EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012207 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 11437 bases
Position: chrJH126677.1:689590-701026
Accession: 102365811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013865	zf-C2H2	PF00096.26	3.1e-29	1	6
ENSLACP00000013865	zf-C2H2	PF00096.26	3.1e-29	2	6
ENSLACP00000013865	zf-C2H2	PF00096.26	3.1e-29	3	6
ENSLACP00000013865	zf-C2H2	PF00096.26	3.1e-29	4	6
ENSLACP00000013865	zf-C2H2	PF00096.26	3.1e-29	5	6
ENSLACP00000013865	zf-C2H2	PF00096.26	3.1e-29	6	6
ENSLACP00000013865	zf-met	PF12874.7	9.1e-09	1	2
ENSLACP00000013865	zf-met	PF12874.7	9.1e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013962	GFI1B-201	984	XM_005992076	ENSLACP00000013865	327 (aa)	XP_005992138	H3AW44

Gene Model

Click here to download ENSLACG00000012207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012207's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012207	GFI1B	51	44.595	ENSLACG00000003588	SCRT1	53	44.595
ENSLACG00000012207	GFI1B	67	43.478	ENSLACG00000004191	-	77	43.478
ENSLACG00000012207	GFI1B	53	34.454	ENSLACG00000017707	SNAI1	55	40.541
ENSLACG00000012207	GFI1B	59	42.012	ENSLACG00000022211	-	76	42.012
ENSLACG00000012207	GFI1B	50	78.313	ENSLACG00000017590	-	99	46.154
ENSLACG00000012207	GFI1B	70	39.850	ENSLACG00000009642	-	99	39.850
ENSLACG00000012207	GFI1B	62	39.535	ENSLACG00000017381	-	94	39.535
ENSLACG00000012207	GFI1B	59	38.679	ENSLACG00000012406	ZNF423	58	38.679
ENSLACG00000012207	GFI1B	53	43.210	ENSLACG00000010025	ZNF581	89	43.210
ENSLACG00000012207	GFI1B	55	38.095	ENSLACG00000007021	ZNF521	50	38.095
ENSLACG00000012207	GFI1B	65	40.000	ENSLACG00000007310	-	99	40.000
ENSLACG00000012207	GFI1B	61	39.752	ENSLACG00000009187	PRDM5	83	39.752
ENSLACG00000012207	GFI1B	52	39.806	ENSLACG00000005264	-	97	39.806
ENSLACG00000012207	GFI1B	59	45.033	ENSLACG00000014708	-	59	45.033
ENSLACG00000012207	GFI1B	53	38.532	ENSLACG00000010161	MAZ	52	38.532
ENSLACG00000012207	GFI1B	59	39.535	ENSLACG00000009005	-	99	42.202
ENSLACG00000012207	GFI1B	60	40.845	ENSLACG00000000891	ZNF319	93	40.845
ENSLACG00000012207	GFI1B	100	50.614	ENSLACG00000013362	GFI1	98	50.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012207	GFI1B	100	60.714	ENSAPOG00000001296	gfi1b	100	60.714	Acanthochromis_polyacanthus
ENSLACG00000012207	GFI1B	99	57.187	ENSACIG00000002190	gfi1b	99	57.187	Amphilophus_citrinellus
ENSLACG00000012207	GFI1B	100	62.121	ENSAOCG00000021187	gfi1b	100	62.121	Amphiprion_ocellaris
ENSLACG00000012207	GFI1B	100	62.121	ENSAPEG00000016196	gfi1b	100	62.121	Amphiprion_percula
ENSLACG00000012207	GFI1B	100	61.194	ENSATEG00000002534	gfi1b	100	61.194	Anabas_testudineus
ENSLACG00000012207	GFI1B	100	64.497	ENSAPLG00000003373	GFI1B	100	64.497	Anas_platyrhynchos
ENSLACG00000012207	GFI1B	100	59.819	ENSACLG00000027053	gfi1b	100	59.819	Astatotilapia_calliptera
ENSLACG00000012207	GFI1B	100	60.237	ENSAMXG00000037544	GFI1B	100	60.237	Astyanax_mexicanus
ENSLACG00000012207	GFI1B	100	63.174	ENSCAPG00000010404	GFI1B	100	63.174	Cavia_aperea
ENSLACG00000012207	GFI1B	100	65.797	ENSCPBG00000021186	GFI1B	100	65.797	Chrysemys_picta_bellii
ENSLACG00000012207	GFI1B	100	58.929	ENSCSEG00000001315	gfi1b	100	58.929	Cynoglossus_semilaevis
ENSLACG00000012207	GFI1B	100	61.774	ENSCVAG00000017168	gfi1b	100	61.774	Cyprinodon_variegatus
ENSLACG00000012207	GFI1B	100	60.641	ENSDARG00000079947	gfi1b	99	75.620	Danio_rerio
ENSLACG00000012207	GFI1B	67	56.164	ENSEEUG00000012609	-	96	56.164	Erinaceus_europaeus
ENSLACG00000012207	GFI1B	100	59.249	ENSELUG00000016933	gfi1b	100	59.249	Esox_lucius
ENSLACG00000012207	GFI1B	100	61.370	ENSFALG00000001479	GFI1B	100	61.370	Ficedula_albicollis
ENSLACG00000012207	GFI1B	100	60.778	ENSFHEG00000015138	gfi1b	100	60.778	Fundulus_heteroclitus
ENSLACG00000012207	GFI1B	74	74.074	ENSGMOG00000019123	gfi1b	90	74.074	Gadus_morhua
ENSLACG00000012207	GFI1B	100	65.789	ENSGALG00000003478	GFI1B	100	65.789	Gallus_gallus
ENSLACG00000012207	GFI1B	72	74.576	ENSGAFG00000003059	gfi1b	99	74.576	Gambusia_affinis
ENSLACG00000012207	GFI1B	100	56.941	ENSGACG00000018134	gfi1b	100	56.941	Gasterosteus_aculeatus
ENSLACG00000012207	GFI1B	100	66.181	ENSGAGG00000021327	GFI1B	100	66.181	Gopherus_agassizii
ENSLACG00000012207	GFI1B	100	59.819	ENSHBUG00000005451	gfi1b	100	59.819	Haplochromis_burtoni
ENSLACG00000012207	GFI1B	100	59.467	ENSHCOG00000013713	gfi1b	100	59.467	Hippocampus_comes
ENSLACG00000012207	GFI1B	100	61.696	ENSIPUG00000012769	gfi1b	100	61.696	Ictalurus_punctatus
ENSLACG00000012207	GFI1B	99	55.707	ENSJJAG00000016355	Gfi1b	100	55.707	Jaculus_jaculus
ENSLACG00000012207	GFI1B	100	60.896	ENSKMAG00000016047	gfi1b	100	60.896	Kryptolebias_marmoratus
ENSLACG00000012207	GFI1B	100	60.909	ENSLBEG00000020297	gfi1b	99	60.909	Labrus_bergylta
ENSLACG00000012207	GFI1B	100	63.050	ENSLOCG00000005750	gfi1b	100	63.050	Lepisosteus_oculatus
ENSLACG00000012207	GFI1B	100	63.798	ENSLAFG00000022367	GFI1B	100	63.798	Loxodonta_africana
ENSLACG00000012207	GFI1B	100	60.778	ENSMAMG00000003040	gfi1b	100	60.778	Mastacembelus_armatus
ENSLACG00000012207	GFI1B	99	60.303	ENSMZEG00005015594	gfi1b	99	60.303	Maylandia_zebra
ENSLACG00000012207	GFI1B	100	65.789	ENSMGAG00000006129	GFI1B	100	65.789	Meleagris_gallopavo
ENSLACG00000012207	GFI1B	100	60.182	ENSMMOG00000011764	gfi1b	100	60.182	Mola_mola
ENSLACG00000012207	GFI1B	100	58.311	ENSMODG00000012600	GFI1B	100	58.311	Monodelphis_domestica
ENSLACG00000012207	GFI1B	100	59.281	ENSMALG00000004034	gfi1b	100	59.281	Monopterus_albus
ENSLACG00000012207	GFI1B	99	62.573	ENSNGAG00000003333	Gfi1b	100	62.573	Nannospalax_galili
ENSLACG00000012207	GFI1B	99	59.403	ENSNBRG00000012391	gfi1b	99	59.403	Neolamprologus_brichardi
ENSLACG00000012207	GFI1B	100	58.036	ENSONIG00000013011	gfi1b	94	84.916	Oreochromis_niloticus
ENSLACG00000012207	GFI1B	100	68.502	ENSOANG00000014723	GFI1B	100	68.502	Ornithorhynchus_anatinus
ENSLACG00000012207	GFI1B	100	48.503	ENSORLG00000014390	GFI1B	96	52.982	Oryzias_latipes
ENSLACG00000012207	GFI1B	100	59.941	ENSORLG00020003719	GFI1B	100	59.941	Oryzias_latipes_hni
ENSLACG00000012207	GFI1B	100	59.012	ENSORLG00015017142	gfi1b	100	59.012	Oryzias_latipes_hsok
ENSLACG00000012207	GFI1B	100	60.790	ENSOMEG00000015149	GFI1B	100	60.790	Oryzias_melastigma
ENSLACG00000012207	GFI1B	100	61.765	ENSOGAG00000008879	GFI1B	100	61.671	Otolemur_garnettii
ENSLACG00000012207	GFI1B	100	59.195	ENSPKIG00000007643	gfi1b	100	59.195	Paramormyrops_kingsleyae
ENSLACG00000012207	GFI1B	100	65.903	ENSPSIG00000012112	GFI1B	100	65.903	Pelodiscus_sinensis
ENSLACG00000012207	GFI1B	71	71.967	ENSPMGG00000006021	gfi1b	75	72.803	Periophthalmus_magnuspinnatus
ENSLACG00000012207	GFI1B	100	57.995	ENSPCIG00000019724	GFI1B	100	57.995	Phascolarctos_cinereus
ENSLACG00000012207	GFI1B	100	59.767	ENSPFOG00000003460	gfi1b	100	59.767	Poecilia_formosa
ENSLACG00000012207	GFI1B	100	60.174	ENSPLAG00000017181	GFI1B	100	60.174	Poecilia_latipinna
ENSLACG00000012207	GFI1B	100	61.243	ENSPLAG00000021960	GFI1B	100	61.243	Poecilia_latipinna
ENSLACG00000012207	GFI1B	100	60.947	ENSPMEG00000019220	gfi1b	100	60.947	Poecilia_mexicana
ENSLACG00000012207	GFI1B	100	60.947	ENSPMEG00000001556	GFI1B	100	60.947	Poecilia_mexicana
ENSLACG00000012207	GFI1B	100	61.538	ENSPREG00000021718	gfi1b	100	61.538	Poecilia_reticulata
ENSLACG00000012207	GFI1B	100	58.610	ENSPNYG00000018422	gfi1b	100	58.610	Pundamilia_nyererei
ENSLACG00000012207	GFI1B	100	61.111	ENSPNAG00000021118	gfi1b	100	61.111	Pygocentrus_nattereri
ENSLACG00000012207	GFI1B	100	53.175	ENSSHAG00000006462	GFI1B	100	53.175	Sarcophilus_harrisii
ENSLACG00000012207	GFI1B	98	51.890	ENSSFOG00015011566	gfi1b	90	51.890	Scleropages_formosus
ENSLACG00000012207	GFI1B	99	60.790	ENSSMAG00000015181	gfi1b	99	60.790	Scophthalmus_maximus
ENSLACG00000012207	GFI1B	100	60.714	ENSSDUG00000011604	gfi1b	100	60.714	Seriola_dumerili
ENSLACG00000012207	GFI1B	100	60.714	ENSSLDG00000013823	gfi1b	100	60.714	Seriola_lalandi_dorsalis
ENSLACG00000012207	GFI1B	100	53.824	ENSSPUG00000016039	GFI1B	100	53.824	Sphenodon_punctatus
ENSLACG00000012207	GFI1B	100	60.299	ENSSPAG00000022914	gfi1b	100	60.299	Stegastes_partitus
ENSLACG00000012207	GFI1B	51	96.491	ENSTGUG00000005282	-	100	96.491	Taeniopygia_guttata
ENSLACG00000012207	GFI1B	64	57.229	ENSTGUG00000015953	-	85	57.229	Taeniopygia_guttata
ENSLACG00000012207	GFI1B	100	58.529	ENSTRUG00000004525	gfi1b	100	58.529	Takifugu_rubripes
ENSLACG00000012207	GFI1B	100	58.806	ENSTNIG00000003834	gfi1b	100	58.806	Tetraodon_nigroviridis
ENSLACG00000012207	GFI1B	100	45.428	ENSTBEG00000014459	GFI1B	100	45.428	Tupaia_belangeri
ENSLACG00000012207	GFI1B	100	60.237	ENSXETG00000006263	gfi1b	100	61.310	Xenopus_tropicalis
ENSLACG00000012207	GFI1B	100	60.947	ENSXMAG00000027589	gfi1b	100	60.947	Xiphophorus_maculatus