EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012755 (Gene tree)
Gene ID: 102349001
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 6615 bases
Position: chrJH126714.1:760273-766887
Accession: 102349001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014495	MMR_HSR1	PF01926.23	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014595	-	1082	XM_005993125	ENSLACP00000014495	212 (aa)	XP_005993187	H3AXX4

Gene Model

Click here to download ENSLACG00000012755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012755	-	77	42.945	ENSLACG00000016974	RAB11B	94	42.945
ENSLACG00000012755	-	77	33.735	ENSLACG00000017799	RAB36	62	33.735
ENSLACG00000012755	-	75	45.000	ENSLACG00000006407	RAB30	78	45.000
ENSLACG00000012755	-	98	38.318	ENSLACG00000011181	RAB14	97	38.318
ENSLACG00000012755	-	74	35.256	ENSLACG00000004025	RAB23	70	34.524
ENSLACG00000012755	-	74	39.752	ENSLACG00000017891	RAB9B	74	40.000
ENSLACG00000012755	-	78	33.136	ENSLACG00000002523	RAB29	82	33.136
ENSLACG00000012755	-	100	55.399	ENSLACG00000016074	RAB39B	100	55.399
ENSLACG00000012755	-	71	37.500	ENSLACG00000010042	-	87	35.519
ENSLACG00000012755	-	90	36.923	ENSLACG00000011557	zgc:101559	84	36.923
ENSLACG00000012755	-	97	38.350	ENSLACG00000012184	RAB11A	95	38.350
ENSLACG00000012755	-	75	34.118	ENSLACG00000014614	si:dkey-27j5.5	61	32.941
ENSLACG00000012755	-	75	31.250	ENSLACG00000003581	rasd3	75	31.250
ENSLACG00000012755	-	84	41.899	ENSLACG00000012717	RAB1B	88	41.899
ENSLACG00000012755	-	81	37.143	ENSLACG00000008103	-	95	37.143
ENSLACG00000012755	-	77	34.940	ENSLACG00000001081	RAB34	64	34.940
ENSLACG00000012755	-	80	39.645	ENSLACG00000011157	RAB25	78	39.645
ENSLACG00000012755	-	75	33.129	ENSLACG00000015770	RAB7A	78	33.129
ENSLACG00000012755	-	80	33.140	ENSLACG00000017464	KRAS	96	32.432
ENSLACG00000012755	-	97	37.019	ENSLACG00000010461	RAB12	82	36.538
ENSLACG00000012755	-	78	41.212	ENSLACG00000009310	rab18a	79	41.212
ENSLACG00000012755	-	93	40.404	ENSLACG00000012869	RAB1A	95	40.404
ENSLACG00000012755	-	68	37.500	ENSLACG00000014985	RAP2B	85	36.943
ENSLACG00000012755	-	60	35.156	ENSLACG00000010885	-	83	35.156
ENSLACG00000012755	-	77	40.491	ENSLACG00000022111	-	81	40.491
ENSLACG00000012755	-	89	38.542	ENSLACG00000013571	RAB33B	73	41.176
ENSLACG00000012755	-	90	42.105	ENSLACG00000012521	RAB2A	89	42.105
ENSLACG00000012755	-	98	37.143	ENSLACG00000011380	rab11al	95	37.143
ENSLACG00000012755	-	57	30.000	ENSLACG00000018793	RAN	80	30.000
ENSLACG00000012755	-	91	31.771	ENSLACG00000018427	HRAS	97	31.220
ENSLACG00000012755	-	71	33.113	ENSLACG00000018428	NRAS	85	32.317
ENSLACG00000012755	-	71	32.450	ENSLACG00000017138	RRAS	94	31.928
ENSLACG00000012755	-	74	42.038	ENSLACG00000005168	RAB6A	75	42.038
ENSLACG00000012755	-	81	30.233	ENSLACG00000001282	-	82	30.233
ENSLACG00000012755	-	74	43.312	ENSLACG00000013980	rab41	73	43.312
ENSLACG00000012755	-	82	38.728	ENSLACG00000011256	rab18b	83	38.728
ENSLACG00000012755	-	98	37.915	ENSLACG00000016857	-	95	37.915
ENSLACG00000012755	-	80	33.529	ENSLACG00000016958	-	81	33.529
ENSLACG00000012755	-	100	56.808	ENSLACG00000002332	-	100	56.808
ENSLACG00000012755	-	75	33.951	ENSLACG00000008809	zgc:100918	78	33.951
ENSLACG00000012755	-	58	30.645	ENSLACG00000016598	arl3l1	58	31.148
ENSLACG00000012755	-	74	38.217	ENSLACG00000004663	RAB5A	72	38.217
ENSLACG00000012755	-	74	45.860	ENSLACG00000014446	RAB2B	94	45.860
ENSLACG00000012755	-	54	46.491	ENSLACG00000018444	RAB35	56	46.491
ENSLACG00000012755	-	81	36.000	ENSLACG00000007092	RAB22A	89	36.000
ENSLACG00000012755	-	100	58.333	ENSLACG00000012674	si:dkey-34d22.5	100	58.333
ENSLACG00000012755	-	80	36.471	ENSLACG00000012088	rheb	90	36.471
ENSLACG00000012755	-	78	36.145	ENSLACG00000013122	RRAS2	81	36.145
ENSLACG00000012755	-	83	31.638	ENSLACG00000003722	rabl2	74	31.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012755	-	94	68.500	ENSAPOG00000009188	rab42a	100	65.138	Acanthochromis_polyacanthus
ENSLACG00000012755	-	95	68.657	ENSACIG00000003102	rab42a	100	65.138	Amphilophus_citrinellus
ENSLACG00000012755	-	94	68.000	ENSAOCG00000012921	rab42a	83	63.761	Amphiprion_ocellaris
ENSLACG00000012755	-	94	68.000	ENSAPEG00000007713	rab42a	83	63.761	Amphiprion_percula
ENSLACG00000012755	-	100	64.220	ENSATEG00000009052	rab42a	100	64.220	Anabas_testudineus
ENSLACG00000012755	-	100	64.055	ENSACLG00000007514	rab42a	100	64.055	Astatotilapia_calliptera
ENSLACG00000012755	-	100	65.728	ENSAMXG00000032729	rab42a	100	65.728	Astyanax_mexicanus
ENSLACG00000012755	-	100	64.220	ENSCSEG00000010582	rab42a	100	64.220	Cynoglossus_semilaevis
ENSLACG00000012755	-	100	64.789	ENSDARG00000034215	rab42a	100	64.789	Danio_rerio
ENSLACG00000012755	-	100	48.357	ENSDARG00000102580	CU571310.1	99	48.357	Danio_rerio
ENSLACG00000012755	-	100	62.963	ENSELUG00000010345	rab42a	100	62.963	Esox_lucius
ENSLACG00000012755	-	100	64.220	ENSFHEG00000013106	rab42a	100	64.220	Fundulus_heteroclitus
ENSLACG00000012755	-	100	64.679	ENSGAFG00000002141	rab42a	100	64.679	Gambusia_affinis
ENSLACG00000012755	-	100	64.055	ENSHBUG00000015126	rab42a	82	64.055	Haplochromis_burtoni
ENSLACG00000012755	-	100	66.667	ENSIPUG00000011376	rab42a	100	66.667	Ictalurus_punctatus
ENSLACG00000012755	-	100	65.138	ENSKMAG00000007267	rab42a	100	65.596	Kryptolebias_marmoratus
ENSLACG00000012755	-	94	69.500	ENSLBEG00000001193	rab42a	100	65.438	Labrus_bergylta
ENSLACG00000012755	-	100	48.611	ENSLOCG00000015825	-	99	48.611	Lepisosteus_oculatus
ENSLACG00000012755	-	100	67.925	ENSLOCG00000003453	rab42a	100	67.925	Lepisosteus_oculatus
ENSLACG00000012755	-	94	68.500	ENSMAMG00000002296	rab42a	100	64.679	Mastacembelus_armatus
ENSLACG00000012755	-	100	64.055	ENSMZEG00005012460	rab42a	82	64.055	Maylandia_zebra
ENSLACG00000012755	-	100	64.679	ENSMMOG00000014358	rab42a	100	64.679	Mola_mola
ENSLACG00000012755	-	100	63.761	ENSNBRG00000021487	rab42a	82	63.761	Neolamprologus_brichardi
ENSLACG00000012755	-	100	64.220	ENSORLG00000022335	rab42a	100	64.220	Oryzias_latipes
ENSLACG00000012755	-	100	64.220	ENSORLG00020013895	rab42a	100	64.220	Oryzias_latipes_hni
ENSLACG00000012755	-	100	64.220	ENSORLG00015004273	rab42a	100	64.220	Oryzias_latipes_hsok
ENSLACG00000012755	-	100	64.220	ENSOMEG00000020418	rab42a	100	64.220	Oryzias_melastigma
ENSLACG00000012755	-	100	67.136	ENSPKIG00000021215	-	100	67.136	Paramormyrops_kingsleyae
ENSLACG00000012755	-	99	45.024	ENSPKIG00000015234	-	99	45.024	Paramormyrops_kingsleyae
ENSLACG00000012755	-	100	65.566	ENSPMGG00000024112	rab42a	97	65.566	Periophthalmus_magnuspinnatus
ENSLACG00000012755	-	100	64.679	ENSPFOG00000004838	rab42a	82	64.679	Poecilia_formosa
ENSLACG00000012755	-	100	64.679	ENSPLAG00000005628	rab42a	100	64.679	Poecilia_latipinna
ENSLACG00000012755	-	100	64.679	ENSPMEG00000019497	rab42a	100	64.679	Poecilia_mexicana
ENSLACG00000012755	-	100	64.679	ENSPREG00000013962	rab42a	100	64.679	Poecilia_reticulata
ENSLACG00000012755	-	100	64.055	ENSPNYG00000010325	rab42a	82	64.055	Pundamilia_nyererei
ENSLACG00000012755	-	100	65.728	ENSPNAG00000016567	rab42a	100	65.728	Pygocentrus_nattereri
ENSLACG00000012755	-	100	46.948	ENSSFOG00015016000	-	97	46.948	Scleropages_formosus
ENSLACG00000012755	-	100	65.728	ENSSFOG00015020732	rab42a	100	65.728	Scleropages_formosus
ENSLACG00000012755	-	100	63.761	ENSSMAG00000020311	rab42a	100	63.761	Scophthalmus_maximus
ENSLACG00000012755	-	100	64.220	ENSSDUG00000011851	rab42a	100	64.220	Seriola_dumerili
ENSLACG00000012755	-	100	64.220	ENSSLDG00000020354	rab42a	100	64.220	Seriola_lalandi_dorsalis
ENSLACG00000012755	-	94	68.500	ENSSPAG00000016167	rab42a	100	64.679	Stegastes_partitus
ENSLACG00000012755	-	100	65.138	ENSTRUG00000010224	rab42a	100	65.138	Takifugu_rubripes
ENSLACG00000012755	-	100	64.220	ENSXCOG00000003428	rab42a	100	64.220	Xiphophorus_couchianus
ENSLACG00000012755	-	100	64.220	ENSXMAG00000028376	rab42a	100	64.220	Xiphophorus_maculatus