EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012372 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 721 bases
Position: chrJH126844.1:707641-708361
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014056	Exo_endo_phos	PF03372.23	7.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014155	-	693	-	ENSLACP00000014056	231 (aa)	-	H3AWN5

Gene Model

Click here to download ENSLACG00000012372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012372	-	100	85.892	ENSLACG00000012713	-	85	85.892
ENSLACG00000012372	-	97	65.812	ENSLACG00000014338	-	85	65.272
ENSLACG00000012372	-	99	87.446	ENSLACG00000001409	-	87	87.446
ENSLACG00000012372	-	100	80.498	ENSLACG00000011887	-	86	80.498
ENSLACG00000012372	-	100	87.552	ENSLACG00000000142	-	85	87.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012372	-	99	60.924	ENSACAG00000022555	-	81	60.924	Anolis_carolinensis
ENSLACG00000012372	-	98	60.593	ENSACAG00000026622	-	89	60.593	Anolis_carolinensis
ENSLACG00000012372	-	99	59.583	ENSACAG00000022765	-	81	59.583	Anolis_carolinensis
ENSLACG00000012372	-	98	57.203	ENSACAG00000022737	-	87	57.203	Anolis_carolinensis
ENSLACG00000012372	-	99	56.250	ENSACAG00000024197	-	81	56.250	Anolis_carolinensis
ENSLACG00000012372	-	99	62.500	ENSACAG00000027999	-	83	62.500	Anolis_carolinensis
ENSLACG00000012372	-	99	57.500	ENSACAG00000023913	-	84	57.500	Anolis_carolinensis
ENSLACG00000012372	-	97	57.082	ENSACAG00000026617	-	85	57.082	Anolis_carolinensis
ENSLACG00000012372	-	98	61.017	ENSACAG00000027606	-	90	61.017	Anolis_carolinensis
ENSLACG00000012372	-	100	54.772	ENSACAG00000026078	-	84	54.772	Anolis_carolinensis
ENSLACG00000012372	-	99	52.500	ENSCPBG00000013562	-	62	53.138	Chrysemys_picta_bellii
ENSLACG00000012372	-	99	52.917	ENSMODG00000024905	-	84	52.917	Monodelphis_domestica
ENSLACG00000012372	-	99	58.009	ENSMODG00000024667	-	89	58.009	Monodelphis_domestica
ENSLACG00000012372	-	100	52.066	ENSMODG00000024845	-	90	52.066	Monodelphis_domestica
ENSLACG00000012372	-	98	50.840	ENSMODG00000024409	-	84	50.840	Monodelphis_domestica
ENSLACG00000012372	-	99	54.167	ENSMODG00000012913	-	86	54.167	Monodelphis_domestica