EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012531 (Gene tree)
Gene ID: 102361169
Gene Symbol: ATXN2
Alias: ATX2|SCA2|TNRC13
Full Name: ataxin 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 75793 bases
Position: chrJH126873.1:731715-807507
Accession: 102361169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014230	PAM2	PF07145.15	1.2e-06	1	1
ENSLACP00000014229	PAM2	PF07145.15	1.2e-06	1	1
ENSLACP00000014230	LsmAD	PF06741.13	1.4e-15	1	1
ENSLACP00000014229	LsmAD	PF06741.13	1.4e-15	1	1
ENSLACP00000014229	SM-ATX	PF14438.6	1e-21	1	1
ENSLACP00000014230	SM-ATX	PF14438.6	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014330	ATXN2-202	3213	-	ENSLACP00000014230	1070 (aa)	-	H3AX59
ENSLACT00000014329	ATXN2-201	4618	XM_005996400	ENSLACP00000014229	1085 (aa)	-	H3AX58

Gene Model

Click here to download ENSLACG00000012531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012531	ATXN2	99	53.719	ENSLACG00000006023	ATXN2L	94	58.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012531	ATXN2	99	75.092	ENSG00000204842	ATXN2	99	83.673	Homo_sapiens
ENSLACG00000012531	ATXN2	100	74.793	ENSAMEG00000013747	ATXN2	100	74.701	Ailuropoda_melanoleuca
ENSLACG00000012531	ATXN2	97	59.398	ENSATEG00000018587	atxn2	100	60.000	Anabas_testudineus
ENSLACG00000012531	ATXN2	100	77.093	ENSAPLG00000008724	ATXN2	100	76.541	Anas_platyrhynchos
ENSLACG00000012531	ATXN2	100	70.448	ENSACAG00000002419	ATXN2	100	70.357	Anolis_carolinensis
ENSLACG00000012531	ATXN2	100	74.793	ENSANAG00000022522	ATXN2	100	72.844	Aotus_nancymaae
ENSLACG00000012531	ATXN2	97	60.519	ENSACLG00000013359	atxn2	97	60.204	Astatotilapia_calliptera
ENSLACG00000012531	ATXN2	94	70.739	ENSAMXG00000002342	atxn2	97	71.987	Astyanax_mexicanus
ENSLACG00000012531	ATXN2	99	74.421	ENSBTAG00000022069	ATXN2	100	74.836	Bos_taurus
ENSLACG00000012531	ATXN2	99	74.561	ENSCJAG00000011756	ATXN2	100	72.302	Callithrix_jacchus
ENSLACG00000012531	ATXN2	99	74.307	ENSCAFG00000008606	ATXN2	82	74.173	Canis_familiaris
ENSLACG00000012531	ATXN2	98	74.272	ENSCAFG00020017041	ATXN2	100	74.178	Canis_lupus_dingo
ENSLACG00000012531	ATXN2	99	74.331	ENSCHIG00000012141	ATXN2	82	74.608	Capra_hircus
ENSLACG00000012531	ATXN2	99	74.770	ENSTSYG00000002717	ATXN2	100	73.088	Carlito_syrichta
ENSLACG00000012531	ATXN2	82	66.404	ENSCAPG00000013332	ATXN2	99	67.362	Cavia_aperea
ENSLACG00000012531	ATXN2	100	74.885	ENSCPOG00000001390	ATXN2	96	73.023	Cavia_porcellus
ENSLACG00000012531	ATXN2	100	74.885	ENSCCAG00000026267	ATXN2	100	72.936	Cebus_capucinus
ENSLACG00000012531	ATXN2	99	74.908	ENSCATG00000017877	ATXN2	100	72.302	Cercocebus_atys
ENSLACG00000012531	ATXN2	100	75.069	ENSCLAG00000009324	ATXN2	98	74.609	Chinchilla_lanigera
ENSLACG00000012531	ATXN2	99	75.000	ENSCSAG00000002590	ATXN2	93	74.885	Chlorocebus_sabaeus
ENSLACG00000012531	ATXN2	81	65.984	ENSCHOG00000004284	ATXN2	86	65.984	Choloepus_hoffmanni
ENSLACG00000012531	ATXN2	99	74.862	ENSCANG00000042302	ATXN2	100	74.678	Colobus_angolensis_palliatus
ENSLACG00000012531	ATXN2	99	71.863	ENSCGRG00001022603	Atxn2	87	67.895	Cricetulus_griseus_chok1gshd
ENSLACG00000012531	ATXN2	100	74.425	ENSCGRG00000015823	Atxn2	98	74.149	Cricetulus_griseus_crigri
ENSLACG00000012531	ATXN2	100	53.287	ENSCSEG00000009072	-	97	70.570	Cynoglossus_semilaevis
ENSLACG00000012531	ATXN2	96	71.515	ENSCVAG00000020160	atxn2	97	74.183	Cyprinodon_variegatus
ENSLACG00000012531	ATXN2	100	64.170	ENSDARG00000052897	atxn2	100	62.653	Danio_rerio
ENSLACG00000012531	ATXN2	99	74.446	ENSDNOG00000015696	ATXN2	100	73.429	Dasypus_novemcinctus
ENSLACG00000012531	ATXN2	99	68.819	ENSDORG00000000808	Atxn2	99	68.606	Dipodomys_ordii
ENSLACG00000012531	ATXN2	94	72.222	ENSETEG00000005224	ATXN2	77	72.222	Echinops_telfairi
ENSLACG00000012531	ATXN2	100	74.701	ENSEASG00005012077	ATXN2	99	74.609	Equus_asinus_asinus
ENSLACG00000012531	ATXN2	100	74.885	ENSECAG00000014347	ATXN2	80	74.064	Equus_caballus
ENSLACG00000012531	ATXN2	71	81.639	ENSEEUG00000014635	-	70	81.639	Erinaceus_europaeus
ENSLACG00000012531	ATXN2	98	64.631	ENSELUG00000019632	atxn2	99	68.678	Esox_lucius
ENSLACG00000012531	ATXN2	99	75.023	ENSFCAG00000003178	ATXN2	100	72.397	Felis_catus
ENSLACG00000012531	ATXN2	98	74.203	ENSFALG00000009001	ATXN2	100	73.569	Ficedula_albicollis
ENSLACG00000012531	ATXN2	99	75.414	ENSFDAG00000020942	ATXN2	100	75.138	Fukomys_damarensis
ENSLACG00000012531	ATXN2	93	71.176	ENSFHEG00000019561	atxn2	98	71.182	Fundulus_heteroclitus
ENSLACG00000012531	ATXN2	90	66.954	ENSGMOG00000007412	atxn2	91	64.028	Gadus_morhua
ENSLACG00000012531	ATXN2	100	71.912	ENSGALG00000004625	ATXN2	99	71.534	Gallus_gallus
ENSLACG00000012531	ATXN2	95	72.121	ENSGAFG00000003302	atxn2	96	74.837	Gambusia_affinis
ENSLACG00000012531	ATXN2	99	61.162	ENSGACG00000006295	atxn2	100	61.504	Gasterosteus_aculeatus
ENSLACG00000012531	ATXN2	98	74.930	ENSGGOG00000002137	ATXN2	100	74.742	Gorilla_gorilla
ENSLACG00000012531	ATXN2	94	74.679	ENSHBUG00000002921	atxn2	96	75.163	Haplochromis_burtoni
ENSLACG00000012531	ATXN2	99	73.339	ENSHGLG00000009812	ATXN2	84	73.597	Heterocephalus_glaber_female
ENSLACG00000012531	ATXN2	99	74.954	ENSHGLG00100019351	ATXN2	100	75.138	Heterocephalus_glaber_male
ENSLACG00000012531	ATXN2	96	69.436	ENSHCOG00000005278	atxn2	93	71.519	Hippocampus_comes
ENSLACG00000012531	ATXN2	100	48.677	ENSIPUG00000016649	atxn2	100	67.614	Ictalurus_punctatus
ENSLACG00000012531	ATXN2	99	74.678	ENSSTOG00000000978	ATXN2	100	70.073	Ictidomys_tridecemlineatus
ENSLACG00000012531	ATXN2	56	54.575	ENSLBEG00000017484	atxn2	96	55.538	Labrus_bergylta
ENSLACG00000012531	ATXN2	99	73.529	ENSLOCG00000007880	atxn2	99	76.232	Lepisosteus_oculatus
ENSLACG00000012531	ATXN2	100	75.298	ENSLAFG00000007416	ATXN2	100	74.839	Loxodonta_africana
ENSLACG00000012531	ATXN2	99	74.815	ENSMFAG00000000374	ATXN2	100	72.844	Macaca_fascicularis
ENSLACG00000012531	ATXN2	98	74.930	ENSMMUG00000002226	ATXN2	100	74.742	Macaca_mulatta
ENSLACG00000012531	ATXN2	99	74.815	ENSMNEG00000035588	ATXN2	100	72.844	Macaca_nemestrina
ENSLACG00000012531	ATXN2	99	74.862	ENSMLEG00000024324	ATXN2	100	74.678	Mandrillus_leucophaeus
ENSLACG00000012531	ATXN2	94	74.679	ENSMZEG00005008476	atxn2	96	75.163	Maylandia_zebra
ENSLACG00000012531	ATXN2	100	77.043	ENSMGAG00000005288	ATXN2	100	76.492	Meleagris_gallopavo
ENSLACG00000012531	ATXN2	64	68.254	ENSMAUG00000008223	-	99	70.045	Mesocricetus_auratus
ENSLACG00000012531	ATXN2	98	75.023	ENSMICG00000013541	ATXN2	100	74.836	Microcebus_murinus
ENSLACG00000012531	ATXN2	85	72.698	ENSMOCG00000005219	Atxn2	96	72.373	Microtus_ochrogaster
ENSLACG00000012531	ATXN2	92	66.423	ENSMMOG00000013189	atxn2	100	59.802	Mola_mola
ENSLACG00000012531	ATXN2	99	76.173	ENSMODG00000012221	ATXN2	84	75.069	Monodelphis_domestica
ENSLACG00000012531	ATXN2	99	74.170	MGP_CAROLIEiJ_G0027692	Atxn2	94	74.057	Mus_caroli
ENSLACG00000012531	ATXN2	99	74.170	ENSMUSG00000042605	Atxn2	99	69.896	Mus_musculus
ENSLACG00000012531	ATXN2	87	77.778	MGP_PahariEiJ_G0024272	Atxn2	99	69.598	Mus_pahari
ENSLACG00000012531	ATXN2	99	74.446	MGP_SPRETEiJ_G0028690	Atxn2	99	70.939	Mus_spretus
ENSLACG00000012531	ATXN2	100	72.677	ENSMPUG00000002212	ATXN2	100	72.861	Mustela_putorius_furo
ENSLACG00000012531	ATXN2	100	73.413	ENSMLUG00000015559	ATXN2	99	73.321	Myotis_lucifugus
ENSLACG00000012531	ATXN2	97	62.997	ENSNBRG00000015794	atxn2	99	61.887	Neolamprologus_brichardi
ENSLACG00000012531	ATXN2	99	74.860	ENSNLEG00000000484	ATXN2	100	72.844	Nomascus_leucogenys
ENSLACG00000012531	ATXN2	85	93.182	ENSMEUG00000012244	-	85	93.182	Notamacropus_eugenii
ENSLACG00000012531	ATXN2	99	71.163	ENSOPRG00000014599	ATXN2	100	70.698	Ochotona_princeps
ENSLACG00000012531	ATXN2	98	74.296	ENSODEG00000010798	ATXN2	100	73.921	Octodon_degus
ENSLACG00000012531	ATXN2	99	61.892	ENSONIG00000014521	atxn2	98	61.641	Oreochromis_niloticus
ENSLACG00000012531	ATXN2	86	76.013	ENSOANG00000004796	ATXN2	100	75.373	Ornithorhynchus_anatinus
ENSLACG00000012531	ATXN2	100	72.702	ENSOCUG00000002855	ATXN2	70	72.335	Oryctolagus_cuniculus
ENSLACG00000012531	ATXN2	88	67.281	ENSORLG00000003606	atxn2	99	66.359	Oryzias_latipes
ENSLACG00000012531	ATXN2	99	74.815	ENSOGAG00000000609	ATXN2	83	74.701	Otolemur_garnettii
ENSLACG00000012531	ATXN2	100	74.793	ENSOARG00000018223	ATXN2	99	75.069	Ovis_aries
ENSLACG00000012531	ATXN2	100	74.885	ENSPPAG00000028043	ATXN2	100	74.742	Pan_paniscus
ENSLACG00000012531	ATXN2	99	75.116	ENSPPRG00000003573	ATXN2	100	72.493	Panthera_pardus
ENSLACG00000012531	ATXN2	99	74.954	ENSPTIG00000021122	ATXN2	100	74.836	Panthera_tigris_altaica
ENSLACG00000012531	ATXN2	99	74.953	ENSPTRG00000029540	ATXN2	100	74.836	Pan_troglodytes
ENSLACG00000012531	ATXN2	99	74.860	ENSPANG00000017168	ATXN2	100	72.844	Papio_anubis
ENSLACG00000012531	ATXN2	99	65.317	ENSPKIG00000023134	atxn2	100	64.151	Paramormyrops_kingsleyae
ENSLACG00000012531	ATXN2	100	76.173	ENSPSIG00000002353	-	100	76.081	Pelodiscus_sinensis
ENSLACG00000012531	ATXN2	98	58.117	ENSPMGG00000005074	atxn2	100	58.348	Periophthalmus_magnuspinnatus
ENSLACG00000012531	ATXN2	85	73.023	ENSPEMG00000015340	Atxn2	96	72.481	Peromyscus_maniculatus_bairdii
ENSLACG00000012531	ATXN2	63	72.780	ENSPCIG00000006165	-	99	72.960	Phascolarctos_cinereus
ENSLACG00000012531	ATXN2	91	68.475	ENSPFOG00000005857	atxn2	97	55.182	Poecilia_formosa
ENSLACG00000012531	ATXN2	99	63.091	ENSPREG00000014825	atxn2	99	61.971	Poecilia_reticulata
ENSLACG00000012531	ATXN2	99	74.815	ENSPPYG00000004963	ATXN2	86	74.701	Pongo_abelii
ENSLACG00000012531	ATXN2	69	100.000	ENSPCAG00000004216	-	57	100.000	Procavia_capensis
ENSLACG00000012531	ATXN2	97	74.313	ENSPCOG00000022031	ATXN2	100	73.518	Propithecus_coquereli
ENSLACG00000012531	ATXN2	99	68.178	ENSPVAG00000013179	ATXN2	82	67.985	Pteropus_vampyrus
ENSLACG00000012531	ATXN2	54	56.952	ENSPNYG00000016981	atxn2	78	65.105	Pundamilia_nyererei
ENSLACG00000012531	ATXN2	100	73.805	ENSRNOG00000001256	Atxn2	99	73.438	Rattus_norvegicus
ENSLACG00000012531	ATXN2	99	71.970	ENSRBIG00000039212	ATXN2	100	72.015	Rhinopithecus_bieti
ENSLACG00000012531	ATXN2	99	74.678	ENSRROG00000031170	ATXN2	100	72.661	Rhinopithecus_roxellana
ENSLACG00000012531	ATXN2	98	73.119	ENSSBOG00000031563	ATXN2	100	73.028	Saimiri_boliviensis_boliviensis
ENSLACG00000012531	ATXN2	100	75.688	ENSSHAG00000007304	ATXN2	99	75.046	Sarcophilus_harrisii
ENSLACG00000012531	ATXN2	98	63.483	ENSSFOG00015017229	atxn2	52	67.577	Scleropages_formosus
ENSLACG00000012531	ATXN2	97	60.763	ENSSMAG00000004627	atxn2	100	62.066	Scophthalmus_maximus
ENSLACG00000012531	ATXN2	97	61.510	ENSSLDG00000019837	atxn2	100	61.050	Seriola_lalandi_dorsalis
ENSLACG00000012531	ATXN2	78	77.869	ENSSARG00000006291	ATXN2	79	77.869	Sorex_araneus
ENSLACG00000012531	ATXN2	99	75.463	ENSSPUG00000010317	ATXN2	92	74.444	Sphenodon_punctatus
ENSLACG00000012531	ATXN2	97	60.200	ENSSPAG00000000377	atxn2	96	60.668	Stegastes_partitus
ENSLACG00000012531	ATXN2	99	74.631	ENSSSCG00000009834	ATXN2	94	74.609	Sus_scrofa
ENSLACG00000012531	ATXN2	99	60.105	ENSTRUG00000016801	atxn2	100	59.620	Takifugu_rubripes
ENSLACG00000012531	ATXN2	87	84.615	ENSTBEG00000001985	ATXN2	89	84.615	Tupaia_belangeri
ENSLACG00000012531	ATXN2	89	77.005	ENSTTRG00000000952	ATXN2	76	76.855	Tursiops_truncatus
ENSLACG00000012531	ATXN2	99	74.561	ENSUAMG00000025295	ATXN2	94	74.425	Ursus_americanus
ENSLACG00000012531	ATXN2	98	74.366	ENSUMAG00000007315	ATXN2	100	74.272	Ursus_maritimus
ENSLACG00000012531	ATXN2	93	76.562	ENSVPAG00000005940	ATXN2	94	77.465	Vicugna_pacos
ENSLACG00000012531	ATXN2	98	74.366	ENSVVUG00000016107	ATXN2	100	74.272	Vulpes_vulpes
ENSLACG00000012531	ATXN2	99	69.972	ENSXETG00000020912	atxn2	100	69.231	Xenopus_tropicalis
ENSLACG00000012531	ATXN2	56	55.502	ENSXCOG00000010001	atxn2	99	57.711	Xiphophorus_couchianus