EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLACG00000012318 (Gene tree)
Gene ID
102353226
Gene Symbol
U2SURP
Alias
SR140|fSAPa
Full Name
U2 snRNP associated SURP domain containing
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
50816 bases
Position
chrJH127415.1:702196-753011
Accession
102353226
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000013991cwf21PF08312.122.1e-1011
ENSLACP00000013991RRM_1PF00076.223.2e-1511
ENSLACP00000013991SurpPF01805.203.9e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000014090U2SURP-2015109XM_006002786ENSLACP00000013991936 (aa)XP_006002848H3AWH0
Gene Model
Click here to download ENSLACG00000012318's gene model file
Pathways
Pathway IDPathway NameSource
lcm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012318's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLACG00000012318U2SURP9362.186ENSLACG00000008434zgc:1630989861.163
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000012318U2SURP9988.639ENSG00000163714U2SURP9088.614Homo_sapiens
ENSLACG00000012318U2SURP9470.801ENSAPOG00000011345u2surp9671.967Acanthochromis_polyacanthus
ENSLACG00000012318U2SURP9551.982ENSAPOG00000005569zgc:1630989650.759Acanthochromis_polyacanthus
ENSLACG00000012318U2SURP9988.639ENSAMEG00000012757U2SURP9088.614Ailuropoda_melanoleuca
ENSLACG00000012318U2SURP9472.013ENSACIG00000018537u2surp9772.737Amphilophus_citrinellus
ENSLACG00000012318U2SURP9645.733ENSACIG00000011968zgc:1630987150.546Amphilophus_citrinellus
ENSLACG00000012318U2SURP9471.318ENSAOCG00000003589u2surp9572.363Amphiprion_ocellaris
ENSLACG00000012318U2SURP9652.845ENSAOCG00000008482zgc:1630988655.006Amphiprion_ocellaris
ENSLACG00000012318U2SURP9652.845ENSAPEG00000001348zgc:1630988655.006Amphiprion_percula
ENSLACG00000012318U2SURP9471.982ENSAPEG00000016652u2surp9971.339Amphiprion_percula
ENSLACG00000012318U2SURP8253.503ENSATEG00000016576zgc:1630988753.121Anabas_testudineus
ENSLACG00000012318U2SURP9472.991ENSATEG00000006321u2surp9973.673Anabas_testudineus
ENSLACG00000012318U2SURP9989.056ENSAPLG00000002348U2SURP9789.056Anas_platyrhynchos
ENSLACG00000012318U2SURP9987.794ENSACAG00000009512U2SURP8988.116Anolis_carolinensis
ENSLACG00000012318U2SURP9988.639ENSANAG00000035774U2SURP9687.957Aotus_nancymaae
ENSLACG00000012318U2SURP9751.304ENSACLG00000016647zgc:1630988849.936Astatotilapia_calliptera
ENSLACG00000012318U2SURP9472.155ENSACLG00000027507u2surp9672.363Astatotilapia_calliptera
ENSLACG00000012318U2SURP8752.651ENSAMXG00000005081zgc:1630988753.875Astyanax_mexicanus
ENSLACG00000012318U2SURP8575.956ENSAMXG00000006189u2surp8576.942Astyanax_mexicanus
ENSLACG00000012318U2SURP7935.329WBGene00015581C07H6.47534.014Caenorhabditis_elegans
ENSLACG00000012318U2SURP9988.734ENSCJAG00000001639U2SURP9088.710Callithrix_jacchus
ENSLACG00000012318U2SURP9988.734ENSCAFG00000007973U2SURP9088.710Canis_familiaris
ENSLACG00000012318U2SURP9988.639ENSCAFG00020010497U2SURP9288.614Canis_lupus_dingo
ENSLACG00000012318U2SURP9988.746ENSCHIG00000023892U2SURP9088.722Capra_hircus
ENSLACG00000012318U2SURP9988.639ENSTSYG00000008889U2SURP9488.614Carlito_syrichta
ENSLACG00000012318U2SURP8686.560ENSCAPG00000016009U2SURP9286.032Cavia_aperea
ENSLACG00000012318U2SURP8689.604ENSCPOG00000011656U2SURP9289.299Cavia_porcellus
ENSLACG00000012318U2SURP9980.538ENSCCAG00000032530U2SURP8087.730Cebus_capucinus
ENSLACG00000012318U2SURP9988.639ENSCATG00000039024U2SURP9688.614Cercocebus_atys
ENSLACG00000012318U2SURP9988.639ENSCLAG00000001331-9488.614Chinchilla_lanigera
ENSLACG00000012318U2SURP8770.000ENSCLAG00000011055-9460.879Chinchilla_lanigera
ENSLACG00000012318U2SURP9988.627ENSCSAG00000011321U2SURP9088.602Chlorocebus_sabaeus
ENSLACG00000012318U2SURP7390.027ENSCHOG00000001300U2SURP6790.027Choloepus_hoffmanni
ENSLACG00000012318U2SURP9988.746ENSCPBG00000008969U2SURP9689.068Chrysemys_picta_bellii
ENSLACG00000012318U2SURP9051.839ENSCING00000018030-8852.768Ciona_intestinalis
ENSLACG00000012318U2SURP9150.799ENSCSAVG00000009039-9750.575Ciona_savignyi
ENSLACG00000012318U2SURP9988.639ENSCANG00000032307U2SURP9688.614Colobus_angolensis_palliatus
ENSLACG00000012318U2SURP9988.412ENSCGRG00001019402U2surp9488.292Cricetulus_griseus_chok1gshd
ENSLACG00000012318U2SURP8888.889ENSCGRG00000014315U2surp9488.889Cricetulus_griseus_crigri
ENSLACG00000012318U2SURP9969.620ENSCSEG00000015150u2surp9772.648Cynoglossus_semilaevis
ENSLACG00000012318U2SURP9950.800ENSCSEG00000020119zgc:1630989545.987Cynoglossus_semilaevis
ENSLACG00000012318U2SURP9472.303ENSCVAG00000002961u2surp9973.333Cyprinodon_variegatus
ENSLACG00000012318U2SURP9674.176ENSDARG00000061490u2surp9774.393Danio_rerio
ENSLACG00000012318U2SURP9953.862ENSDARG00000078911zgc:1630989360.484Danio_rerio
ENSLACG00000012318U2SURP9988.342ENSDNOG00000006427U2SURP9087.674Dasypus_novemcinctus
ENSLACG00000012318U2SURP8547.288FBgn0034572CG93468347.506Drosophila_melanogaster
ENSLACG00000012318U2SURP8282.851ENSETEG00000000149U2SURP7982.708Echinops_telfairi
ENSLACG00000012318U2SURP6454.066ENSEBUG00000003543u2surp7455.502Eptatretus_burgeri
ENSLACG00000012318U2SURP9988.639ENSEASG00005000213U2SURP9088.614Equus_asinus_asinus
ENSLACG00000012318U2SURP9988.746ENSECAG00000022460U2SURP9188.562Equus_caballus
ENSLACG00000012318U2SURP8888.333ENSEEUG00000013553U2SURP7788.889Erinaceus_europaeus
ENSLACG00000012318U2SURP9971.125ENSELUG00000002150u2surp9670.487Esox_lucius
ENSLACG00000012318U2SURP9753.821ENSELUG00000017966zgc:1630988358.142Esox_lucius
ENSLACG00000012318U2SURP9988.734ENSFCAG00000012186U2SURP9088.710Felis_catus
ENSLACG00000012318U2SURP9988.055ENSFALG00000007070U2SURP9487.844Ficedula_albicollis
ENSLACG00000012318U2SURP9988.639ENSFDAG00000013365U2SURP9488.614Fukomys_damarensis
ENSLACG00000012318U2SURP9071.595ENSFHEG00000016966u2surp9671.654Fundulus_heteroclitus
ENSLACG00000012318U2SURP9653.456ENSFHEG00000014263zgc:1630988550.701Fundulus_heteroclitus
ENSLACG00000012318U2SURP7552.675ENSGMOG00000000935zgc:1630989152.990Gadus_morhua
ENSLACG00000012318U2SURP9668.172ENSGMOG00000002641u2surp9469.345Gadus_morhua
ENSLACG00000012318U2SURP9989.343ENSGALG00000002612U2SURP8888.913Gallus_gallus
ENSLACG00000012318U2SURP9570.796ENSGAFG00000004001u2surp9771.350Gambusia_affinis
ENSLACG00000012318U2SURP9770.815ENSGACG00000003763u2surp9470.825Gasterosteus_aculeatus
ENSLACG00000012318U2SURP9947.744ENSGACG00000020709zgc:1630988350.189Gasterosteus_aculeatus
ENSLACG00000012318U2SURP9988.412ENSGAGG00000010747U2SURP9988.734Gopherus_agassizii
ENSLACG00000012318U2SURP9988.639ENSGGOG00000005563U2SURP9685.549Gorilla_gorilla
ENSLACG00000012318U2SURP9651.581ENSHBUG00000022716zgc:1630988954.580Haplochromis_burtoni
ENSLACG00000012318U2SURP8781.473ENSHBUG00000015530u2surp9580.963Haplochromis_burtoni
ENSLACG00000012318U2SURP9988.639ENSHGLG00000017227-9488.614Heterocephalus_glaber_female
ENSLACG00000012318U2SURP9669.380ENSHGLG00000018851-8864.078Heterocephalus_glaber_female
ENSLACG00000012318U2SURP9669.380ENSHGLG00100001134-8864.078Heterocephalus_glaber_male
ENSLACG00000012318U2SURP9390.000ENSHGLG00100001176-8863.538Heterocephalus_glaber_male
ENSLACG00000012318U2SURP9988.639ENSHGLG00100005796-9488.614Heterocephalus_glaber_male
ENSLACG00000012318U2SURP9472.197ENSHCOG00000011508u2surp9270.488Hippocampus_comes
ENSLACG00000012318U2SURP9651.574ENSIPUG00000019652zgc:1630988757.070Ictalurus_punctatus
ENSLACG00000012318U2SURP9474.276ENSIPUG00000007822u2surp9673.589Ictalurus_punctatus
ENSLACG00000012318U2SURP9988.627ENSSTOG00000015997U2SURP9088.602Ictidomys_tridecemlineatus
ENSLACG00000012318U2SURP9988.639ENSJJAG00000021595U2surp9488.614Jaculus_jaculus
ENSLACG00000012318U2SURP9950.000ENSKMAG00000009727zgc:1630988548.747Kryptolebias_marmoratus
ENSLACG00000012318U2SURP9770.784ENSKMAG00000012083u2surp9771.665Kryptolebias_marmoratus
ENSLACG00000012318U2SURP9570.033ENSLBEG00000026284u2surp9770.779Labrus_bergylta
ENSLACG00000012318U2SURP8252.308ENSLBEG00000002498zgc:1630988166.667Labrus_bergylta
ENSLACG00000012318U2SURP8355.311ENSLOCG00000013596zgc:1630989455.446Lepisosteus_oculatus
ENSLACG00000012318U2SURP9582.287ENSLOCG00000007828u2surp9681.750Lepisosteus_oculatus
ENSLACG00000012318U2SURP9988.532ENSLAFG00000002566U2SURP9088.507Loxodonta_africana
ENSLACG00000012318U2SURP9988.639ENSMFAG00000031084U2SURP9688.614Macaca_fascicularis
ENSLACG00000012318U2SURP9988.639ENSMMUG00000002775U2SURP9588.614Macaca_mulatta
ENSLACG00000012318U2SURP9988.639ENSMNEG00000034553U2SURP9688.614Macaca_nemestrina
ENSLACG00000012318U2SURP9988.639ENSMLEG00000021031U2SURP9688.614Mandrillus_leucophaeus
ENSLACG00000012318U2SURP9652.324ENSMAMG00000016977zgc:1630988554.246Mastacembelus_armatus
ENSLACG00000012318U2SURP9073.684ENSMAMG00000003004u2surp9671.670Mastacembelus_armatus
ENSLACG00000012318U2SURP9472.075ENSMZEG00005021991u2surp9671.624Maylandia_zebra
ENSLACG00000012318U2SURP9751.304ENSMZEG00005016805zgc:1630988849.936Maylandia_zebra
ENSLACG00000012318U2SURP9989.056ENSMGAG00000006549U2SURP9789.056Meleagris_gallopavo
ENSLACG00000012318U2SURP9988.627ENSMICG00000049294U2SURP9088.602Microcebus_murinus
ENSLACG00000012318U2SURP9988.317ENSMOCG00000000631U2surp9488.292Microtus_ochrogaster
ENSLACG00000012318U2SURP9744.846ENSMMOG00000016677zgc:1630988345.918Mola_mola
ENSLACG00000012318U2SURP9468.439ENSMMOG00000004474u2surp9671.519Mola_mola
ENSLACG00000012318U2SURP9980.517ENSMODG00000010847-9480.517Monodelphis_domestica
ENSLACG00000012318U2SURP9985.882ENSMODG00000021242-8985.882Monodelphis_domestica
ENSLACG00000012318U2SURP9772.366ENSMALG00000007458u2surp9770.971Monopterus_albus
ENSLACG00000012318U2SURP9752.299ENSMALG00000015881zgc:1630988954.777Monopterus_albus
ENSLACG00000012318U2SURP9987.523MGP_CAROLIEiJ_G0032530-8487.523Mus_caroli
ENSLACG00000012318U2SURP9988.519ENSMUSG00000032407U2surp9488.400Mus_musculus
ENSLACG00000012318U2SURP9988.627MGP_PahariEiJ_G0015398U2surp9488.507Mus_pahari
ENSLACG00000012318U2SURP9988.519MGP_SPRETEiJ_G0033672U2surp9488.400Mus_spretus
ENSLACG00000012318U2SURP9988.639ENSMPUG00000011855U2SURP9088.614Mustela_putorius_furo
ENSLACG00000012318U2SURP10084.730ENSMLUG00000014633-9084.855Myotis_lucifugus
ENSLACG00000012318U2SURP9988.449ENSMLUG00000002920-9288.424Myotis_lucifugus
ENSLACG00000012318U2SURP9988.639ENSNGAG00000013707U2surp9488.614Nannospalax_galili
ENSLACG00000012318U2SURP7575.596ENSNBRG00000017162u2surp9078.723Neolamprologus_brichardi
ENSLACG00000012318U2SURP9988.639ENSNLEG00000004915U2SURP9588.614Nomascus_leucogenys
ENSLACG00000012318U2SURP8089.474ENSMEUG00000000127U2SURP7388.235Notamacropus_eugenii
ENSLACG00000012318U2SURP9570.694ENSOPRG00000011328U2SURP8488.000Ochotona_princeps
ENSLACG00000012318U2SURP9988.532ENSODEG00000008767U2SURP9488.507Octodon_degus
ENSLACG00000012318U2SURP9075.029ENSONIG00000005909u2surp9672.737Oreochromis_niloticus
ENSLACG00000012318U2SURP9652.074ENSONIG00000005263zgc:1630988354.268Oreochromis_niloticus
ENSLACG00000012318U2SURP9982.189ENSOANG00000003644U2SURP9081.974Ornithorhynchus_anatinus
ENSLACG00000012318U2SURP9988.639ENSOCUG00000012121U2SURP9088.614Oryctolagus_cuniculus
ENSLACG00000012318U2SURP9152.607ENSORLG00000007141zgc:1630988754.231Oryzias_latipes
ENSLACG00000012318U2SURP9770.766ENSORLG00000010235u2surp9571.882Oryzias_latipes
ENSLACG00000012318U2SURP9153.009ENSORLG00020005525zgc:1630988754.744Oryzias_latipes_hni
ENSLACG00000012318U2SURP8575.371ENSORLG00020011726u2surp9375.248Oryzias_latipes_hni
ENSLACG00000012318U2SURP9152.431ENSORLG00015010776zgc:1630988754.231Oryzias_latipes_hsok
ENSLACG00000012318U2SURP9770.658ENSORLG00015011465u2surp9571.776Oryzias_latipes_hsok
ENSLACG00000012318U2SURP9152.784ENSOMEG00000002172zgc:1630988754.511Oryzias_melastigma
ENSLACG00000012318U2SURP8575.155ENSOMEG00000004962u2surp9877.778Oryzias_melastigma
ENSLACG00000012318U2SURP9988.639ENSOGAG00000004335U2SURP9088.614Otolemur_garnettii
ENSLACG00000012318U2SURP9987.740ENSOARG00000005871U2SURP9087.821Ovis_aries
ENSLACG00000012318U2SURP9988.639ENSPPRG00000022258U2SURP9088.614Panthera_pardus
ENSLACG00000012318U2SURP9988.317ENSPTIG00000001167U2SURP9088.292Panthera_tigris_altaica
ENSLACG00000012318U2SURP9988.746ENSPTRG00000015489U2SURP9088.722Pan_troglodytes
ENSLACG00000012318U2SURP9988.639ENSPANG00000000710U2SURP9688.614Papio_anubis
ENSLACG00000012318U2SURP9675.691ENSPKIG00000021859u2surp9675.107Paramormyrops_kingsleyae
ENSLACG00000012318U2SURP9952.295ENSPKIG00000017920zgc:1630988560.149Paramormyrops_kingsleyae
ENSLACG00000012318U2SURP9988.273ENSPSIG00000016578U2SURP9988.486Pelodiscus_sinensis
ENSLACG00000012318U2SURP8349.617ENSPMGG00000008623zgc:1630988967.702Periophthalmus_magnuspinnatus
ENSLACG00000012318U2SURP9988.103ENSPEMG00000020825U2surp9488.077Peromyscus_maniculatus_bairdii
ENSLACG00000012318U2SURP9986.359ENSPCIG00000004246U2SURP9986.359Phascolarctos_cinereus
ENSLACG00000012318U2SURP9648.168ENSPFOG00000011956zgc:1630988553.640Poecilia_formosa
ENSLACG00000012318U2SURP9471.508ENSPFOG00000014489u2surp9672.468Poecilia_formosa
ENSLACG00000012318U2SURP9151.591ENSPLAG00000008250zgc:1630988553.512Poecilia_latipinna
ENSLACG00000012318U2SURP9471.508ENSPLAG00000006816u2surp9672.468Poecilia_latipinna
ENSLACG00000012318U2SURP9152.229ENSPMEG00000017413zgc:1630988554.151Poecilia_mexicana
ENSLACG00000012318U2SURP9471.350ENSPMEG00000014599u2surp9770.811Poecilia_mexicana
ENSLACG00000012318U2SURP8575.558ENSPREG00000009325u2surp9671.125Poecilia_reticulata
ENSLACG00000012318U2SURP9151.023ENSPREG00000023067zgc:1630988453.257Poecilia_reticulata
ENSLACG00000012318U2SURP9988.305ENSPPYG00000014178U2SURP9088.280Pongo_abelii
ENSLACG00000012318U2SURP9981.672ENSPCAG00000015251U2SURP9281.633Procavia_capensis
ENSLACG00000012318U2SURP9984.696ENSPCOG00000019599U2SURP9384.155Propithecus_coquereli
ENSLACG00000012318U2SURP9983.173ENSPVAG00000016077U2SURP9083.136Pteropus_vampyrus
ENSLACG00000012318U2SURP7377.650ENSPNYG00000006246u2surp7877.650Pundamilia_nyererei
ENSLACG00000012318U2SURP9670.121ENSPNAG00000001722u2surp9376.970Pygocentrus_nattereri
ENSLACG00000012318U2SURP9651.739ENSPNAG00000023885zgc:1630988656.417Pygocentrus_nattereri
ENSLACG00000012318U2SURP9988.424ENSRNOG00000008607U2surp9488.400Rattus_norvegicus
ENSLACG00000012318U2SURP9987.513ENSRBIG00000041099U2SURP9187.716Rhinopithecus_bieti
ENSLACG00000012318U2SURP9988.639ENSRROG00000043548U2SURP9688.614Rhinopithecus_roxellana
ENSLACG00000012318U2SURP9988.639ENSSBOG00000027984U2SURP9088.614Saimiri_boliviensis_boliviensis
ENSLACG00000012318U2SURP9988.829ENSSHAG00000014407U2SURP9088.829Sarcophilus_harrisii
ENSLACG00000012318U2SURP8657.966ENSSFOG00015004962zgc:1630988359.004Scleropages_formosus
ENSLACG00000012318U2SURP9277.199ENSSFOG00015010470u2surp9474.571Scleropages_formosus
ENSLACG00000012318U2SURP9651.965ENSSMAG00000013442zgc:1630988555.128Scophthalmus_maximus
ENSLACG00000012318U2SURP9471.175ENSSMAG00000012475u2surp9671.518Scophthalmus_maximus
ENSLACG00000012318U2SURP9652.334ENSSDUG00000009881zgc:1630988555.330Seriola_dumerili
ENSLACG00000012318U2SURP9567.609ENSSDUG00000006136u2surp9671.097Seriola_dumerili
ENSLACG00000012318U2SURP9074.562ENSSLDG00000022385u2surp9672.996Seriola_lalandi_dorsalis
ENSLACG00000012318U2SURP9652.397ENSSLDG00000020364zgc:1630988957.637Seriola_lalandi_dorsalis
ENSLACG00000012318U2SURP8990.054ENSSARG00000013779U2SURP8290.164Sorex_araneus
ENSLACG00000012318U2SURP9987.661ENSSPUG00000013871U2SURP9887.661Sphenodon_punctatus
ENSLACG00000012318U2SURP9571.554ENSSPAG00000020432u2surp9773.085Stegastes_partitus
ENSLACG00000012318U2SURP9988.639ENSSSCG00000011684U2SURP9288.614Sus_scrofa
ENSLACG00000012318U2SURP9989.270ENSTGUG00000008687U2SURP9789.270Taeniopygia_guttata
ENSLACG00000012318U2SURP9568.996ENSTRUG00000017810u2surp9769.214Takifugu_rubripes
ENSLACG00000012318U2SURP9470.699ENSTNIG00000012767u2surp9771.067Tetraodon_nigroviridis
ENSLACG00000012318U2SURP9979.592ENSTBEG00000016313U2SURP9080.538Tupaia_belangeri
ENSLACG00000012318U2SURP9987.889ENSTTRG00000017170U2SURP9087.970Tursiops_truncatus
ENSLACG00000012318U2SURP9988.639ENSUAMG00000028259U2SURP9685.822Ursus_americanus
ENSLACG00000012318U2SURP9986.452ENSVPAG00000004697U2SURP9085.991Vicugna_pacos
ENSLACG00000012318U2SURP9988.746ENSVVUG00000021495U2SURP9088.722Vulpes_vulpes
ENSLACG00000012318U2SURP9986.006ENSXETG00000022133u2surp9585.791Xenopus_tropicalis
ENSLACG00000012318U2SURP8575.339ENSXCOG00000011427u2surp8975.432Xiphophorus_couchianus
ENSLACG00000012318U2SURP7670.968ENSXCOG00000007025zgc:1630988371.429Xiphophorus_couchianus
ENSLACG00000012318U2SURP8475.528ENSXMAG00000002608u2surp9770.811Xiphophorus_maculatus
ENSLACG00000012318U2SURP9151.932ENSXMAG00000012662zgc:1630988553.895Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us