EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000012333 (Gene tree)
Gene ID: 102350973
Gene Symbol: RBBP6
Alias: P2P-R|PACT|SNAMA
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 53529 bases
Position: chrJH127014.1:703791-757319
Accession: 102350973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014010	zf-CCHC_2	PF13696.6	3.1e-09	1	1
ENSLACP00000014011	zf-CCHC_2	PF13696.6	3.1e-09	1	1
ENSLACP00000014010	zf-CCHC	PF00098.23	5.1e-05	1	1
ENSLACP00000014011	zf-CCHC	PF00098.23	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014110	RBBP6-202	5376	-	ENSLACP00000014011	1791 (aa)	-	H3AWJ0
ENSLACT00000014109	RBBP6-201	7085	-	ENSLACP00000014010	1771 (aa)	XP_014345418	H3AWI9

Gene Model

Click here to download ENSLACG00000012333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012333	RBBP6	94	60.944	ENSG00000122257	RBBP6	100	93.333	Homo_sapiens
ENSLACG00000012333	RBBP6	93	61.521	ENSAMEG00000009312	RBBP6	99	62.514	Ailuropoda_melanoleuca
ENSLACG00000012333	RBBP6	64	58.839	ENSANAG00000037384	RBBP6	95	82.171	Aotus_nancymaae
ENSLACG00000012333	RBBP6	64	58.839	ENSCJAG00000020661	RBBP6	95	82.171	Callithrix_jacchus
ENSLACG00000012333	RBBP6	63	59.103	ENSTSYG00000000822	RBBP6	95	86.047	Carlito_syrichta
ENSLACG00000012333	RBBP6	80	67.308	ENSCAPG00000012399	RBBP6	92	74.367	Cavia_aperea
ENSLACG00000012333	RBBP6	63	58.121	ENSCPOG00000040025	RBBP6	99	61.450	Cavia_porcellus
ENSLACG00000012333	RBBP6	64	58.666	ENSCCAG00000023229	RBBP6	95	85.788	Cebus_capucinus
ENSLACG00000012333	RBBP6	97	61.316	ENSCATG00000033601	RBBP6	95	85.788	Cercocebus_atys
ENSLACG00000012333	RBBP6	63	56.942	ENSCLAG00000009872	RBBP6	99	61.665	Chinchilla_lanigera
ENSLACG00000012333	RBBP6	97	61.316	ENSCSAG00000006609	RBBP6	99	63.014	Chlorocebus_sabaeus
ENSLACG00000012333	RBBP6	54	69.052	ENSCHOG00000000278	RBBP6	72	66.904	Choloepus_hoffmanni
ENSLACG00000012333	RBBP6	90	71.751	ENSCPBG00000001818	RBBP6	99	72.274	Chrysemys_picta_bellii
ENSLACG00000012333	RBBP6	97	61.731	ENSCANG00000039613	RBBP6	95	86.047	Colobus_angolensis_palliatus
ENSLACG00000012333	RBBP6	94	60.818	ENSDNOG00000048802	RBBP6	99	61.749	Dasypus_novemcinctus
ENSLACG00000012333	RBBP6	63	56.503	ENSFCAG00000043694	RBBP6	82	86.788	Felis_catus
ENSLACG00000012333	RBBP6	94	61.238	ENSFDAG00000013132	RBBP6	96	62.027	Fukomys_damarensis
ENSLACG00000012333	RBBP6	86	71.402	ENSGALG00000006043	RBBP6	88	71.940	Gallus_gallus
ENSLACG00000012333	RBBP6	90	71.563	ENSGAGG00000004371	RBBP6	99	71.719	Gopherus_agassizii
ENSLACG00000012333	RBBP6	63	58.663	ENSGGOG00000007137	RBBP6	95	86.305	Gorilla_gorilla
ENSLACG00000012333	RBBP6	93	62.309	ENSHGLG00000008327	RBBP6	99	62.596	Heterocephalus_glaber_female
ENSLACG00000012333	RBBP6	88	66.905	ENSHGLG00100007773	RBBP6	81	64.591	Heterocephalus_glaber_male
ENSLACG00000012333	RBBP6	94	60.580	ENSSTOG00000016006	RBBP6	99	62.685	Ictidomys_tridecemlineatus
ENSLACG00000012333	RBBP6	93	62.426	ENSLAFG00000009528	RBBP6	99	62.973	Loxodonta_africana
ENSLACG00000012333	RBBP6	97	61.582	ENSMFAG00000038627	RBBP6	95	85.788	Macaca_fascicularis
ENSLACG00000012333	RBBP6	97	61.146	ENSMMUG00000015908	RBBP6	95	85.788	Macaca_mulatta
ENSLACG00000012333	RBBP6	93	62.662	ENSMNEG00000033630	RBBP6	95	85.788	Macaca_nemestrina
ENSLACG00000012333	RBBP6	97	61.696	ENSMLEG00000030073	RBBP6	95	85.788	Mandrillus_leucophaeus
ENSLACG00000012333	RBBP6	93	61.388	ENSMICG00000008059	RBBP6	83	85.788	Microcebus_murinus
ENSLACG00000012333	RBBP6	93	60.970	ENSMODG00000016318	-	99	61.453	Monodelphis_domestica
ENSLACG00000012333	RBBP6	67	60.825	MGP_CAROLIEiJ_G0030424	-	99	61.578	Mus_caroli
ENSLACG00000012333	RBBP6	94	59.522	ENSMUSG00000030779	Rbbp6	97	59.703	Mus_musculus
ENSLACG00000012333	RBBP6	64	56.771	MGP_PahariEiJ_G0013634	Rbbp6	93	58.570	Mus_pahari
ENSLACG00000012333	RBBP6	64	57.168	MGP_SPRETEiJ_G0031538	Rbbp6	93	61.307	Mus_spretus
ENSLACG00000012333	RBBP6	63	57.807	ENSMLUG00000010601	-	66	58.396	Myotis_lucifugus
ENSLACG00000012333	RBBP6	71	69.052	ENSNLEG00000011896	RBBP6	95	85.788	Nomascus_leucogenys
ENSLACG00000012333	RBBP6	88	62.246	ENSMEUG00000014491	RBBP6	90	62.187	Notamacropus_eugenii
ENSLACG00000012333	RBBP6	60	81.061	ENSOPRG00000016272	RBBP6	61	88.571	Ochotona_princeps
ENSLACG00000012333	RBBP6	91	65.488	ENSOANG00000007673	RBBP6	97	67.130	Ornithorhynchus_anatinus
ENSLACG00000012333	RBBP6	93	60.554	ENSOCUG00000004346	RBBP6	96	60.271	Oryctolagus_cuniculus
ENSLACG00000012333	RBBP6	63	56.591	ENSPPRG00000004074	RBBP6	82	86.598	Panthera_pardus
ENSLACG00000012333	RBBP6	63	56.591	ENSPTIG00000010342	RBBP6	82	86.598	Panthera_tigris_altaica
ENSLACG00000012333	RBBP6	63	58.663	ENSPTRG00000007897	RBBP6	95	86.047	Pan_troglodytes
ENSLACG00000012333	RBBP6	97	61.696	ENSPANG00000019625	RBBP6	95	86.047	Papio_anubis
ENSLACG00000012333	RBBP6	93	62.667	ENSPCIG00000014000	RBBP6	93	62.551	Phascolarctos_cinereus
ENSLACG00000012333	RBBP6	63	58.891	ENSPCOG00000021939	RBBP6	83	85.788	Propithecus_coquereli
ENSLACG00000012333	RBBP6	58	68.750	ENSPVAG00000001110	RBBP6	81	65.907	Pteropus_vampyrus
ENSLACG00000012333	RBBP6	90	65.652	ENSRBIG00000004517	RBBP6	99	65.511	Rhinopithecus_bieti
ENSLACG00000012333	RBBP6	97	61.582	ENSRROG00000032092	RBBP6	95	85.788	Rhinopithecus_roxellana
ENSLACG00000012333	RBBP6	64	58.666	ENSSBOG00000021666	RBBP6	95	82.171	Saimiri_boliviensis_boliviensis
ENSLACG00000012333	RBBP6	59	55.307	ENSSARG00000004977	RBBP6	69	56.987	Sorex_araneus
ENSLACG00000012333	RBBP6	65	65.055	ENSVPAG00000006458	RBBP6	78	64.738	Vicugna_pacos