EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000011991 (Gene tree)
Gene ID: 102350201
Gene Symbol: fip1l1a
Alias: si:dkey-161n17.1
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 109536 bases
Position: chrJH127344.1:660832-770367
Accession: 102350201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013623	Fip1	PF05182.13	1.4e-25	1	1
ENSLACP00000013624	Fip1	PF05182.13	1.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013721	-	1593	-	ENSLACP00000013624	530 (aa)	-	H3AVF3
ENSLACT00000013720	-	3647	XM_006002272	ENSLACP00000013623	532 (aa)	XP_006002334	H3AVF2

Gene Model

Click here to download ENSLACG00000011991's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000011991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000011991	fip1l1a	67	76.842	ENSACIG00000001454	fip1l1b	90	76.842	Amphilophus_citrinellus
ENSLACG00000011991	fip1l1a	96	59.680	ENSAPEG00000022229	fip1l1b	96	60.405	Amphiprion_percula
ENSLACG00000011991	fip1l1a	96	63.910	ENSATEG00000021757	fip1l1b	96	63.308	Anabas_testudineus
ENSLACG00000011991	fip1l1a	84	42.286	ENSAPLG00000008548	-	99	41.856	Anas_platyrhynchos
ENSLACG00000011991	fip1l1a	92	60.144	ENSAPLG00000003042	-	100	59.720	Anas_platyrhynchos
ENSLACG00000011991	fip1l1a	85	69.588	ENSACAG00000010556	-	86	71.947	Anolis_carolinensis
ENSLACG00000011991	fip1l1a	96	62.289	ENSACLG00000010418	fip1l1b	96	62.429	Astatotilapia_calliptera
ENSLACG00000011991	fip1l1a	53	42.857	ENSAMXG00000031045	fip1l1a	74	44.800	Astyanax_mexicanus
ENSLACG00000011991	fip1l1a	54	57.367	ENSAMXG00000011126	fip1l1b	89	60.424	Astyanax_mexicanus
ENSLACG00000011991	fip1l1a	53	69.686	ENSBTAG00000020653	FIP1L1	100	71.296	Bos_taurus
ENSLACG00000011991	fip1l1a	82	69.636	ENSCAPG00000009569	-	89	69.512	Cavia_aperea
ENSLACG00000011991	fip1l1a	74	71.503	ENSCPOG00000010770	-	97	70.980	Cavia_porcellus
ENSLACG00000011991	fip1l1a	99	66.946	ENSCPBG00000025019	-	96	67.472	Chrysemys_picta_bellii
ENSLACG00000011991	fip1l1a	97	62.136	ENSCGRG00001018568	Fip1l1	100	68.705	Cricetulus_griseus_chok1gshd
ENSLACG00000011991	fip1l1a	97	62.136	ENSCGRG00000000208	Fip1l1	100	68.705	Cricetulus_griseus_crigri
ENSLACG00000011991	fip1l1a	96	62.782	ENSCSEG00000006583	fip1l1b	96	62.167	Cynoglossus_semilaevis
ENSLACG00000011991	fip1l1a	96	63.364	ENSCVAG00000023435	fip1l1b	96	61.815	Cyprinodon_variegatus
ENSLACG00000011991	fip1l1a	96	57.042	ENSDARG00000070431	fip1l1b	96	55.516	Danio_rerio
ENSLACG00000011991	fip1l1a	71	60.169	ENSDARG00000043328	fip1l1a	82	60.169	Danio_rerio
ENSLACG00000011991	fip1l1a	83	65.657	ENSETEG00000018271	-	90	61.355	Echinops_telfairi
ENSLACG00000011991	fip1l1a	97	63.158	ENSEASG00005019566	-	100	67.904	Equus_asinus_asinus
ENSLACG00000011991	fip1l1a	65	61.739	ENSEEUG00000004965	-	68	57.789	Erinaceus_europaeus
ENSLACG00000011991	fip1l1a	95	51.048	ENSELUG00000004607	fip1l1a	95	50.289	Esox_lucius
ENSLACG00000011991	fip1l1a	96	59.555	ENSFHEG00000003843	fip1l1b	96	60.149	Fundulus_heteroclitus
ENSLACG00000011991	fip1l1a	99	54.417	ENSGMOG00000004913	fip1l1b	95	54.159	Gadus_morhua
ENSLACG00000011991	fip1l1a	73	34.359	ENSGMOG00000012065	-	54	40.500	Gadus_morhua
ENSLACG00000011991	fip1l1a	99	68.657	ENSGALG00000013943	-	96	69.380	Gallus_gallus
ENSLACG00000011991	fip1l1a	96	61.426	ENSGAFG00000008253	fip1l1b	96	59.519	Gambusia_affinis
ENSLACG00000011991	fip1l1a	96	53.451	ENSGACG00000015946	fip1l1b	96	52.880	Gasterosteus_aculeatus
ENSLACG00000011991	fip1l1a	97	62.548	ENSGAGG00000009763	-	96	67.658	Gopherus_agassizii
ENSLACG00000011991	fip1l1a	96	62.289	ENSHBUG00000013978	fip1l1b	98	60.561	Haplochromis_burtoni
ENSLACG00000011991	fip1l1a	96	62.991	ENSHCOG00000015834	fip1l1b	95	62.004	Hippocampus_comes
ENSLACG00000011991	fip1l1a	88	65.789	ENSIPUG00000022454	fip1l1b	93	63.351	Ictalurus_punctatus
ENSLACG00000011991	fip1l1a	96	61.869	ENSKMAG00000021938	fip1l1b	96	61.248	Kryptolebias_marmoratus
ENSLACG00000011991	fip1l1a	96	59.049	ENSLBEG00000028819	fip1l1b	96	59.963	Labrus_bergylta
ENSLACG00000011991	fip1l1a	99	61.121	ENSLOCG00000014127	fip1l1b	96	60.215	Lepisosteus_oculatus
ENSLACG00000011991	fip1l1a	95	42.755	ENSLOCG00000015223	-	83	37.297	Lepisosteus_oculatus
ENSLACG00000011991	fip1l1a	96	62.406	ENSMAMG00000004535	fip1l1b	95	62.928	Mastacembelus_armatus
ENSLACG00000011991	fip1l1a	96	62.477	ENSMZEG00005023828	fip1l1b	96	62.429	Maylandia_zebra
ENSLACG00000011991	fip1l1a	88	46.021	ENSMGAG00000005822	-	95	37.726	Meleagris_gallopavo
ENSLACG00000011991	fip1l1a	99	64.057	ENSMAUG00000010526	Fip1l1	100	65.445	Mesocricetus_auratus
ENSLACG00000011991	fip1l1a	97	62.524	ENSMOCG00000008020	Fip1l1	100	67.086	Microtus_ochrogaster
ENSLACG00000011991	fip1l1a	90	51.613	ENSMMOG00000008262	fip1l1b	87	51.829	Mola_mola
ENSLACG00000011991	fip1l1a	63	66.038	ENSMODG00000020654	-	84	63.556	Monodelphis_domestica
ENSLACG00000011991	fip1l1a	96	52.996	ENSMALG00000000838	fip1l1b	89	56.025	Monopterus_albus
ENSLACG00000011991	fip1l1a	97	62.136	MGP_CAROLIEiJ_G0027304	Fip1l1	100	68.885	Mus_caroli
ENSLACG00000011991	fip1l1a	97	62.136	ENSMUSG00000029227	Fip1l1	100	68.885	Mus_musculus
ENSLACG00000011991	fip1l1a	97	62.136	MGP_PahariEiJ_G0017085	Fip1l1	100	68.885	Mus_pahari
ENSLACG00000011991	fip1l1a	97	62.136	MGP_SPRETEiJ_G0028299	Fip1l1	100	68.885	Mus_spretus
ENSLACG00000011991	fip1l1a	97	63.548	ENSNGAG00000008849	Fip1l1	100	69.134	Nannospalax_galili
ENSLACG00000011991	fip1l1a	96	60.254	ENSNBRG00000017832	fip1l1b	96	60.367	Neolamprologus_brichardi
ENSLACG00000011991	fip1l1a	96	60.256	ENSONIG00000008785	fip1l1b	96	60.000	Oreochromis_niloticus
ENSLACG00000011991	fip1l1a	96	61.731	ENSOANG00000003384	-	75	59.251	Ornithorhynchus_anatinus
ENSLACG00000011991	fip1l1a	96	62.477	ENSORLG00000004397	fip1l1b	96	61.670	Oryzias_latipes
ENSLACG00000011991	fip1l1a	96	62.664	ENSORLG00020008716	fip1l1b	96	61.860	Oryzias_latipes_hni
ENSLACG00000011991	fip1l1a	99	61.775	ENSORLG00015006736	fip1l1b	96	61.860	Oryzias_latipes_hsok
ENSLACG00000011991	fip1l1a	96	47.122	ENSOMEG00000015730	fip1l1b	69	61.828	Oryzias_melastigma
ENSLACG00000011991	fip1l1a	97	56.852	ENSPKIG00000003396	fip1l1b	87	52.299	Paramormyrops_kingsleyae
ENSLACG00000011991	fip1l1a	96	55.844	ENSPMGG00000017028	fip1l1b	86	52.290	Periophthalmus_magnuspinnatus
ENSLACG00000011991	fip1l1a	97	62.136	ENSPEMG00000002025	Fip1l1	100	68.345	Peromyscus_maniculatus_bairdii
ENSLACG00000011991	fip1l1a	63	60.961	ENSPCIG00000019318	-	97	62.215	Phascolarctos_cinereus
ENSLACG00000011991	fip1l1a	96	59.083	ENSPFOG00000014745	fip1l1b	96	59.926	Poecilia_formosa
ENSLACG00000011991	fip1l1a	96	58.899	ENSPLAG00000010954	fip1l1b	96	59.444	Poecilia_latipinna
ENSLACG00000011991	fip1l1a	96	58.899	ENSPMEG00000019187	fip1l1b	96	59.369	Poecilia_mexicana
ENSLACG00000011991	fip1l1a	72	53.061	ENSPREG00000012535	fip1l1b	74	52.094	Poecilia_reticulata
ENSLACG00000011991	fip1l1a	50	58.882	ENSPNYG00000015976	fip1l1b	76	59.028	Pundamilia_nyererei
ENSLACG00000011991	fip1l1a	50	58.940	ENSPNAG00000015341	fip1l1b	64	57.895	Pygocentrus_nattereri
ENSLACG00000011991	fip1l1a	57	42.857	ENSPNAG00000009853	fip1l1a	71	45.935	Pygocentrus_nattereri
ENSLACG00000011991	fip1l1a	97	62.136	ENSRNOG00000002275	Fip1l1	100	66.906	Rattus_norvegicus
ENSLACG00000011991	fip1l1a	97	66.537	ENSSHAG00000015789	-	96	62.721	Sarcophilus_harrisii
ENSLACG00000011991	fip1l1a	51	45.875	ENSSFOG00015010948	-	55	57.282	Scleropages_formosus
ENSLACG00000011991	fip1l1a	88	54.430	ENSSFOG00015017653	fip1l1b	81	60.976	Scleropages_formosus
ENSLACG00000011991	fip1l1a	96	63.138	ENSSMAG00000013444	fip1l1b	96	62.715	Scophthalmus_maximus
ENSLACG00000011991	fip1l1a	96	62.594	ENSSDUG00000004117	fip1l1b	96	62.548	Seriola_dumerili
ENSLACG00000011991	fip1l1a	96	63.208	ENSSLDG00000024099	fip1l1b	96	62.977	Seriola_lalandi_dorsalis
ENSLACG00000011991	fip1l1a	82	70.984	ENSSARG00000001973	-	89	70.408	Sorex_araneus
ENSLACG00000011991	fip1l1a	50	67.790	ENSSPUG00000017328	-	92	67.416	Sphenodon_punctatus
ENSLACG00000011991	fip1l1a	96	59.927	ENSSPAG00000017564	fip1l1b	96	60.589	Stegastes_partitus
ENSLACG00000011991	fip1l1a	99	60.507	ENSTRUG00000001545	fip1l1b	96	61.174	Takifugu_rubripes
ENSLACG00000011991	fip1l1a	99	55.593	ENSTNIG00000004104	fip1l1b	96	56.696	Tetraodon_nigroviridis
ENSLACG00000011991	fip1l1a	94	64.659	ENSUMAG00000002758	-	99	66.089	Ursus_maritimus
ENSLACG00000011991	fip1l1a	83	70.408	ENSVPAG00000011574	-	86	70.408	Vicugna_pacos
ENSLACG00000011991	fip1l1a	81	62.418	ENSXETG00000011679	fip1l1	79	59.073	Xenopus_tropicalis
ENSLACG00000011991	fip1l1a	96	50.860	ENSXCOG00000013656	fip1l1b	85	43.520	Xiphophorus_couchianus
ENSLACG00000011991	fip1l1a	96	62.018	ENSXMAG00000017620	fip1l1b	96	60.111	Xiphophorus_maculatus