EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1930 bases
Position: chrJH127083.1:677373-679302
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013755	RVT_1	PF00078.27	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013852	-	1638	-	ENSLACP00000013755	546 (aa)	-	H3AVT4

Gene Model

Click here to download ENSLACG00000012109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012109	-	99	31.327	ENSLACG00000018782	-	67	31.327
ENSLACG00000012109	-	99	32.302	ENSLACG00000006413	-	75	32.302
ENSLACG00000012109	-	50	31.597	ENSLACG00000001892	-	83	31.597
ENSLACG00000012109	-	72	43.446	ENSLACG00000007522	-	61	43.446
ENSLACG00000012109	-	99	40.722	ENSLACG00000008450	-	77	40.722
ENSLACG00000012109	-	90	30.740	ENSLACG00000016441	-	68	30.740
ENSLACG00000012109	-	60	36.735	ENSLACG00000015201	-	58	36.735
ENSLACG00000012109	-	99	39.531	ENSLACG00000010043	-	70	39.531
ENSLACG00000012109	-	85	37.500	ENSLACG00000009347	-	77	37.500
ENSLACG00000012109	-	100	72.066	ENSLACG00000009524	-	66	72.397
ENSLACG00000012109	-	80	40.000	ENSLACG00000011297	-	58	40.000
ENSLACG00000012109	-	99	32.040	ENSLACG00000003991	-	66	32.040
ENSLACG00000012109	-	75	32.558	ENSLACG00000018380	-	60	32.558
ENSLACG00000012109	-	56	50.904	ENSLACG00000005365	-	75	50.904
ENSLACG00000012109	-	100	30.139	ENSLACG00000006151	-	68	30.139

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012109	-	97	39.418	ENSAPOG00000015320	-	52	39.418	Acanthochromis_polyacanthus
ENSLACG00000012109	-	99	31.763	ENSAPEG00000015494	-	50	32.067	Amphiprion_percula
ENSLACG00000012109	-	90	41.239	ENSAPEG00000002572	-	59	41.239	Amphiprion_percula
ENSLACG00000012109	-	60	41.463	ENSAPEG00000006765	-	57	41.351	Amphiprion_percula
ENSLACG00000012109	-	50	32.302	ENSAPEG00000005752	-	68	32.302	Amphiprion_percula
ENSLACG00000012109	-	60	33.429	ENSAPEG00000014949	-	50	33.429	Amphiprion_percula
ENSLACG00000012109	-	72	35.763	ENSATEG00000016298	-	60	30.346	Anabas_testudineus
ENSLACG00000012109	-	99	35.265	ENSATEG00000018698	-	54	35.265	Anabas_testudineus
ENSLACG00000012109	-	83	35.263	ENSATEG00000006997	-	53	35.263	Anabas_testudineus
ENSLACG00000012109	-	99	34.488	ENSACLG00000027627	-	50	34.488	Astatotilapia_calliptera
ENSLACG00000012109	-	99	41.812	ENSACLG00000013947	-	59	41.812	Astatotilapia_calliptera
ENSLACG00000012109	-	100	34.609	ENSACLG00000018454	-	56	34.916	Astatotilapia_calliptera
ENSLACG00000012109	-	60	42.742	ENSACLG00000005847	-	50	42.742	Astatotilapia_calliptera
ENSLACG00000012109	-	97	37.401	ENSACLG00000008010	-	50	37.401	Astatotilapia_calliptera
ENSLACG00000012109	-	99	43.216	ENSACLG00000014688	-	51	43.216	Astatotilapia_calliptera
ENSLACG00000012109	-	56	32.198	ENSACLG00000009861	-	64	31.988	Astatotilapia_calliptera
ENSLACG00000012109	-	85	33.871	ENSACLG00000021355	-	61	33.871	Astatotilapia_calliptera
ENSLACG00000012109	-	84	35.853	ENSACLG00000014740	-	60	35.853	Astatotilapia_calliptera
ENSLACG00000012109	-	99	31.811	ENSACLG00000016581	-	52	31.811	Astatotilapia_calliptera
ENSLACG00000012109	-	99	33.125	ENSACLG00000001267	-	56	33.125	Astatotilapia_calliptera
ENSLACG00000012109	-	60	39.595	ENSACLG00000020385	-	60	39.595	Astatotilapia_calliptera
ENSLACG00000012109	-	57	32.012	ENSACLG00000013847	-	74	32.012	Astatotilapia_calliptera
ENSLACG00000012109	-	85	31.661	ENSACLG00000017258	-	57	31.661	Astatotilapia_calliptera
ENSLACG00000012109	-	85	31.298	ENSACLG00000024556	-	63	31.298	Astatotilapia_calliptera
ENSLACG00000012109	-	51	32.997	ENSACLG00000013289	-	87	32.997	Astatotilapia_calliptera
ENSLACG00000012109	-	56	30.745	ENSACLG00000001380	-	54	30.745	Astatotilapia_calliptera
ENSLACG00000012109	-	99	42.602	ENSAMXG00000033912	-	51	42.602	Astyanax_mexicanus
ENSLACG00000012109	-	86	41.077	ENSAMXG00000038033	-	52	41.077	Astyanax_mexicanus
ENSLACG00000012109	-	60	35.817	ENSAMXG00000040471	-	53	35.817	Astyanax_mexicanus
ENSLACG00000012109	-	88	41.818	ENSAMXG00000041896	-	77	41.818	Astyanax_mexicanus
ENSLACG00000012109	-	57	31.098	ENSAMXG00000031032	-	86	31.098	Astyanax_mexicanus
ENSLACG00000012109	-	62	37.984	ENSAMXG00000041465	-	52	37.984	Astyanax_mexicanus
ENSLACG00000012109	-	57	31.498	ENSAMXG00000038502	-	66	31.498	Astyanax_mexicanus
ENSLACG00000012109	-	98	38.378	ENSAMXG00000039473	-	51	38.378	Astyanax_mexicanus
ENSLACG00000012109	-	99	33.005	ENSAMXG00000039114	-	59	33.005	Astyanax_mexicanus
ENSLACG00000012109	-	88	41.941	ENSAMXG00000033197	-	76	41.941	Astyanax_mexicanus
ENSLACG00000012109	-	92	36.047	ENSAMXG00000043821	-	73	36.047	Astyanax_mexicanus
ENSLACG00000012109	-	98	39.353	ENSAMXG00000038480	-	81	39.353	Astyanax_mexicanus
ENSLACG00000012109	-	85	49.828	ENSAMXG00000035923	-	62	49.828	Astyanax_mexicanus
ENSLACG00000012109	-	99	42.241	ENSAMXG00000032559	-	50	42.241	Astyanax_mexicanus
ENSLACG00000012109	-	88	40.909	ENSAMXG00000041114	-	60	40.909	Astyanax_mexicanus
ENSLACG00000012109	-	99	44.271	ENSAMXG00000037864	-	50	44.271	Astyanax_mexicanus
ENSLACG00000012109	-	96	38.482	ENSAMXG00000036113	-	52	38.482	Astyanax_mexicanus
ENSLACG00000012109	-	56	31.988	ENSAMXG00000039106	-	62	31.988	Astyanax_mexicanus
ENSLACG00000012109	-	65	37.566	ENSCPBG00000001369	-	66	37.566	Chrysemys_picta_bellii
ENSLACG00000012109	-	60	34.857	ENSCPBG00000001119	-	75	35.429	Chrysemys_picta_bellii
ENSLACG00000012109	-	79	42.812	ENSCVAG00000020907	-	62	42.812	Cyprinodon_variegatus
ENSLACG00000012109	-	52	37.294	ENSCVAG00000001415	-	79	37.294	Cyprinodon_variegatus
ENSLACG00000012109	-	51	32.323	ENSGAGG00000011063	-	60	32.323	Gopherus_agassizii
ENSLACG00000012109	-	63	37.432	ENSGAGG00000013650	-	65	37.432	Gopherus_agassizii
ENSLACG00000012109	-	56	30.154	ENSHBUG00000009088	-	88	30.154	Haplochromis_burtoni
ENSLACG00000012109	-	56	34.985	ENSHCOG00000019997	-	57	34.985	Hippocampus_comes
ENSLACG00000012109	-	66	31.510	ENSIPUG00000003645	-	77	31.510	Ictalurus_punctatus
ENSLACG00000012109	-	55	30.503	ENSKMAG00000007574	-	61	30.503	Kryptolebias_marmoratus
ENSLACG00000012109	-	51	32.226	ENSLOCG00000017292	-	89	32.226	Lepisosteus_oculatus
ENSLACG00000012109	-	60	33.807	ENSMAMG00000019918	-	57	33.807	Mastacembelus_armatus
ENSLACG00000012109	-	74	30.819	ENSMAMG00000004646	-	99	30.819	Mastacembelus_armatus
ENSLACG00000012109	-	88	33.209	ENSMAMG00000021634	-	79	33.209	Mastacembelus_armatus
ENSLACG00000012109	-	60	41.081	ENSMAMG00000016004	-	72	41.081	Mastacembelus_armatus
ENSLACG00000012109	-	56	31.579	ENSMZEG00005023829	-	64	31.366	Maylandia_zebra
ENSLACG00000012109	-	99	38.583	ENSMZEG00005025542	-	50	38.583	Maylandia_zebra
ENSLACG00000012109	-	80	36.437	ENSMZEG00005008378	-	67	36.437	Maylandia_zebra
ENSLACG00000012109	-	60	40.860	ENSMZEG00005017878	-	57	40.860	Maylandia_zebra
ENSLACG00000012109	-	99	31.810	ENSMZEG00005024252	-	69	31.810	Maylandia_zebra
ENSLACG00000012109	-	96	40.541	ENSMZEG00005023862	-	51	40.541	Maylandia_zebra
ENSLACG00000012109	-	53	33.441	ENSNBRG00000002791	-	100	33.441	Neolamprologus_brichardi
ENSLACG00000012109	-	52	30.872	ENSNBRG00000002477	-	87	30.872	Neolamprologus_brichardi
ENSLACG00000012109	-	56	38.798	ENSORLG00000022742	-	99	38.798	Oryzias_latipes
ENSLACG00000012109	-	99	41.842	ENSORLG00000025397	-	61	41.842	Oryzias_latipes
ENSLACG00000012109	-	99	40.811	ENSORLG00000024878	-	63	40.811	Oryzias_latipes
ENSLACG00000012109	-	87	38.037	ENSORLG00000025268	-	62	38.037	Oryzias_latipes
ENSLACG00000012109	-	55	31.034	ENSORLG00000027443	-	54	31.034	Oryzias_latipes
ENSLACG00000012109	-	90	41.615	ENSORLG00000029184	-	66	41.615	Oryzias_latipes
ENSLACG00000012109	-	60	31.073	ENSORLG00000027869	-	75	31.073	Oryzias_latipes
ENSLACG00000012109	-	53	40.584	ENSORLG00020021288	-	95	40.584	Oryzias_latipes_hni
ENSLACG00000012109	-	51	33.882	ENSORLG00020000154	-	72	33.882	Oryzias_latipes_hni
ENSLACG00000012109	-	57	32.515	ENSORLG00020009127	-	63	32.515	Oryzias_latipes_hni
ENSLACG00000012109	-	99	31.148	ENSORLG00020016695	-	82	31.148	Oryzias_latipes_hni
ENSLACG00000012109	-	59	35.362	ENSORLG00020016924	-	80	35.362	Oryzias_latipes_hni
ENSLACG00000012109	-	57	32.635	ENSORLG00020012706	-	82	32.635	Oryzias_latipes_hni
ENSLACG00000012109	-	83	46.209	ENSORLG00020018561	-	51	46.209	Oryzias_latipes_hni
ENSLACG00000012109	-	95	41.398	ENSORLG00020017608	-	52	41.398	Oryzias_latipes_hni
ENSLACG00000012109	-	99	32.969	ENSORLG00020015203	-	59	33.125	Oryzias_latipes_hni
ENSLACG00000012109	-	60	38.342	ENSORLG00020004454	-	99	38.342	Oryzias_latipes_hni
ENSLACG00000012109	-	99	41.860	ENSORLG00020007648	-	51	41.860	Oryzias_latipes_hni
ENSLACG00000012109	-	55	31.447	ENSORLG00015021822	-	85	31.193	Oryzias_latipes_hsok
ENSLACG00000012109	-	99	31.981	ENSORLG00015000130	-	54	31.981	Oryzias_latipes_hsok
ENSLACG00000012109	-	99	42.689	ENSORLG00015022011	-	55	42.689	Oryzias_latipes_hsok
ENSLACG00000012109	-	99	43.967	ENSORLG00015001207	-	50	43.967	Oryzias_latipes_hsok
ENSLACG00000012109	-	99	33.224	ENSORLG00015008388	-	64	33.879	Oryzias_latipes_hsok
ENSLACG00000012109	-	99	41.860	ENSORLG00015012565	-	56	41.860	Oryzias_latipes_hsok
ENSLACG00000012109	-	91	38.690	ENSORLG00015000379	-	70	38.690	Oryzias_latipes_hsok
ENSLACG00000012109	-	52	31.410	ENSORLG00015009803	-	63	31.410	Oryzias_latipes_hsok
ENSLACG00000012109	-	60	34.375	ENSORLG00015008138	-	66	34.375	Oryzias_latipes_hsok
ENSLACG00000012109	-	90	31.034	ENSORLG00015022127	-	67	31.034	Oryzias_latipes_hsok
ENSLACG00000012109	-	92	31.393	ENSORLG00015013109	-	93	31.393	Oryzias_latipes_hsok
ENSLACG00000012109	-	56	30.675	ENSOMEG00000013437	-	55	30.675	Oryzias_melastigma
ENSLACG00000012109	-	95	43.182	ENSOMEG00000012600	-	68	43.182	Oryzias_melastigma
ENSLACG00000012109	-	97	40.000	ENSOMEG00000000573	-	50	40.000	Oryzias_melastigma
ENSLACG00000012109	-	95	33.907	ENSOMEG00000013479	-	94	33.907	Oryzias_melastigma
ENSLACG00000012109	-	85	32.427	ENSPKIG00000021090	-	58	32.427	Paramormyrops_kingsleyae
ENSLACG00000012109	-	99	37.792	ENSPKIG00000007924	-	67	37.792	Paramormyrops_kingsleyae
ENSLACG00000012109	-	60	34.091	ENSPKIG00000015048	-	50	34.091	Paramormyrops_kingsleyae
ENSLACG00000012109	-	99	32.371	ENSPKIG00000013624	-	55	32.371	Paramormyrops_kingsleyae
ENSLACG00000012109	-	98	32.759	ENSPKIG00000012990	-	93	32.915	Paramormyrops_kingsleyae
ENSLACG00000012109	-	56	31.677	ENSPKIG00000007140	-	73	31.677	Paramormyrops_kingsleyae
ENSLACG00000012109	-	88	31.306	ENSPKIG00000006120	-	61	31.306	Paramormyrops_kingsleyae
ENSLACG00000012109	-	53	41.026	ENSPSIG00000000367	-	70	41.026	Pelodiscus_sinensis
ENSLACG00000012109	-	61	38.352	ENSPSIG00000001757	-	86	38.352	Pelodiscus_sinensis
ENSLACG00000012109	-	60	39.306	ENSPSIG00000001197	-	84	39.306	Pelodiscus_sinensis
ENSLACG00000012109	-	61	38.636	ENSPSIG00000001614	-	50	38.636	Pelodiscus_sinensis
ENSLACG00000012109	-	53	39.935	ENSPSIG00000014032	-	89	39.935	Pelodiscus_sinensis
ENSLACG00000012109	-	53	40.645	ENSPSIG00000001800	-	68	40.645	Pelodiscus_sinensis
ENSLACG00000012109	-	60	38.857	ENSPSIG00000000193	-	69	38.857	Pelodiscus_sinensis
ENSLACG00000012109	-	60	38.286	ENSPSIG00000001205	-	75	38.286	Pelodiscus_sinensis
ENSLACG00000012109	-	61	62.254	ENSPSIG00000000226	-	67	62.254	Pelodiscus_sinensis
ENSLACG00000012109	-	58	37.202	ENSPSIG00000001249	-	96	37.202	Pelodiscus_sinensis
ENSLACG00000012109	-	99	33.333	ENSPMEG00000008618	-	53	33.333	Poecilia_mexicana
ENSLACG00000012109	-	57	33.537	ENSPMEG00000018862	-	65	33.537	Poecilia_mexicana
ENSLACG00000012109	-	100	44.103	ENSPMEG00000023031	-	57	44.103	Poecilia_mexicana
ENSLACG00000012109	-	70	31.707	ENSPREG00000005117	-	95	31.707	Poecilia_reticulata
ENSLACG00000012109	-	85	31.181	ENSPREG00000006650	-	98	31.181	Poecilia_reticulata
ENSLACG00000012109	-	99	41.265	ENSPREG00000006496	-	84	41.265	Poecilia_reticulata
ENSLACG00000012109	-	99	33.497	ENSPREG00000006122	-	80	33.497	Poecilia_reticulata
ENSLACG00000012109	-	98	51.524	ENSPREG00000006052	-	51	51.524	Poecilia_reticulata
ENSLACG00000012109	-	60	34.551	ENSPNAG00000009058	-	70	34.551	Pygocentrus_nattereri
ENSLACG00000012109	-	99	42.788	ENSPNAG00000021509	-	62	42.788	Pygocentrus_nattereri
ENSLACG00000012109	-	53	31.596	ENSPNAG00000015949	-	79	31.596	Pygocentrus_nattereri
ENSLACG00000012109	-	60	39.896	ENSSFOG00015024061	-	62	39.896	Scleropages_formosus
ENSLACG00000012109	-	99	34.272	ENSSDUG00000010009	-	60	34.272	Seriola_dumerili
ENSLACG00000012109	-	97	42.241	ENSSLDG00000003503	-	52	42.241	Seriola_lalandi_dorsalis
ENSLACG00000012109	-	54	30.745	ENSTRUG00000024803	-	60	30.745	Takifugu_rubripes
ENSLACG00000012109	-	99	44.553	ENSXMAG00000022159	-	51	44.553	Xiphophorus_maculatus
ENSLACG00000012109	-	95	41.351	ENSXMAG00000023370	-	50	41.351	Xiphophorus_maculatus
ENSLACG00000012109	-	54	38.024	ENSXMAG00000027711	-	99	38.024	Xiphophorus_maculatus
ENSLACG00000012109	-	95	41.351	ENSXMAG00000029360	-	56	41.351	Xiphophorus_maculatus
ENSLACG00000012109	-	96	38.275	ENSXMAG00000024180	-	55	38.275	Xiphophorus_maculatus