EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012216 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1097 bases
Position: chrJH127784.1:691144-692240
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013876	zf-CCHC	PF00098.23	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000013973	-	1097	-	ENSLACP00000013876	307 (aa)	-	H3AW55

Gene Model

Click here to download ENSLACG00000012216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012216	-	81	46.988	ENSLACG00000003328	-	84	46.988
ENSLACG00000012216	-	86	48.864	ENSLACG00000022202	-	64	48.864
ENSLACG00000012216	-	80	49.398	ENSLACG00000002973	-	63	49.398
ENSLACG00000012216	-	98	66.777	ENSLACG00000012103	-	88	66.777
ENSLACG00000012216	-	91	62.278	ENSLACG00000004809	-	53	68.400
ENSLACG00000012216	-	92	47.687	ENSLACG00000003445	-	60	51.004
ENSLACG00000012216	-	64	81.726	ENSLACG00000000032	-	56	81.726
ENSLACG00000012216	-	65	85.427	ENSLACG00000022551	-	52	85.427
ENSLACG00000012216	-	74	70.614	ENSLACG00000002300	-	69	70.614
ENSLACG00000012216	-	89	69.963	ENSLACG00000002864	-	89	71.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012216	-	75	37.931	ENSG00000247315	ZCCHC3	58	37.931	Homo_sapiens
ENSLACG00000012216	-	70	39.726	ENSAMEG00000013999	ZCCHC3	71	39.726	Ailuropoda_melanoleuca
ENSLACG00000012216	-	70	39.726	ENSANAG00000013484	ZCCHC3	55	39.726	Aotus_nancymaae
ENSLACG00000012216	-	70	33.182	ENSACLG00000019767	-	53	33.182	Astatotilapia_calliptera
ENSLACG00000012216	-	70	31.818	ENSACLG00000019815	-	53	31.818	Astatotilapia_calliptera
ENSLACG00000012216	-	70	39.726	ENSBTAG00000002116	ZCCHC3	54	39.726	Bos_taurus
ENSLACG00000012216	-	70	39.726	ENSCJAG00000020839	ZCCHC3	54	39.726	Callithrix_jacchus
ENSLACG00000012216	-	70	39.726	ENSCAFG00000025206	ZCCHC3	92	35.821	Canis_familiaris
ENSLACG00000012216	-	70	39.726	ENSCAFG00020004076	ZCCHC3	54	39.726	Canis_lupus_dingo
ENSLACG00000012216	-	70	39.726	ENSCHIG00000009882	ZCCHC3	54	39.726	Capra_hircus
ENSLACG00000012216	-	70	39.726	ENSCPOG00000023974	ZCCHC3	56	39.726	Cavia_porcellus
ENSLACG00000012216	-	70	39.726	ENSCCAG00000016869	ZCCHC3	54	39.726	Cebus_capucinus
ENSLACG00000012216	-	70	39.726	ENSCATG00000022200	ZCCHC3	54	39.726	Cercocebus_atys
ENSLACG00000012216	-	70	39.726	ENSCLAG00000000269	ZCCHC3	55	39.726	Chinchilla_lanigera
ENSLACG00000012216	-	70	39.726	ENSCSAG00000018761	ZCCHC3	54	39.726	Chlorocebus_sabaeus
ENSLACG00000012216	-	70	39.726	ENSCANG00000010812	ZCCHC3	79	39.726	Colobus_angolensis_palliatus
ENSLACG00000012216	-	75	37.931	ENSCGRG00001009163	-	58	37.931	Cricetulus_griseus_chok1gshd
ENSLACG00000012216	-	70	39.726	ENSCGRG00001011895	-	60	39.726	Cricetulus_griseus_chok1gshd
ENSLACG00000012216	-	70	39.726	ENSCGRG00000008273	-	60	39.726	Cricetulus_griseus_crigri
ENSLACG00000012216	-	70	39.726	ENSDNOG00000047357	ZCCHC3	58	38.034	Dasypus_novemcinctus
ENSLACG00000012216	-	70	39.726	ENSEASG00005003629	ZCCHC3	57	38.095	Equus_asinus_asinus
ENSLACG00000012216	-	70	39.726	ENSECAG00000001035	ZCCHC3	57	38.095	Equus_caballus
ENSLACG00000012216	-	64	33.333	ENSELUG00000017799	-	64	33.333	Esox_lucius
ENSLACG00000012216	-	70	39.726	ENSFCAG00000026760	ZCCHC3	54	39.726	Felis_catus
ENSLACG00000012216	-	57	41.243	ENSGGOG00000044213	ZCCHC3	54	41.243	Gorilla_gorilla
ENSLACG00000012216	-	69	31.163	ENSHBUG00000005879	-	78	31.163	Haplochromis_burtoni
ENSLACG00000012216	-	70	39.726	ENSHGLG00000019351	ZCCHC3	55	39.726	Heterocephalus_glaber_female
ENSLACG00000012216	-	70	37.443	ENSHGLG00100009699	ZCCHC3	63	37.443	Heterocephalus_glaber_male
ENSLACG00000012216	-	73	32.328	ENSIPUG00000000506	-	61	31.915	Ictalurus_punctatus
ENSLACG00000012216	-	70	39.269	ENSJJAG00000020375	Zcchc3	54	39.726	Jaculus_jaculus
ENSLACG00000012216	-	52	32.716	ENSLOCG00000017503	-	90	32.716	Lepisosteus_oculatus
ENSLACG00000012216	-	52	35.802	ENSLOCG00000017639	-	90	35.802	Lepisosteus_oculatus
ENSLACG00000012216	-	53	33.133	ENSLOCG00000017974	-	84	33.133	Lepisosteus_oculatus
ENSLACG00000012216	-	50	34.194	ENSLOCG00000017328	-	91	34.194	Lepisosteus_oculatus
ENSLACG00000012216	-	51	31.447	ENSLOCG00000018075	-	81	31.447	Lepisosteus_oculatus
ENSLACG00000012216	-	74	31.760	ENSLOCG00000000227	-	73	31.760	Lepisosteus_oculatus
ENSLACG00000012216	-	50	33.121	ENSLOCG00000006695	-	90	33.121	Lepisosteus_oculatus
ENSLACG00000012216	-	57	37.594	ENSLOCG00000000632	-	92	37.594	Lepisosteus_oculatus
ENSLACG00000012216	-	52	35.185	ENSLOCG00000017670	-	90	35.185	Lepisosteus_oculatus
ENSLACG00000012216	-	53	34.545	ENSLOCG00000017303	-	87	34.545	Lepisosteus_oculatus
ENSLACG00000012216	-	70	39.726	ENSLAFG00000030593	ZCCHC3	81	39.726	Loxodonta_africana
ENSLACG00000012216	-	70	39.726	ENSMFAG00000044780	ZCCHC3	54	39.726	Macaca_fascicularis
ENSLACG00000012216	-	70	39.726	ENSMMUG00000038935	ZCCHC3	54	39.726	Macaca_mulatta
ENSLACG00000012216	-	70	39.726	ENSMNEG00000000405	ZCCHC3	54	39.726	Macaca_nemestrina
ENSLACG00000012216	-	69	32.093	ENSMZEG00005000211	-	54	32.093	Maylandia_zebra
ENSLACG00000012216	-	70	30.275	ENSMZEG00005000499	-	62	30.275	Maylandia_zebra
ENSLACG00000012216	-	72	31.111	ENSMZEG00005025871	-	54	31.111	Maylandia_zebra
ENSLACG00000012216	-	51	34.375	ENSMZEG00005028553	-	77	34.375	Maylandia_zebra
ENSLACG00000012216	-	69	31.481	ENSMZEG00005021211	-	55	31.481	Maylandia_zebra
ENSLACG00000012216	-	72	31.111	ENSMZEG00005025868	-	53	31.390	Maylandia_zebra
ENSLACG00000012216	-	72	31.111	ENSMZEG00005025869	-	54	31.111	Maylandia_zebra
ENSLACG00000012216	-	63	32.653	ENSMZEG00005008237	-	55	32.653	Maylandia_zebra
ENSLACG00000012216	-	70	33.182	ENSMZEG00005028125	-	52	33.182	Maylandia_zebra
ENSLACG00000012216	-	70	39.726	ENSMICG00000031267	ZCCHC3	55	39.726	Microcebus_murinus
ENSLACG00000012216	-	70	39.269	ENSMOCG00000002870	Zcchc3	55	39.269	Microtus_ochrogaster
ENSLACG00000012216	-	69	30.556	ENSMMOG00000004516	-	65	30.556	Mola_mola
ENSLACG00000012216	-	70	39.726	MGP_CAROLIEiJ_G0024454	Zcchc3	55	39.726	Mus_caroli
ENSLACG00000012216	-	91	33.569	ENSMUSG00000074682	Zcchc3	55	39.726	Mus_musculus
ENSLACG00000012216	-	70	39.726	MGP_PahariEiJ_G0025898	Zcchc3	55	39.726	Mus_pahari
ENSLACG00000012216	-	91	33.569	MGP_SPRETEiJ_G0025375	Zcchc3	55	39.726	Mus_spretus
ENSLACG00000012216	-	70	39.269	ENSNGAG00000006074	Zcchc3	56	39.269	Nannospalax_galili
ENSLACG00000012216	-	70	31.364	ENSNBRG00000024091	-	62	31.364	Neolamprologus_brichardi
ENSLACG00000012216	-	50	33.333	ENSNBRG00000024092	-	82	33.333	Neolamprologus_brichardi
ENSLACG00000012216	-	70	36.986	ENSNLEG00000009533	ZCCHC3	54	36.986	Nomascus_leucogenys
ENSLACG00000012216	-	70	40.183	ENSOPRG00000005081	ZCCHC3	57	38.197	Ochotona_princeps
ENSLACG00000012216	-	96	33.003	ENSODEG00000010730	ZCCHC3	54	39.726	Octodon_degus
ENSLACG00000012216	-	74	39.130	ENSOCUG00000017024	ZCCHC3	62	38.889	Oryctolagus_cuniculus
ENSLACG00000012216	-	70	39.726	ENSOGAG00000025208	ZCCHC3	54	39.726	Otolemur_garnettii
ENSLACG00000012216	-	70	39.726	ENSOARG00000019161	ZCCHC3	76	39.726	Ovis_aries
ENSLACG00000012216	-	70	39.726	ENSPPAG00000010453	-	83	39.726	Pan_paniscus
ENSLACG00000012216	-	70	39.726	ENSPPRG00000014724	ZCCHC3	54	39.726	Panthera_pardus
ENSLACG00000012216	-	70	36.073	ENSPTIG00000009393	ZCCHC3	88	36.073	Panthera_tigris_altaica
ENSLACG00000012216	-	70	39.726	ENSPTRG00000047645	ZCCHC3	54	39.726	Pan_troglodytes
ENSLACG00000012216	-	70	39.726	ENSPANG00000013450	ZCCHC3	54	39.726	Papio_anubis
ENSLACG00000012216	-	70	39.726	ENSPEMG00000009059	Zcchc3	55	39.726	Peromyscus_maniculatus_bairdii
ENSLACG00000012216	-	64	38.500	ENSPCAG00000008034	ZCCHC3	55	38.500	Procavia_capensis
ENSLACG00000012216	-	70	39.726	ENSPCOG00000012289	ZCCHC3	65	35.907	Propithecus_coquereli
ENSLACG00000012216	-	70	39.726	ENSPVAG00000000182	ZCCHC3	54	39.726	Pteropus_vampyrus
ENSLACG00000012216	-	72	31.111	ENSPNYG00000003800	-	55	31.111	Pundamilia_nyererei
ENSLACG00000012216	-	85	35.688	ENSRNOG00000007520	Zcchc3	67	35.688	Rattus_norvegicus
ENSLACG00000012216	-	70	39.726	ENSRBIG00000029757	ZCCHC3	54	39.726	Rhinopithecus_bieti
ENSLACG00000012216	-	70	39.726	ENSRROG00000005210	ZCCHC3	54	39.726	Rhinopithecus_roxellana
ENSLACG00000012216	-	50	30.625	ENSSFOG00015017573	-	82	30.625	Scleropages_formosus
ENSLACG00000012216	-	70	39.726	ENSSSCG00000007211	ZCCHC3	54	39.726	Sus_scrofa
ENSLACG00000012216	-	70	39.726	ENSTTRG00000008511	ZCCHC3	54	39.726	Tursiops_truncatus
ENSLACG00000012216	-	70	39.726	ENSUAMG00000023407	ZCCHC3	55	39.726	Ursus_americanus
ENSLACG00000012216	-	66	39.216	ENSVPAG00000011267	-	83	39.216	Vicugna_pacos
ENSLACG00000012216	-	55	40.828	ENSXETG00000032402	-	88	40.828	Xenopus_tropicalis
ENSLACG00000012216	-	54	43.713	ENSXETG00000033566	-	88	43.713	Xenopus_tropicalis
ENSLACG00000012216	-	54	43.713	ENSXETG00000033661	-	88	43.713	Xenopus_tropicalis
ENSLACG00000012216	-	54	43.713	ENSXETG00000033553	-	88	43.713	Xenopus_tropicalis
ENSLACG00000012216	-	54	37.725	ENSXETG00000031539	-	88	37.725	Xenopus_tropicalis
ENSLACG00000012216	-	55	40.828	ENSXETG00000031282	-	89	40.828	Xenopus_tropicalis
ENSLACG00000012216	-	71	37.443	ENSXETG00000033341	-	92	38.571	Xenopus_tropicalis
ENSLACG00000012216	-	54	43.713	ENSXETG00000034120	-	88	43.713	Xenopus_tropicalis
ENSLACG00000012216	-	54	43.114	ENSXETG00000030911	-	88	43.114	Xenopus_tropicalis
ENSLACG00000012216	-	55	40.828	ENSXETG00000032297	-	88	40.828	Xenopus_tropicalis
ENSLACG00000012216	-	71	36.986	ENSXETG00000005590	-	73	36.986	Xenopus_tropicalis
ENSLACG00000012216	-	54	44.311	ENSXETG00000034004	-	88	44.311	Xenopus_tropicalis
ENSLACG00000012216	-	63	31.500	ENSXCOG00000010666	-	52	31.500	Xiphophorus_couchianus