EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012377 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 5002 bases
Position: chrJH127504.1:708420-713421
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014061	RVT_1	PF00078.27	3.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014160	-	2739	-	ENSLACP00000014061	913 (aa)	-	H3AWP0

Gene Model

Click here to download ENSLACG00000012377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012377	-	62	32.437	ENSLACG00000012911	-	86	32.437
ENSLACG00000012377	-	52	52.410	ENSLACG00000001539	-	98	52.410
ENSLACG00000012377	-	51	80.079	ENSLACG00000011412	-	100	80.079
ENSLACG00000012377	-	62	58.863	ENSLACG00000006107	-	94	58.863
ENSLACG00000012377	-	60	43.571	ENSLACG00000004832	-	98	43.571
ENSLACG00000012377	-	54	55.706	ENSLACG00000013633	-	97	55.706
ENSLACG00000012377	-	66	76.562	ENSLACG00000013546	-	99	76.562
ENSLACG00000012377	-	66	81.951	ENSLACG00000010539	-	82	81.951
ENSLACG00000012377	-	63	85.043	ENSLACG00000005686	-	100	85.043
ENSLACG00000012377	-	59	59.646	ENSLACG00000016962	-	100	79.675
ENSLACG00000012377	-	63	31.063	ENSLACG00000004233	-	89	31.063
ENSLACG00000012377	-	53	54.314	ENSLACG00000005758	-	89	60.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012377	-	98	32.605	ENSACLG00000002396	-	78	32.605	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.941	ENSACLG00000014121	-	75	32.941	Astatotilapia_calliptera
ENSLACG00000012377	-	76	32.605	ENSACLG00000004963	-	91	32.605	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.941	ENSACLG00000003757	-	78	32.941	Astatotilapia_calliptera
ENSLACG00000012377	-	74	33.445	ENSACLG00000017721	-	88	33.445	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.941	ENSACLG00000021834	-	84	32.941	Astatotilapia_calliptera
ENSLACG00000012377	-	77	33.109	ENSACLG00000005419	-	91	33.109	Astatotilapia_calliptera
ENSLACG00000012377	-	76	32.605	ENSACLG00000006057	-	91	32.605	Astatotilapia_calliptera
ENSLACG00000012377	-	90	32.773	ENSACLG00000013139	-	92	32.773	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.605	ENSACLG00000017392	-	79	32.605	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.941	ENSACLG00000007447	-	78	33.109	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.605	ENSACLG00000011507	-	78	32.605	Astatotilapia_calliptera
ENSLACG00000012377	-	82	33.445	ENSACLG00000021406	-	87	33.445	Astatotilapia_calliptera
ENSLACG00000012377	-	93	33.277	ENSACLG00000013967	-	82	33.277	Astatotilapia_calliptera
ENSLACG00000012377	-	93	31.509	ENSACLG00000002775	-	86	31.675	Astatotilapia_calliptera
ENSLACG00000012377	-	93	33.613	ENSACLG00000007511	-	75	33.613	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.773	ENSACLG00000017606	-	84	32.773	Astatotilapia_calliptera
ENSLACG00000012377	-	93	32.941	ENSACLG00000009148	-	89	32.941	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.773	ENSACLG00000016079	-	84	32.773	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.941	ENSACLG00000013574	-	91	32.941	Astatotilapia_calliptera
ENSLACG00000012377	-	98	32.773	ENSACLG00000013632	-	78	32.773	Astatotilapia_calliptera
ENSLACG00000012377	-	94	33.333	ENSORLG00000026631	-	76	33.333	Oryzias_latipes
ENSLACG00000012377	-	94	32.504	ENSORLG00000025841	-	77	32.504	Oryzias_latipes
ENSLACG00000012377	-	86	32.504	ENSORLG00000027125	-	90	32.504	Oryzias_latipes
ENSLACG00000012377	-	79	32.642	ENSORLG00000023528	-	91	32.642	Oryzias_latipes
ENSLACG00000012377	-	93	32.492	ENSORLG00000028428	-	72	32.492	Oryzias_latipes
ENSLACG00000012377	-	82	32.338	ENSORLG00020006197	-	90	32.338	Oryzias_latipes_hni
ENSLACG00000012377	-	94	32.504	ENSORLG00020010783	-	76	32.504	Oryzias_latipes_hni
ENSLACG00000012377	-	86	33.058	ENSORLG00020020703	-	92	32.893	Oryzias_latipes_hni
ENSLACG00000012377	-	91	33.568	ENSORLG00020004983	-	76	33.568	Oryzias_latipes_hni
ENSLACG00000012377	-	94	32.231	ENSPREG00000022240	-	79	32.231	Poecilia_reticulata