EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000012598 (Gene tree)
Gene ID: -
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 92406 bases
Position: chrJH126867.1:739323-831728
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014315	ResIII	PF04851.15	1.9e-07	1	1
ENSLACP00000014314	ResIII	PF04851.15	2.2e-07	1	1
ENSLACP00000014313	ResIII	PF04851.15	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014414	SBNO2-202	2604	-	ENSLACP00000014314	552 (aa)	-	H3AXE3
ENSLACT00000014415	SBNO2-203	1961	-	ENSLACP00000014315	605 (aa)	-	H3AXE4
ENSLACT00000014413	SBNO2-201	2644	-	ENSLACP00000014313	681 (aa)	-	H3AXE2

Gene Model

Click here to download ENSLACG00000012598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012598	SBNO2	96	75.430	ENSG00000064932	SBNO2	50	72.239	Homo_sapiens
ENSLACG00000012598	SBNO2	100	70.806	ENSAOCG00000016581	si:ch73-63e15.2	67	66.858	Amphiprion_ocellaris
ENSLACG00000012598	SBNO2	100	71.244	ENSATEG00000023838	si:ch73-63e15.2	63	69.265	Anabas_testudineus
ENSLACG00000012598	SBNO2	97	79.229	ENSAPLG00000007158	SBNO2	52	74.446	Anas_platyrhynchos
ENSLACG00000012598	SBNO2	77	86.047	ENSACAG00000006370	-	96	86.047	Anolis_carolinensis
ENSLACG00000012598	SBNO2	95	76.181	ENSANAG00000026685	SBNO2	50	72.824	Aotus_nancymaae
ENSLACG00000012598	SBNO2	97	70.627	ENSAMXG00000018868	sbno2a	61	70.016	Astyanax_mexicanus
ENSLACG00000012598	SBNO2	100	73.970	ENSBTAG00000020780	SBNO2	50	72.247	Bos_taurus
ENSLACG00000012598	SBNO2	99	73.636	ENSCAFG00020017115	SBNO2	52	69.971	Canis_lupus_dingo
ENSLACG00000012598	SBNO2	99	74.088	ENSCHIG00000026127	SBNO2	50	70.760	Capra_hircus
ENSLACG00000012598	SBNO2	99	73.188	ENSCAPG00000005731	SBNO2	55	68.705	Cavia_aperea
ENSLACG00000012598	SBNO2	99	73.188	ENSCPOG00000007477	SBNO2	50	68.705	Cavia_porcellus
ENSLACG00000012598	SBNO2	93	76.893	ENSCCAG00000037518	SBNO2	51	72.097	Cebus_capucinus
ENSLACG00000012598	SBNO2	100	73.071	ENSCATG00000037046	SBNO2	50	72.239	Cercocebus_atys
ENSLACG00000012598	SBNO2	99	73.719	ENSCLAG00000010178	SBNO2	57	70.677	Chinchilla_lanigera
ENSLACG00000012598	SBNO2	100	76.596	ENSCPBG00000008920	SBNO2	57	76.492	Chrysemys_picta_bellii
ENSLACG00000012598	SBNO2	100	73.071	ENSCANG00000036745	SBNO2	58	71.704	Colobus_angolensis_palliatus
ENSLACG00000012598	SBNO2	97	74.746	ENSCGRG00001023960	Sbno2	50	69.572	Cricetulus_griseus_chok1gshd
ENSLACG00000012598	SBNO2	98	67.219	ENSCSEG00000006856	si:ch73-63e15.2	52	64.126	Cynoglossus_semilaevis
ENSLACG00000012598	SBNO2	99	74.135	ENSEASG00005021621	SBNO2	50	72.356	Equus_asinus_asinus
ENSLACG00000012598	SBNO2	99	74.135	ENSECAG00000011827	SBNO2	50	72.356	Equus_caballus
ENSLACG00000012598	SBNO2	100	76.106	ENSFALG00000013988	SBNO2	51	72.277	Ficedula_albicollis
ENSLACG00000012598	SBNO2	99	72.351	ENSFDAG00000015186	SBNO2	51	69.208	Fukomys_damarensis
ENSLACG00000012598	SBNO2	96	72.355	ENSGMOG00000007542	si:ch73-63e15.2	53	68.902	Gadus_morhua
ENSLACG00000012598	SBNO2	99	72.744	ENSGAFG00000004860	si:ch73-63e15.2	51	68.127	Gambusia_affinis
ENSLACG00000012598	SBNO2	97	73.480	ENSGACG00000013190	si:ch73-63e15.2	54	69.848	Gasterosteus_aculeatus
ENSLACG00000012598	SBNO2	100	77.977	ENSGAGG00000008348	SBNO2	50	74.556	Gopherus_agassizii
ENSLACG00000012598	SBNO2	100	72.862	ENSHGLG00100005269	SBNO2	57	69.747	Heterocephalus_glaber_male
ENSLACG00000012598	SBNO2	99	70.549	ENSIPUG00000019672	sbno2	54	77.076	Ictalurus_punctatus
ENSLACG00000012598	SBNO2	95	69.697	ENSLBEG00000005937	-	99	67.678	Labrus_bergylta
ENSLACG00000012598	SBNO2	100	70.654	ENSLBEG00000025016	si:ch73-63e15.2	64	69.231	Labrus_bergylta
ENSLACG00000012598	SBNO2	94	76.182	ENSLAFG00000008824	SBNO2	52	72.435	Loxodonta_africana
ENSLACG00000012598	SBNO2	100	70.656	ENSMFAG00000040030	SBNO2	52	69.598	Macaca_fascicularis
ENSLACG00000012598	SBNO2	97	75.169	ENSMMUG00000010886	SBNO2	51	69.391	Macaca_mulatta
ENSLACG00000012598	SBNO2	100	73.235	ENSMNEG00000039927	SBNO2	51	72.388	Macaca_nemestrina
ENSLACG00000012598	SBNO2	97	75.169	ENSMLEG00000038556	SBNO2	56	72.646	Mandrillus_leucophaeus
ENSLACG00000012598	SBNO2	100	75.201	ENSMGAG00000003801	SBNO2	52	72.969	Meleagris_gallopavo
ENSLACG00000012598	SBNO2	99	73.827	ENSMAUG00000008034	Sbno2	50	68.931	Mesocricetus_auratus
ENSLACG00000012598	SBNO2	99	74.595	ENSMICG00000013071	SBNO2	50	72.741	Microcebus_murinus
ENSLACG00000012598	SBNO2	99	72.924	ENSMOCG00000010504	Sbno2	50	67.919	Microtus_ochrogaster
ENSLACG00000012598	SBNO2	97	63.912	ENSMALG00000021831	si:ch73-63e15.2	62	60.606	Monopterus_albus
ENSLACG00000012598	SBNO2	99	73.237	ENSMUSG00000035673	Sbno2	96	63.800	Mus_musculus
ENSLACG00000012598	SBNO2	99	73.599	MGP_PahariEiJ_G0030976	Sbno2	50	68.886	Mus_pahari
ENSLACG00000012598	SBNO2	99	73.599	MGP_SPRETEiJ_G0016381	Sbno2	53	68.886	Mus_spretus
ENSLACG00000012598	SBNO2	97	74.237	ENSMPUG00000008747	SBNO2	61	70.414	Mustela_putorius_furo
ENSLACG00000012598	SBNO2	97	72.941	ENSNGAG00000004308	Sbno2	50	68.991	Nannospalax_galili
ENSLACG00000012598	SBNO2	97	70.805	ENSNBRG00000022968	si:ch73-63e15.2	61	75.993	Neolamprologus_brichardi
ENSLACG00000012598	SBNO2	98	68.167	ENSNLEG00000001305	SBNO2	53	64.497	Nomascus_leucogenys
ENSLACG00000012598	SBNO2	95	72.368	ENSOPRG00000017238	SBNO2	53	69.834	Ochotona_princeps
ENSLACG00000012598	SBNO2	96	73.171	ENSODEG00000011822	SBNO2	50	66.423	Octodon_degus
ENSLACG00000012598	SBNO2	97	71.595	ENSONIG00000002490	si:ch73-63e15.2	52	68.843	Oreochromis_niloticus
ENSLACG00000012598	SBNO2	97	73.051	ENSOARG00000011130	SBNO2	50	68.955	Ovis_aries
ENSLACG00000012598	SBNO2	96	75.258	ENSPPAG00000032482	SBNO2	51	71.940	Pan_paniscus
ENSLACG00000012598	SBNO2	96	75.258	ENSPTRG00000010185	SBNO2	51	72.090	Pan_troglodytes
ENSLACG00000012598	SBNO2	97	79.132	ENSPSIG00000002852	SBNO2	68	74.332	Pelodiscus_sinensis
ENSLACG00000012598	SBNO2	99	73.105	ENSPFOG00000004096	si:ch73-63e15.2	58	66.715	Poecilia_formosa
ENSLACG00000012598	SBNO2	99	73.105	ENSPMEG00000002129	si:ch73-63e15.2	62	67.625	Poecilia_mexicana
ENSLACG00000012598	SBNO2	98	67.002	ENSPCOG00000015216	SBNO2	51	63.609	Propithecus_coquereli
ENSLACG00000012598	SBNO2	98	71.481	ENSPNAG00000026609	sbno2a	56	75.993	Pygocentrus_nattereri
ENSLACG00000012598	SBNO2	99	73.285	ENSRNOG00000013987	Sbno2	51	69.985	Rattus_norvegicus
ENSLACG00000012598	SBNO2	100	70.704	ENSRBIG00000009740	SBNO2	53	70.197	Rhinopithecus_bieti
ENSLACG00000012598	SBNO2	100	73.892	ENSRROG00000044671	SBNO2	55	73.002	Rhinopithecus_roxellana
ENSLACG00000012598	SBNO2	98	73.122	ENSSBOG00000023562	SBNO2	51	72.398	Saimiri_boliviensis_boliviensis
ENSLACG00000012598	SBNO2	95	77.841	ENSSHAG00000010241	SBNO2	57	73.795	Sarcophilus_harrisii
ENSLACG00000012598	SBNO2	100	68.679	ENSSFOG00015005861	si:ch73-63e15.2	50	69.608	Scleropages_formosus
ENSLACG00000012598	SBNO2	100	74.135	ENSSSCG00000030042	SBNO2	51	72.659	Sus_scrofa
ENSLACG00000012598	SBNO2	99	69.243	ENSTRUG00000018193	si:ch73-63e15.2	50	68.326	Takifugu_rubripes
ENSLACG00000012598	SBNO2	85	76.550	ENSTNIG00000000856	si:ch73-63e15.2	98	77.519	Tetraodon_nigroviridis
ENSLACG00000012598	SBNO2	99	73.636	ENSUAMG00000006568	SBNO2	87	67.852	Ursus_americanus
ENSLACG00000012598	SBNO2	99	71.173	ENSXCOG00000009209	si:ch73-63e15.2	52	78.058	Xiphophorus_couchianus