cebus_capucinus
ENSLACG00000011894	R3HCC1	97	39.326	ENSCATG00000032971	R3HCC1	97	39.954	Cercocebus_atys
ENSLACG00000011894	R3HCC1	97	38.702	ENSCLAG00000015556	R3HCC1	82	38.702	Chinchilla_lanigera
ENSLACG00000011894	R3HCC1	97	39.909	ENSCSAG00000016250	R3HCC1	89	41.535	Chlorocebus_sabaeus
ENSLACG00000011894	R3HCC1	97	40.000	ENSCHOG00000000396	R3HCC1	93	40.308	Choloepus_hoffmanni
ENSLACG00000011894	R3HCC1	97	41.723	ENSCANG00000029441	R3HCC1	97	41.014	Colobus_angolensis_palliatus
ENSLACG00000011894	R3HCC1	97	36.136	ENSCSEG00000005748	r3hcc1	99	36.136	Cynoglossus_semilaevis
ENSLACG00000011894	R3HCC1	61	42.056	ENSCVAG00000002640	r3hcc1	74	42.056	Cyprinodon_variegatus
ENSLACG00000011894	R3HCC1	74	44.311	ENSDARG00000099593	r3hcc1	84	44.311	Danio_rerio
ENSLACG00000011894	R3HCC1	97	41.124	ENSDNOG00000007168	R3HCC1	89	41.124	Dasypus_novemcinctus
ENSLACG00000011894	R3HCC1	97	36.323	ENSETEG00000001147	R3HCC1	94	36.712	Echinops_telfairi
ENSLACG00000011894	R3HCC1	67	52.941	ENSEASG00005018782	R3HCC1	78	40.576	Equus_asinus_asinus
ENSLACG00000011894	R3HCC1	97	40.217	ENSECAG00000025013	R3HCC1	95	41.266	Equus_caballus
ENSLACG00000011894	R3HCC1	97	40.807	ENSEEUG00000011918	R3HCC1	95	40.487	Erinaceus_europaeus
ENSLACG00000011894	R3HCC1	92	34.845	ENSELUG00000023650	r3hcc1	98	34.845	Esox_lucius
ENSLACG00000011894	R3HCC1	97	41.002	ENSFCAG00000012395	R3HCC1	94	41.485	Felis_catus
ENSLACG00000011894	R3HCC1	72	49.306	ENSGAFG00000008747	-	91	36.142	Gambusia_affinis
ENSLACG00000011894	R3HCC1	97	37.104	ENSGACG00000008447	r3hcc1	95	37.104	Gasterosteus_aculeatus
ENSLACG00000011894	R3HCC1	77	54.491	ENSGAGG00000018009	R3HCC1	52	54.491	Gopherus_agassizii
ENSLACG00000011894	R3HCC1	97	41.002	ENSGGOG00000013817	R3HCC1	97	41.686	Gorilla_gorilla
ENSLACG00000011894	R3HCC1	51	51.190	ENSHBUG00000022250	-	64	51.190	Haplochromis_burtoni
ENSLACG00000011894	R3HCC1	97	38.864	ENSHGLG00000010517	R3HCC1	90	39.551	Heterocephalus_glaber_female
ENSLACG00000011894	R3HCC1	97	38.864	ENSHGLG00100006388	R3HCC1	90	39.551	Heterocephalus_glaber_male
ENSLACG00000011894	R3HCC1	69	48.125	ENSHCOG00000011745	r3hcc1	93	36.659	Hippocampus_comes
ENSLACG00000011894	R3HCC1	66	50.360	ENSIPUG00000024504	r3hcc1	87	38.679	Ictalurus_punctatus
ENSLACG00000011894	R3HCC1	83	54.054	ENSSTOG00000027130	R3HCC1	76	54.054	Ictidomys_tridecemlineatus
ENSLACG00000011894	R3HCC1	60	49.630	ENSKMAG00000000286	r3hcc1	72	47.020	Kryptolebias_marmoratus
ENSLACG00000011894	R3HCC1	98	37.808	ENSLOCG00000015442	r3hcc1	99	38.152	Lepisosteus_oculatus
ENSLACG00000011894	R3HCC1	78	48.428	ENSLAFG00000016137	R3HCC1	69	50.968	Loxodonta_africana
ENSLACG00000011894	R3HCC1	97	39.551	ENSMFAG00000032894	R3HCC1	97	39.723	Macaca_fascicularis
ENSLACG00000011894	R3HCC1	97	39.551	ENSMMUG00000016655	R3HCC1	97	39.723	Macaca_mulatta
ENSLACG00000011894	R3HCC1	97	39.683	ENSMNEG00000043283	R3HCC1	97	39.723	Macaca_nemestrina
ENSLACG00000011894	R3HCC1	97	36.721	ENSMLEG00000030147	R3HCC1	97	39.211	Mandrillus_leucophaeus
ENSLACG00000011894	R3HCC1	61	47.712	ENSMAMG00000018146	r3hcc1	99	35.167	Mastacembelus_armatus
ENSLACG00000011894	R3HCC1	97	38.605	ENSMGAG00000001356	R3HCC1	89	38.605	Meleagris_gallopavo
ENSLACG00000011894	R3HCC1	97	39.381	ENSMICG00000011146	R3HCC1	80	50.980	Microcebus_murinus
ENSLACG00000011894	R3HCC1	66	53.691	ENSMODG00000016809	-	99	35.440	Monodelphis_domestica
ENSLACG00000011894	R3HCC1	65	50.340	MGP_CAROLIEiJ_G0019467	R3hcc1	64	50.345	Mus_caroli
ENSLACG00000011894	R3HCC1	65	50.340	ENSMUSG00000034194	R3hcc1	64	50.345	Mus_musculus
ENSLACG00000011894	R3HCC1	66	50.323	MGP_PahariEiJ_G0030484	R3hcc1	61	50.323	Mus_pahari
ENSLACG00000011894	R3HCC1	65	50.340	MGP_SPRETEiJ_G0020359	R3hcc1	64	50.345	Mus_spretus
ENSLACG00000011894	R3HCC1	97	39.686	ENSMPUG00000003457	R3HCC1	84	40.749	Mustela_putorius_furo
ENSLACG00000011894	R3HCC1	68	49.682	ENSMLUG00000000266	R3HCC1	90	40.355	Myotis_lucifugus
ENSLACG00000011894	R3HCC1	65	52.740	ENSNGAG00000016747	R3hcc1	97	39.606	Nannospalax_galili
ENSLACG00000011894	R3HCC1	90	39.372	ENSNLEG00000015944	R3HCC1	85	40.482	Nomascus_leucogenys
ENSLACG00000011894	R3HCC1	97	40.363	ENSMEUG00000010587	R3HCC1	96	40.590	Notamacropus_eugenii
ENSLACG00000011894	R3HCC1	66	47.059	ENSOPRG00000013390	R3HCC1	92	37.528	Ochotona_princeps
ENSLACG00000011894	R3HCC1	97	38.280	ENSODEG00000007529	R3HCC1	97	38.495	Octodon_degus
ENSLACG00000011894	R3HCC1	97	41.876	ENSOANG00000013877	R3HCC1	94	42.792	Ornithorhynchus_anatinus
ENSLACG00000011894	R3HCC1	66	47.586	ENSOCUG00000023554	R3HCC1	83	37.668	Oryctolagus_cuniculus
ENSLACG00000011894	R3HCC1	61	46.154	ENSORLG00000016816	r3hcc1	73	46.154	Oryzias_latipes
ENSLACG00000011894	R3HCC1	61	46.154	ENSORLG00020012005	r3hcc1	73	46.154	Oryzias_latipes_hni
ENSLACG00000011894	R3HCC1	61	46.154	ENSORLG00015007018	r3hcc1	99	34.532	Oryzias_latipes_hsok
ENSLACG00000011894	R3HCC1	92	31.863	ENSOMEG00000000816	r3hcc1	98	32.598	Oryzias_melastigma
ENSLACG00000011894	R3HCC1	97	40.402	ENSOARG00000010146	R3HCC1	94	40.402	Ovis_aries
ENSLACG00000011894	R3HCC1	97	41.176	ENSPPAG00000033165	R3HCC1	97	41.176	Pan_paniscus
ENSLACG00000011894	R3HCC1	97	41.348	ENSPPRG00000002522	R3HCC1	97	42.826	Panthera_pardus
ENSLACG00000011894	R3HCC1	89	39.614	ENSPTIG00000011230	R3HCC1	93	40.995	Panthera_tigris_altaica
ENSLACG00000011894	R3HCC1	97	40.402	ENSPTRG00000020076	R3HCC1	97	40.498	Pan_troglodytes
ENSLACG00000011894	R3HCC1	97	39.013	ENSPANG00000000453	R3HCC1	97	40.185	Papio_anubis
ENSLACG00000011894	R3HCC1	90	39.163	ENSPKIG00000020397	-	95	39.163	Paramormyrops_kingsleyae
ENSLACG00000011894	R3HCC1	90	38.442	ENSPKIG00000014426	-	95	38.442	Paramormyrops_kingsleyae
ENSLACG00000011894	R3HCC1	99	39.744	ENSPSIG00000017664	R3HCC1	97	39.744	Pelodiscus_sinensis
ENSLACG00000011894	R3HCC1	51	55.422	ENSPMGG00000007792	r3hcc1	99	32.488	Periophthalmus_magnuspinnatus
ENSLACG00000011894	R3HCC1	58	49.664	ENSPCIG00000022718	-	82	37.376	Phascolarctos_cinereus
ENSLACG00000011894	R3HCC1	73	45.752	ENSPFOG00000022301	r3hcc1	71	45.752	Poecilia_formosa
ENSLACG00000011894	R3HCC1	72	46.309	ENSPLAG00000010794	r3hcc1	71	45.752	Poecilia_latipinna
ENSLACG00000011894	R3HCC1	73	45.752	ENSPMEG00000022515	r3hcc1	71	45.752	Poecilia_mexicana
ENSLACG00000011894	R3HCC1	98	34.607	ENSPREG00000000713	r3hcc1	91	34.753	Poecilia_reticulata
ENSLACG00000011894	R3HCC1	89	39.312	ENSPPYG00000018436	R3HCC1	96	40.686	Pongo_abelii
ENSLACG00000011894	R3HCC1	69	51.049	ENSPCAG00000012229	R3HCC1	68	51.049	Procavia_capensis
ENSLACG00000011894	R3HCC1	97	41.355	ENSPCOG00000027554	R3HCC1	97	41.475	Propithecus_coquereli
ENSLACG00000011894	R3HCC1	97	40.257	ENSPVAG00000009829	R3HCC1	93	41.138	Pteropus_vampyrus
ENSLACG00000011894	R3HCC1	61	47.328	ENSPNAG00000023875	r3hcc1	99	34.963	Pygocentrus_nattereri
ENSLACG00000011894	R3HCC1	97	37.759	ENSRNOG00000016777	AABR07018321.1	79	38.608	Rattus_norvegicus
ENSLACG00000011894	R3HCC1	97	40.950	ENSRBIG00000028045	R3HCC1	97	41.348	Rhinopithecus_bieti
ENSLACG00000011894	R3HCC1	97	40.950	ENSRROG00000031126	R3HCC1	97	39.862	Rhinopithecus_roxellana
ENSLACG00000011894	R3HCC1	97	39.955	ENSSBOG00000022590	R3HCC1	97	40.355	Saimiri_boliviensis_boliviensis
ENSLACG00000011894	R3HCC1	97	37.978	ENSSHAG00000016526	-	97	37.978	Sarcophilus_harrisii
ENSLACG00000011894	R3HCC1	92	37.713	ENSSFOG00015013507	r3hcc1	99	38.200	Scleropages_formosus
ENSLACG00000011894	R3HCC1	92	34.588	ENSSMAG00000008647	r3hcc1	99	34.588	Scophthalmus_maximus
ENSLACG00000011894	R3HCC1	68	50.340	ENSSLDG00000019031	r3hcc1	98	38.137	Seriola_lalandi_dorsalis
ENSLACG00000011894	R3HCC1	96	36.156	ENSSPAG00000013497	r3hcc1	99	36.156	Stegastes_partitus
ENSLACG00000011894	R3HCC1	97	38.987	ENSSSCG00000039915	-	90	39.868	Sus_scrofa
ENSLACG00000011894	R3HCC1	99	35.331	ENSSSCG00000037347	-	93	35.282	Sus_scrofa
ENSLACG00000011894	R3HCC1	96	34.112	ENSTRUG00000015880	r3hcc1	98	34.112	Takifugu_rubripes
ENSLACG00000011894	R3HCC1	97	36.923	ENSTTRG00000012247	R3HCC1	93	38.359	Tursiops_truncatus
ENSLACG00000011894	R3HCC1	97	40.807	ENSUAMG00000007344	R3HCC1	97	41.031	Ursus_americanus
ENSLACG00000011894	R3HCC1	97	41.216	ENSVVUG00000005056	R3HCC1	93	43.177	Vulpes_vulpes
ENSLACG00000011894	R3HCC1	65	47.619	ENSXCOG00000017626	r3hcc1	71	47.020	Xiphophorus_couchianus
ENSLACG00000011894	R3HCC1	68	47.260	ENSXMAG00000018375	r3hcc1	92	33.985	Xiphophorus_maculatus