EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011944 (Gene tree)
Gene ID: 102364876
Gene Symbol: -
Alias: -
Full Name: pre-mRNA 3'-end-processing factor FIP1-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 20221 bases
Position: chrJH126790.1:654359-674579
Accession: 102364876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013565	Fip1	PF05182.13	5.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013661	-	1515	XM_005994927	ENSLACP00000013565	504 (aa)	-	H3AV94

Gene Model

Click here to download ENSLACG00000011944's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011944's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011944	-	76	50.000	ENSAPLG00000003042	-	51	75.000	Anas_platyrhynchos
ENSLACG00000011944	-	76	63.861	ENSCAPG00000009569	-	55	54.202	Cavia_aperea
ENSLACG00000011944	-	97	41.929	ENSMALG00000000838	fip1l1b	51	64.286	Monopterus_albus
ENSLACG00000011944	-	96	41.503	ENSOANG00000003384	-	51	75.000	Ornithorhynchus_anatinus
ENSLACG00000011944	-	53	56.410	ENSPKIG00000003396	fip1l1b	53	69.231	Paramormyrops_kingsleyae
ENSLACG00000011944	-	50	40.476	ENSPNAG00000009853	fip1l1a	53	44.388	Pygocentrus_nattereri
ENSLACG00000011944	-	74	49.609	ENSTNIG00000004104	fip1l1b	50	64.286	Tetraodon_nigroviridis