EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000012567 (Gene tree)
Gene ID: -
Gene Symbol: POLR1C
Alias: RPA39|RPA40|RPA5|RPAC1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 18816 bases
Position: chrJH127385.1:736517-755332
Accession: 20194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014280	RNA_pol_A_bac	PF01000.26	4.9e-28	1	1
ENSLACP00000014280	RNA_pol_L	PF01193.24	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014380	POLR1C-201	993	-	ENSLACP00000014280	330 (aa)	-	H3AXA9

Gene Model

Click here to download ENSLACG00000012567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012567	POLR1C	98	63.253	ENSG00000171453	POLR1C	97	70.732	Homo_sapiens
ENSLACG00000012567	POLR1C	98	58.036	ENSAPOG00000024356	polr1c	95	58.631	Acanthochromis_polyacanthus
ENSLACG00000012567	POLR1C	98	63.554	ENSAMEG00000012205	POLR1C	94	63.554	Ailuropoda_melanoleuca
ENSLACG00000012567	POLR1C	74	62.109	ENSACIG00000016268	polr1c	78	62.891	Amphilophus_citrinellus
ENSLACG00000012567	POLR1C	98	56.548	ENSAOCG00000011687	polr1c	92	57.143	Amphiprion_ocellaris
ENSLACG00000012567	POLR1C	98	57.440	ENSAPEG00000002433	polr1c	95	58.036	Amphiprion_percula
ENSLACG00000012567	POLR1C	96	60.923	ENSATEG00000005985	polr1c	93	60.923	Anabas_testudineus
ENSLACG00000012567	POLR1C	85	64.828	ENSAPLG00000002908	POLR1C	95	64.828	Anas_platyrhynchos
ENSLACG00000012567	POLR1C	86	57.338	ENSACAG00000009764	POLR1C	82	57.338	Anolis_carolinensis
ENSLACG00000012567	POLR1C	98	63.253	ENSANAG00000025805	POLR1C	94	63.253	Aotus_nancymaae
ENSLACG00000012567	POLR1C	98	58.806	ENSACLG00000006573	polr1c	95	59.403	Astatotilapia_calliptera
ENSLACG00000012567	POLR1C	98	58.308	ENSAMXG00000012062	polr1c	94	58.308	Astyanax_mexicanus
ENSLACG00000012567	POLR1C	98	63.554	ENSBTAG00000018969	POLR1C	95	63.554	Bos_taurus
ENSLACG00000012567	POLR1C	78	39.711	WBGene00019275	rpac-40	76	39.711	Caenorhabditis_elegans
ENSLACG00000012567	POLR1C	98	63.253	ENSCJAG00000005594	POLR1C	95	63.253	Callithrix_jacchus
ENSLACG00000012567	POLR1C	98	62.651	ENSCAFG00000001872	POLR1C	95	62.651	Canis_familiaris
ENSLACG00000012567	POLR1C	98	62.651	ENSCAFG00020012018	POLR1C	95	62.651	Canis_lupus_dingo
ENSLACG00000012567	POLR1C	98	63.063	ENSCHIG00000004352	POLR1C	95	63.063	Capra_hircus
ENSLACG00000012567	POLR1C	98	63.554	ENSTSYG00000011921	POLR1C	95	63.554	Carlito_syrichta
ENSLACG00000012567	POLR1C	86	64.605	ENSCAPG00000015364	POLR1C	84	64.605	Cavia_aperea
ENSLACG00000012567	POLR1C	98	62.840	ENSCPOG00000038098	POLR1C	95	62.840	Cavia_porcellus
ENSLACG00000012567	POLR1C	98	63.855	ENSCCAG00000020169	POLR1C	95	63.855	Cebus_capucinus
ENSLACG00000012567	POLR1C	98	63.253	ENSCATG00000044045	POLR1C	95	63.253	Cercocebus_atys
ENSLACG00000012567	POLR1C	98	63.253	ENSCLAG00000009266	POLR1C	95	63.253	Chinchilla_lanigera
ENSLACG00000012567	POLR1C	98	62.651	ENSCSAG00000011913	POLR1C	95	62.651	Chlorocebus_sabaeus
ENSLACG00000012567	POLR1C	62	62.441	ENSCHOG00000006601	POLR1C	100	62.441	Choloepus_hoffmanni
ENSLACG00000012567	POLR1C	98	62.048	ENSCPBG00000025203	POLR1C	95	62.048	Chrysemys_picta_bellii
ENSLACG00000012567	POLR1C	95	44.000	ENSCING00000003563	-	92	44.000	Ciona_intestinalis
ENSLACG00000012567	POLR1C	98	63.253	ENSCANG00000043167	POLR1C	95	63.253	Colobus_angolensis_palliatus
ENSLACG00000012567	POLR1C	98	61.145	ENSCGRG00001017533	Polr1c	95	61.145	Cricetulus_griseus_chok1gshd
ENSLACG00000012567	POLR1C	86	62.887	ENSCGRG00000013225	Polr1c	96	62.887	Cricetulus_griseus_crigri
ENSLACG00000012567	POLR1C	98	58.735	ENSCSEG00000018097	polr1c	95	58.735	Cynoglossus_semilaevis
ENSLACG00000012567	POLR1C	62	59.624	ENSCVAG00000005684	polr1c	88	59.276	Cyprinodon_variegatus
ENSLACG00000012567	POLR1C	98	59.517	ENSDARG00000039400	polr1c	91	59.517	Danio_rerio
ENSLACG00000012567	POLR1C	98	62.952	ENSDNOG00000042693	POLR1C	95	62.952	Dasypus_novemcinctus
ENSLACG00000012567	POLR1C	96	63.303	ENSDORG00000000429	Polr1c	93	63.303	Dipodomys_ordii
ENSLACG00000012567	POLR1C	97	41.411	FBgn0031657	CG3756	97	41.411	Drosophila_melanogaster
ENSLACG00000012567	POLR1C	98	60.180	ENSETEG00000010807	POLR1C	95	60.180	Echinops_telfairi
ENSLACG00000012567	POLR1C	96	57.492	ENSEBUG00000013725	polr1c	93	57.492	Eptatretus_burgeri
ENSLACG00000012567	POLR1C	98	62.952	ENSEASG00005003338	POLR1C	95	62.952	Equus_asinus_asinus
ENSLACG00000012567	POLR1C	98	62.651	ENSECAG00000023516	POLR1C	93	62.651	Equus_caballus
ENSLACG00000012567	POLR1C	98	62.952	ENSEEUG00000005471	POLR1C	95	62.952	Erinaceus_europaeus
ENSLACG00000012567	POLR1C	98	58.610	ENSELUG00000013027	polr1c	95	58.610	Esox_lucius
ENSLACG00000012567	POLR1C	98	62.952	ENSFCAG00000009735	POLR1C	95	62.952	Felis_catus
ENSLACG00000012567	POLR1C	96	62.691	ENSFALG00000012111	POLR1C	100	62.691	Ficedula_albicollis
ENSLACG00000012567	POLR1C	98	63.063	ENSFDAG00000008428	POLR1C	95	63.063	Fukomys_damarensis
ENSLACG00000012567	POLR1C	98	56.481	ENSFHEG00000000262	polr1c	94	56.481	Fundulus_heteroclitus
ENSLACG00000012567	POLR1C	96	58.308	ENSGMOG00000013878	polr1c	100	58.308	Gadus_morhua
ENSLACG00000012567	POLR1C	98	63.746	ENSGALG00000010349	POLR1C	95	63.746	Gallus_gallus
ENSLACG00000012567	POLR1C	98	58.929	ENSGAFG00000010153	polr1c	95	59.226	Gambusia_affinis
ENSLACG00000012567	POLR1C	97	57.357	ENSGACG00000002453	polr1c	93	58.610	Gasterosteus_aculeatus
ENSLACG00000012567	POLR1C	96	62.691	ENSGAGG00000010640	POLR1C	93	62.691	Gopherus_agassizii
ENSLACG00000012567	POLR1C	98	63.253	ENSGGOG00000010903	POLR1C	95	63.253	Gorilla_gorilla
ENSLACG00000012567	POLR1C	98	57.910	ENSHBUG00000017816	polr1c	94	57.910	Haplochromis_burtoni
ENSLACG00000012567	POLR1C	98	63.063	ENSHGLG00000019441	POLR1C	100	68.321	Heterocephalus_glaber_female
ENSLACG00000012567	POLR1C	98	63.063	ENSHGLG00100005970	POLR1C	100	68.321	Heterocephalus_glaber_male
ENSLACG00000012567	POLR1C	96	56.364	ENSHCOG00000002179	polr1c	93	56.364	Hippocampus_comes
ENSLACG00000012567	POLR1C	97	59.146	ENSIPUG00000024464	polr1c	93	59.146	Ictalurus_punctatus
ENSLACG00000012567	POLR1C	98	62.952	ENSSTOG00000010631	POLR1C	95	62.952	Ictidomys_tridecemlineatus
ENSLACG00000012567	POLR1C	98	62.952	ENSJJAG00000023110	Polr1c	95	62.952	Jaculus_jaculus
ENSLACG00000012567	POLR1C	98	57.143	ENSKMAG00000014305	polr1c	94	55.864	Kryptolebias_marmoratus
ENSLACG00000012567	POLR1C	96	57.402	ENSLBEG00000014925	polr1c	93	58.006	Labrus_bergylta
ENSLACG00000012567	POLR1C	96	59.633	ENSLOCG00000016710	polr1c	89	59.633	Lepisosteus_oculatus
ENSLACG00000012567	POLR1C	86	63.918	ENSLAFG00000026248	POLR1C	96	63.918	Loxodonta_africana
ENSLACG00000012567	POLR1C	98	62.952	ENSMFAG00000046295	POLR1C	95	62.952	Macaca_fascicularis
ENSLACG00000012567	POLR1C	98	62.952	ENSMMUG00000015192	POLR1C	95	62.952	Macaca_mulatta
ENSLACG00000012567	POLR1C	98	62.952	ENSMNEG00000028073	POLR1C	95	62.952	Macaca_nemestrina
ENSLACG00000012567	POLR1C	98	63.253	ENSMLEG00000034818	POLR1C	95	63.253	Mandrillus_leucophaeus
ENSLACG00000012567	POLR1C	98	59.226	ENSMAMG00000008700	polr1c	95	59.226	Mastacembelus_armatus
ENSLACG00000012567	POLR1C	98	58.507	ENSMZEG00005018545	polr1c	95	59.104	Maylandia_zebra
ENSLACG00000012567	POLR1C	78	68.539	ENSMGAG00000011020	POLR1C	93	68.539	Meleagris_gallopavo
ENSLACG00000012567	POLR1C	98	61.747	ENSMAUG00000014329	Polr1c	95	61.747	Mesocricetus_auratus
ENSLACG00000012567	POLR1C	98	63.253	ENSMICG00000005027	POLR1C	95	63.253	Microcebus_murinus
ENSLACG00000012567	POLR1C	98	61.747	ENSMOCG00000017549	Polr1c	95	61.747	Microtus_ochrogaster
ENSLACG00000012567	POLR1C	98	53.988	ENSMMOG00000005380	polr1c	94	53.988	Mola_mola
ENSLACG00000012567	POLR1C	86	65.636	ENSMODG00000018964	POLR1C	99	65.636	Monodelphis_domestica
ENSLACG00000012567	POLR1C	98	57.716	ENSMALG00000011711	polr1c	94	57.716	Monopterus_albus
ENSLACG00000012567	POLR1C	98	59.697	MGP_CAROLIEiJ_G0021662	Polr1c	100	67.050	Mus_caroli
ENSLACG00000012567	POLR1C	98	61.446	ENSMUSG00000067148	Polr1c	100	66.667	Mus_musculus
ENSLACG00000012567	POLR1C	98	61.747	MGP_PahariEiJ_G0020654	Polr1c	100	67.050	Mus_pahari
ENSLACG00000012567	POLR1C	98	61.446	MGP_SPRETEiJ_G0022574	Polr1c	100	66.667	Mus_spretus
ENSLACG00000012567	POLR1C	98	63.253	ENSMPUG00000012916	POLR1C	86	63.253	Mustela_putorius_furo
ENSLACG00000012567	POLR1C	98	62.651	ENSMLUG00000017751	POLR1C	95	62.651	Myotis_lucifugus
ENSLACG00000012567	POLR1C	98	62.048	ENSNGAG00000023487	Polr1c	99	63.918	Nannospalax_galili
ENSLACG00000012567	POLR1C	98	58.806	ENSNBRG00000018742	polr1c	95	59.403	Neolamprologus_brichardi
ENSLACG00000012567	POLR1C	98	63.939	ENSNLEG00000004035	POLR1C	95	63.554	Nomascus_leucogenys
ENSLACG00000012567	POLR1C	98	59.215	ENSMEUG00000006778	POLR1C	95	59.215	Notamacropus_eugenii
ENSLACG00000012567	POLR1C	74	59.449	ENSOPRG00000000145	POLR1C	93	59.449	Ochotona_princeps
ENSLACG00000012567	POLR1C	98	62.952	ENSODEG00000015831	-	95	62.952	Octodon_degus
ENSLACG00000012567	POLR1C	64	65.455	ENSODEG00000017109	-	100	65.455	Octodon_degus
ENSLACG00000012567	POLR1C	98	59.104	ENSONIG00000013133	polr1c	93	59.701	Oreochromis_niloticus
ENSLACG00000012567	POLR1C	98	61.446	ENSOANG00000003043	POLR1C	95	61.446	Ornithorhynchus_anatinus
ENSLACG00000012567	POLR1C	98	63.253	ENSOCUG00000005504	POLR1C	95	63.253	Oryctolagus_cuniculus
ENSLACG00000012567	POLR1C	95	56.347	ENSORLG00000019743	polr1c	93	56.347	Oryzias_latipes
ENSLACG00000012567	POLR1C	96	55.927	ENSORLG00020006489	POLR1C	93	55.927	Oryzias_latipes_hni
ENSLACG00000012567	POLR1C	66	49.782	ENSORLG00020005555	polr1c	68	49.782	Oryzias_latipes_hni
ENSLACG00000012567	POLR1C	96	55.623	ENSORLG00015013322	polr1c	93	55.623	Oryzias_latipes_hsok
ENSLACG00000012567	POLR1C	96	56.364	ENSOMEG00000016527	polr1c	93	56.364	Oryzias_melastigma
ENSLACG00000012567	POLR1C	98	62.575	ENSOGAG00000016318	POLR1C	95	62.575	Otolemur_garnettii
ENSLACG00000012567	POLR1C	98	63.253	ENSOARG00000007503	POLR1C	95	63.253	Ovis_aries
ENSLACG00000012567	POLR1C	98	63.253	ENSPPAG00000043678	POLR1C	95	63.253	Pan_paniscus
ENSLACG00000012567	POLR1C	98	63.253	ENSPPRG00000009760	POLR1C	95	63.253	Panthera_pardus
ENSLACG00000012567	POLR1C	98	63.253	ENSPTIG00000014813	POLR1C	95	63.253	Panthera_tigris_altaica
ENSLACG00000012567	POLR1C	98	63.253	ENSPTRG00000018202	POLR1C	95	63.253	Pan_troglodytes
ENSLACG00000012567	POLR1C	98	63.253	ENSPANG00000009025	POLR1C	94	63.253	Papio_anubis
ENSLACG00000012567	POLR1C	98	58.735	ENSPKIG00000009858	polr1c	95	58.735	Paramormyrops_kingsleyae
ENSLACG00000012567	POLR1C	96	62.691	ENSPSIG00000012580	POLR1C	88	62.691	Pelodiscus_sinensis
ENSLACG00000012567	POLR1C	98	56.173	ENSPMGG00000012121	polr1c	94	56.173	Periophthalmus_magnuspinnatus
ENSLACG00000012567	POLR1C	98	61.446	ENSPEMG00000006970	Polr1c	95	61.446	Peromyscus_maniculatus_bairdii
ENSLACG00000012567	POLR1C	95	58.359	ENSPMAG00000005560	polr1c	92	58.359	Petromyzon_marinus
ENSLACG00000012567	POLR1C	98	64.157	ENSPCIG00000028137	POLR1C	93	64.157	Phascolarctos_cinereus
ENSLACG00000012567	POLR1C	98	59.226	ENSPFOG00000014342	POLR1C	95	59.524	Poecilia_formosa
ENSLACG00000012567	POLR1C	98	59.226	ENSPFOG00000014357	polr1c	93	59.524	Poecilia_formosa
ENSLACG00000012567	POLR1C	70	57.500	ENSPLAG00000004111	polr1c	99	57.500	Poecilia_latipinna
ENSLACG00000012567	POLR1C	98	59.226	ENSPMEG00000008420	polr1c	95	59.524	Poecilia_mexicana
ENSLACG00000012567	POLR1C	98	59.226	ENSPMEG00000011877	-	95	59.524	Poecilia_mexicana
ENSLACG00000012567	POLR1C	98	59.940	ENSPREG00000007985	polr1c	95	59.940	Poecilia_reticulata
ENSLACG00000012567	POLR1C	98	63.253	ENSPPYG00000016645	POLR1C	95	63.914	Pongo_abelii
ENSLACG00000012567	POLR1C	98	63.253	ENSPCOG00000024628	POLR1C	95	63.253	Propithecus_coquereli
ENSLACG00000012567	POLR1C	98	55.120	ENSPVAG00000005689	POLR1C	95	55.120	Pteropus_vampyrus
ENSLACG00000012567	POLR1C	98	59.281	ENSPNYG00000003620	polr1c	95	59.403	Pundamilia_nyererei
ENSLACG00000012567	POLR1C	98	60.121	ENSPNAG00000008443	polr1c	95	60.121	Pygocentrus_nattereri
ENSLACG00000012567	POLR1C	98	61.446	ENSRNOG00000019079	Polr1c	100	66.284	Rattus_norvegicus
ENSLACG00000012567	POLR1C	98	63.855	ENSRBIG00000007155	POLR1C	95	63.855	Rhinopithecus_bieti
ENSLACG00000012567	POLR1C	98	63.554	ENSRROG00000000257	POLR1C	95	63.554	Rhinopithecus_roxellana
ENSLACG00000012567	POLR1C	94	37.963	YPR110C	RPC40	95	37.963	Saccharomyces_cerevisiae
ENSLACG00000012567	POLR1C	98	63.554	ENSSBOG00000025735	POLR1C	93	62.799	Saimiri_boliviensis_boliviensis
ENSLACG00000012567	POLR1C	98	62.727	ENSSHAG00000014456	POLR1C	95	62.727	Sarcophilus_harrisii
ENSLACG00000012567	POLR1C	98	60.542	ENSSFOG00015019860	polr1c	95	60.542	Scleropages_formosus
ENSLACG00000012567	POLR1C	98	58.735	ENSSMAG00000018865	polr1c	94	58.735	Scophthalmus_maximus
ENSLACG00000012567	POLR1C	98	59.524	ENSSDUG00000015745	polr1c	94	58.333	Seriola_dumerili
ENSLACG00000012567	POLR1C	98	59.226	ENSSLDG00000018285	polr1c	94	58.025	Seriola_lalandi_dorsalis
ENSLACG00000012567	POLR1C	97	58.967	ENSSPUG00000011822	POLR1C	94	58.967	Sphenodon_punctatus
ENSLACG00000012567	POLR1C	98	58.333	ENSSPAG00000022369	polr1c	95	58.929	Stegastes_partitus
ENSLACG00000012567	POLR1C	98	62.651	ENSSSCG00000028007	POLR1C	93	64.605	Sus_scrofa
ENSLACG00000012567	POLR1C	98	61.934	ENSTGUG00000009159	POLR1C	97	61.934	Taeniopygia_guttata
ENSLACG00000012567	POLR1C	98	58.036	ENSTRUG00000006264	polr1c	95	58.036	Takifugu_rubripes
ENSLACG00000012567	POLR1C	52	62.011	ENSTBEG00000002254	POLR1C	100	62.011	Tupaia_belangeri
ENSLACG00000012567	POLR1C	78	67.557	ENSTTRG00000006344	POLR1C	76	67.557	Tursiops_truncatus
ENSLACG00000012567	POLR1C	98	63.554	ENSUAMG00000025602	POLR1C	95	63.554	Ursus_americanus
ENSLACG00000012567	POLR1C	98	63.554	ENSUMAG00000005938	POLR1C	95	63.554	Ursus_maritimus
ENSLACG00000012567	POLR1C	98	60.185	ENSVVUG00000028922	POLR1C	95	59.697	Vulpes_vulpes
ENSLACG00000012567	POLR1C	98	57.357	ENSXETG00000010882	polr1c	95	57.357	Xenopus_tropicalis
ENSLACG00000012567	POLR1C	98	59.760	ENSXCOG00000014185	polr1c	95	59.760	Xiphophorus_couchianus
ENSLACG00000012567	POLR1C	98	59.226	ENSXMAG00000015076	polr1c	95	59.524	Xiphophorus_maculatus