EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012295 (Gene tree)
Gene ID: 102365074
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 43963 bases
Position: chrJH127331.1:699388-743350
Accession: 102365074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000013963	GTP_EFTU	PF00009.27	2.9e-63	1	1
ENSLACP00000013963	GTP_EFTU_D2	PF03144.25	3.2e-14	1	1
ENSLACP00000013963	EFG_IV	PF03764.18	7.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014062	GFM1-201	4668	XM_006002161	ENSLACP00000013963	740 (aa)	XP_006002223	H3AWE2

Gene Model

Click here to download ENSLACG00000012295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012295	GFM1	77	36.913	ENSLACG00000004710	-	75	36.913
ENSLACG00000012295	GFM1	52	31.100	ENSLACG00000007692	GUF1	54	31.100
ENSLACG00000012295	GFM1	93	34.016	ENSLACG00000004622	GFM2	90	33.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012295	GFM1	99	80.548	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSLACG00000012295	GFM1	92	79.215	ENSAPOG00000016489	gfm1	98	79.215	Acanthochromis_polyacanthus
ENSLACG00000012295	GFM1	97	81.476	ENSAMEG00000013542	GFM1	95	81.476	Ailuropoda_melanoleuca
ENSLACG00000012295	GFM1	98	76.891	ENSACIG00000014465	gfm1	94	76.891	Amphilophus_citrinellus
ENSLACG00000012295	GFM1	99	79.273	ENSAOCG00000006023	gfm1	99	79.273	Amphiprion_ocellaris
ENSLACG00000012295	GFM1	99	79.004	ENSAPEG00000024499	gfm1	99	80.614	Amphiprion_percula
ENSLACG00000012295	GFM1	100	80.214	ENSATEG00000013789	gfm1	100	80.214	Anabas_testudineus
ENSLACG00000012295	GFM1	98	81.906	ENSAPLG00000005022	GFM1	99	81.906	Anas_platyrhynchos
ENSLACG00000012295	GFM1	99	82.051	ENSACAG00000006829	GFM1	100	82.051	Anolis_carolinensis
ENSLACG00000012295	GFM1	100	78.828	ENSANAG00000035983	GFM1	100	78.828	Aotus_nancymaae
ENSLACG00000012295	GFM1	100	80.214	ENSACLG00000016586	gfm1	100	80.214	Astatotilapia_calliptera
ENSLACG00000012295	GFM1	100	81.427	ENSAMXG00000013435	gfm1	97	82.483	Astyanax_mexicanus
ENSLACG00000012295	GFM1	99	80.933	ENSBTAG00000027795	GFM1	96	80.933	Bos_taurus
ENSLACG00000012295	GFM1	95	55.635	WBGene00009246	gfm-1	95	55.478	Caenorhabditis_elegans
ENSLACG00000012295	GFM1	100	79.095	ENSCJAG00000000363	GFM1	100	79.095	Callithrix_jacchus
ENSLACG00000012295	GFM1	99	81.096	ENSCAFG00000009006	GFM1	100	81.953	Canis_familiaris
ENSLACG00000012295	GFM1	99	80.959	ENSCAFG00020005878	GFM1	99	81.405	Canis_lupus_dingo
ENSLACG00000012295	GFM1	99	80.933	ENSCHIG00000015220	GFM1	96	80.933	Capra_hircus
ENSLACG00000012295	GFM1	100	78.884	ENSTSYG00000002013	GFM1	100	78.884	Carlito_syrichta
ENSLACG00000012295	GFM1	97	71.884	ENSCAPG00000005699	GFM1	97	71.884	Cavia_aperea
ENSLACG00000012295	GFM1	97	82.476	ENSCPOG00000001194	GFM1	95	82.476	Cavia_porcellus
ENSLACG00000012295	GFM1	100	79.095	ENSCCAG00000025561	GFM1	100	79.095	Cebus_capucinus
ENSLACG00000012295	GFM1	100	78.828	ENSCATG00000037622	GFM1	100	78.828	Cercocebus_atys
ENSLACG00000012295	GFM1	97	81.919	ENSCLAG00000002503	GFM1	95	81.919	Chinchilla_lanigera
ENSLACG00000012295	GFM1	100	79.095	ENSCSAG00000012162	GFM1	100	79.095	Chlorocebus_sabaeus
ENSLACG00000012295	GFM1	100	70.955	ENSCHOG00000004867	GFM1	100	70.955	Choloepus_hoffmanni
ENSLACG00000012295	GFM1	100	79.652	ENSCPBG00000018367	GFM1	99	79.652	Chrysemys_picta_bellii
ENSLACG00000012295	GFM1	98	56.528	ENSCING00000011960	-	96	56.528	Ciona_intestinalis
ENSLACG00000012295	GFM1	95	59.375	ENSCSAVG00000008514	-	99	58.405	Ciona_savignyi
ENSLACG00000012295	GFM1	99	80.000	ENSCANG00000031714	GFM1	100	78.961	Colobus_angolensis_palliatus
ENSLACG00000012295	GFM1	100	79.233	ENSCGRG00001022095	GFM1	100	79.233	Cricetulus_griseus_chok1gshd
ENSLACG00000012295	GFM1	100	79.233	ENSCGRG00000012043	GFM1	100	79.233	Cricetulus_griseus_crigri
ENSLACG00000012295	GFM1	98	77.732	ENSCSEG00000017088	gfm1	99	77.732	Cynoglossus_semilaevis
ENSLACG00000012295	GFM1	99	81.965	ENSCVAG00000004126	gfm1	99	82.419	Cyprinodon_variegatus
ENSLACG00000012295	GFM1	100	79.060	ENSDARG00000063624	gfm1	100	79.060	Danio_rerio
ENSLACG00000012295	GFM1	55	79.218	ENSDNOG00000016385	-	100	79.218	Dasypus_novemcinctus
ENSLACG00000012295	GFM1	100	77.527	ENSDORG00000014165	Gfm1	100	77.527	Dipodomys_ordii
ENSLACG00000012295	GFM1	99	65.400	FBgn0263133	mEFG1	98	65.400	Drosophila_melanogaster
ENSLACG00000012295	GFM1	99	73.361	ENSETEG00000019197	GFM1	100	71.958	Echinops_telfairi
ENSLACG00000012295	GFM1	91	63.947	ENSEBUG00000012794	gfm1	99	63.947	Eptatretus_burgeri
ENSLACG00000012295	GFM1	97	60.833	ENSEEUG00000000429	GFM1	99	60.833	Erinaceus_europaeus
ENSLACG00000012295	GFM1	100	80.749	ENSELUG00000014728	gfm1	100	80.749	Esox_lucius
ENSLACG00000012295	GFM1	99	80.274	ENSFCAG00000013291	GFM1	100	78.912	Felis_catus
ENSLACG00000012295	GFM1	91	81.630	ENSFALG00000007619	GFM1	100	81.630	Ficedula_albicollis
ENSLACG00000012295	GFM1	97	81.831	ENSFDAG00000016559	GFM1	96	81.831	Fukomys_damarensis
ENSLACG00000012295	GFM1	100	80.615	ENSFHEG00000006091	gfm1	100	80.615	Fundulus_heteroclitus
ENSLACG00000012295	GFM1	98	80.605	ENSGMOG00000010161	gfm1	100	80.605	Gadus_morhua
ENSLACG00000012295	GFM1	100	80.811	ENSGALG00000009634	GFM1	99	80.811	Gallus_gallus
ENSLACG00000012295	GFM1	100	81.818	ENSGAFG00000012527	gfm1	100	81.818	Gambusia_affinis
ENSLACG00000012295	GFM1	99	79.947	ENSGACG00000009864	gfm1	99	79.947	Gasterosteus_aculeatus
ENSLACG00000012295	GFM1	99	80.548	ENSGGOG00000003085	GFM1	100	79.494	Gorilla_gorilla
ENSLACG00000012295	GFM1	100	80.348	ENSHBUG00000002120	gfm1	100	80.348	Haplochromis_burtoni
ENSLACG00000012295	GFM1	99	80.274	ENSHGLG00000016855	GFM1	96	80.274	Heterocephalus_glaber_female
ENSLACG00000012295	GFM1	99	80.274	ENSHGLG00100013049	GFM1	96	80.274	Heterocephalus_glaber_male
ENSLACG00000012295	GFM1	99	80.619	ENSHCOG00000007638	gfm1	98	82.047	Hippocampus_comes
ENSLACG00000012295	GFM1	98	82.573	ENSIPUG00000005873	gfm1	100	80.882	Ictalurus_punctatus
ENSLACG00000012295	GFM1	100	77.987	ENSSTOG00000010150	GFM1	100	77.987	Ictidomys_tridecemlineatus
ENSLACG00000012295	GFM1	99	78.571	ENSJJAG00000016447	Gfm1	98	78.571	Jaculus_jaculus
ENSLACG00000012295	GFM1	99	80.384	ENSKMAG00000020768	gfm1	100	78.877	Kryptolebias_marmoratus
ENSLACG00000012295	GFM1	95	81.027	ENSLBEG00000021315	gfm1	100	81.027	Labrus_bergylta
ENSLACG00000012295	GFM1	98	78.718	ENSLOCG00000003778	gfm1	100	78.718	Lepisosteus_oculatus
ENSLACG00000012295	GFM1	98	79.670	ENSLAFG00000010945	GFM1	99	78.297	Loxodonta_africana
ENSLACG00000012295	GFM1	99	80.137	ENSMFAG00000035731	GFM1	97	80.137	Macaca_fascicularis
ENSLACG00000012295	GFM1	99	80.137	ENSMMUG00000004961	GFM1	97	80.137	Macaca_mulatta
ENSLACG00000012295	GFM1	100	78.828	ENSMNEG00000033245	GFM1	100	78.828	Macaca_nemestrina
ENSLACG00000012295	GFM1	100	77.315	ENSMLEG00000030908	GFM1	100	77.315	Mandrillus_leucophaeus
ENSLACG00000012295	GFM1	100	80.214	ENSMAMG00000011760	gfm1	100	80.214	Mastacembelus_armatus
ENSLACG00000012295	GFM1	100	80.348	ENSMZEG00005016639	gfm1	100	80.348	Maylandia_zebra
ENSLACG00000012295	GFM1	98	81.994	ENSMGAG00000010641	GFM1	97	81.994	Meleagris_gallopavo
ENSLACG00000012295	GFM1	100	79.365	ENSMAUG00000000611	Gfm1	100	79.365	Mesocricetus_auratus
ENSLACG00000012295	GFM1	99	80.274	ENSMICG00000049086	GFM1	96	80.274	Microcebus_murinus
ENSLACG00000012295	GFM1	100	79.101	ENSMOCG00000000465	Gfm1	100	79.101	Microtus_ochrogaster
ENSLACG00000012295	GFM1	99	82.853	ENSMMOG00000012538	gfm1	98	82.853	Mola_mola
ENSLACG00000012295	GFM1	99	78.552	ENSMODG00000015673	GFM1	98	78.552	Monodelphis_domestica
ENSLACG00000012295	GFM1	97	81.032	ENSMALG00000012508	gfm1	95	81.032	Monopterus_albus
ENSLACG00000012295	GFM1	100	79.627	MGP_CAROLIEiJ_G0025052	Gfm1	100	79.627	Mus_caroli
ENSLACG00000012295	GFM1	100	79.494	ENSMUSG00000027774	Gfm1	100	79.494	Mus_musculus
ENSLACG00000012295	GFM1	100	79.228	MGP_PahariEiJ_G0026495	Gfm1	100	79.228	Mus_pahari
ENSLACG00000012295	GFM1	100	79.494	MGP_SPRETEiJ_G0025994	Gfm1	100	79.494	Mus_spretus
ENSLACG00000012295	GFM1	99	80.411	ENSMPUG00000002859	GFM1	96	80.411	Mustela_putorius_furo
ENSLACG00000012295	GFM1	99	80.685	ENSMLUG00000000452	GFM1	96	80.685	Myotis_lucifugus
ENSLACG00000012295	GFM1	100	79.467	ENSNGAG00000012375	Gfm1	100	79.467	Nannospalax_galili
ENSLACG00000012295	GFM1	98	82.573	ENSNBRG00000004631	gfm1	99	82.573	Neolamprologus_brichardi
ENSLACG00000012295	GFM1	99	80.411	ENSNLEG00000004176	GFM1	100	79.361	Nomascus_leucogenys
ENSLACG00000012295	GFM1	92	71.784	ENSMEUG00000007784	GFM1	100	71.784	Notamacropus_eugenii
ENSLACG00000012295	GFM1	100	78.677	ENSOPRG00000009860	GFM1	100	78.677	Ochotona_princeps
ENSLACG00000012295	GFM1	99	81.370	ENSODEG00000004316	GFM1	96	81.370	Octodon_degus
ENSLACG00000012295	GFM1	100	80.214	ENSONIG00000003772	gfm1	100	80.214	Oreochromis_niloticus
ENSLACG00000012295	GFM1	99	80.432	ENSOCUG00000013561	GFM1	100	79.708	Oryctolagus_cuniculus
ENSLACG00000012295	GFM1	96	81.356	ENSORLG00000006487	gfm1	100	81.356	Oryzias_latipes
ENSLACG00000012295	GFM1	100	79.011	ENSORLG00020003362	gfm1	100	79.011	Oryzias_latipes_hni
ENSLACG00000012295	GFM1	99	80.274	ENSORLG00015005829	gfm1	98	80.274	Oryzias_latipes_hsok
ENSLACG00000012295	GFM1	100	79.947	ENSOMEG00000012894	gfm1	100	79.947	Oryzias_melastigma
ENSLACG00000012295	GFM1	99	80.137	ENSOGAG00000008298	GFM1	96	80.137	Otolemur_garnettii
ENSLACG00000012295	GFM1	97	80.999	ENSOARG00000002409	GFM1	99	80.999	Ovis_aries
ENSLACG00000012295	GFM1	99	80.548	ENSPPAG00000033881	GFM1	100	79.494	Pan_paniscus
ENSLACG00000012295	GFM1	99	80.274	ENSPPRG00000009281	GFM1	100	78.912	Panthera_pardus
ENSLACG00000012295	GFM1	99	80.137	ENSPTIG00000012416	GFM1	100	78.780	Panthera_tigris_altaica
ENSLACG00000012295	GFM1	99	80.548	ENSPTRG00000015570	GFM1	100	79.494	Pan_troglodytes
ENSLACG00000012295	GFM1	100	79.095	ENSPANG00000016512	GFM1	100	79.095	Papio_anubis
ENSLACG00000012295	GFM1	100	80.882	ENSPKIG00000004876	gfm1	100	80.882	Paramormyrops_kingsleyae
ENSLACG00000012295	GFM1	100	81.928	ENSPSIG00000012567	GFM1	99	81.928	Pelodiscus_sinensis
ENSLACG00000012295	GFM1	98	79.172	ENSPMGG00000014068	gfm1	100	79.172	Periophthalmus_magnuspinnatus
ENSLACG00000012295	GFM1	100	78.836	ENSPEMG00000008942	Gfm1	100	78.836	Peromyscus_maniculatus_bairdii
ENSLACG00000012295	GFM1	87	76.361	ENSPCIG00000020195	GFM1	98	77.760	Phascolarctos_cinereus
ENSLACG00000012295	GFM1	100	82.353	ENSPFOG00000011022	gfm1	100	82.353	Poecilia_formosa
ENSLACG00000012295	GFM1	98	83.929	ENSPLAG00000019585	gfm1	100	81.601	Poecilia_latipinna
ENSLACG00000012295	GFM1	100	82.219	ENSPMEG00000012376	gfm1	100	82.219	Poecilia_mexicana
ENSLACG00000012295	GFM1	100	81.818	ENSPREG00000001332	gfm1	95	81.818	Poecilia_reticulata
ENSLACG00000012295	GFM1	99	80.411	ENSPPYG00000014244	GFM1	100	79.361	Pongo_abelii
ENSLACG00000012295	GFM1	95	80.512	ENSPCAG00000008934	GFM1	100	80.512	Procavia_capensis
ENSLACG00000012295	GFM1	99	80.274	ENSPCOG00000022259	GFM1	96	80.274	Propithecus_coquereli
ENSLACG00000012295	GFM1	99	79.589	ENSPVAG00000013605	GFM1	96	79.589	Pteropus_vampyrus
ENSLACG00000012295	GFM1	99	81.583	ENSPNYG00000006037	gfm1	99	81.583	Pundamilia_nyererei
ENSLACG00000012295	GFM1	100	81.183	ENSPNAG00000001237	gfm1	100	81.183	Pygocentrus_nattereri
ENSLACG00000012295	GFM1	100	78.968	ENSRNOG00000012873	Gfm1	100	78.968	Rattus_norvegicus
ENSLACG00000012295	GFM1	99	80.000	ENSRBIG00000031363	GFM1	100	78.961	Rhinopithecus_bieti
ENSLACG00000012295	GFM1	99	80.137	ENSRROG00000031081	GFM1	100	79.095	Rhinopithecus_roxellana
ENSLACG00000012295	GFM1	93	57.061	YLR069C	-	90	57.061	Saccharomyces_cerevisiae
ENSLACG00000012295	GFM1	100	79.228	ENSSBOG00000023252	GFM1	100	79.228	Saimiri_boliviensis_boliviensis
ENSLACG00000012295	GFM1	98	80.498	ENSSHAG00000017772	GFM1	97	80.498	Sarcophilus_harrisii
ENSLACG00000012295	GFM1	100	80.774	ENSSFOG00015003117	gfm1	99	82.434	Scleropages_formosus
ENSLACG00000012295	GFM1	98	81.189	ENSSMAG00000013221	gfm1	100	79.144	Scophthalmus_maximus
ENSLACG00000012295	GFM1	100	80.348	ENSSDUG00000018665	gfm1	100	80.348	Seriola_dumerili
ENSLACG00000012295	GFM1	100	80.481	ENSSLDG00000020606	gfm1	100	80.481	Seriola_lalandi_dorsalis
ENSLACG00000012295	GFM1	99	79.161	ENSSPUG00000018686	GFM1	100	79.161	Sphenodon_punctatus
ENSLACG00000012295	GFM1	100	80.080	ENSSPAG00000008800	gfm1	100	80.080	Stegastes_partitus
ENSLACG00000012295	GFM1	99	80.384	ENSSSCG00000025651	GFM1	96	80.384	Sus_scrofa
ENSLACG00000012295	GFM1	100	80.481	ENSTRUG00000009244	gfm1	100	80.481	Takifugu_rubripes
ENSLACG00000012295	GFM1	100	80.882	ENSTNIG00000007729	gfm1	100	80.882	Tetraodon_nigroviridis
ENSLACG00000012295	GFM1	91	73.185	ENSTBEG00000017404	GFM1	89	73.185	Tupaia_belangeri
ENSLACG00000012295	GFM1	99	80.301	ENSTTRG00000001735	GFM1	96	80.301	Tursiops_truncatus
ENSLACG00000012295	GFM1	99	80.548	ENSUAMG00000026381	GFM1	100	79.045	Ursus_americanus
ENSLACG00000012295	GFM1	99	80.548	ENSUMAG00000011268	GFM1	100	79.045	Ursus_maritimus
ENSLACG00000012295	GFM1	99	76.818	ENSVPAG00000009444	GFM1	96	76.818	Vicugna_pacos
ENSLACG00000012295	GFM1	99	81.122	ENSVVUG00000020091	GFM1	100	82.101	Vulpes_vulpes
ENSLACG00000012295	GFM1	100	80.769	ENSXETG00000032551	GFM1	100	80.769	Xenopus_tropicalis
ENSLACG00000012295	GFM1	51	81.600	ENSXCOG00000012590	gfm1	86	81.600	Xiphophorus_couchianus
ENSLACG00000012295	GFM1	100	81.551	ENSXMAG00000000261	gfm1	100	81.551	Xiphophorus_maculatus