EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000012777 (Gene tree)
Gene ID: 102360500
Gene Symbol: mrpl30
Alias: zgc:112089
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 12442 bases
Position: chrJH127255.1:761202-773643
Accession: 102360500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014519	Ribosomal_L30	PF00327.20	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014619	-	2137	XM_006001367	ENSLACP00000014519	160 (aa)	XP_006001429	H3AXZ8

Gene Model

Click here to download ENSLACG00000012777's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012777	mrpl30	100	50.617	ENSAPOG00000005884	mrpl30	100	50.617	Acanthochromis_polyacanthus
ENSLACG00000012777	mrpl30	100	48.148	ENSACIG00000022360	mrpl30	100	48.148	Amphilophus_citrinellus
ENSLACG00000012777	mrpl30	100	49.383	ENSAOCG00000002976	mrpl30	100	49.383	Amphiprion_ocellaris
ENSLACG00000012777	mrpl30	100	48.765	ENSAPEG00000006678	mrpl30	100	48.765	Amphiprion_percula
ENSLACG00000012777	mrpl30	100	50.000	ENSATEG00000008999	mrpl30	100	50.000	Anabas_testudineus
ENSLACG00000012777	mrpl30	84	66.423	ENSACAG00000000933	-	96	66.423	Anolis_carolinensis
ENSLACG00000012777	mrpl30	100	48.148	ENSACLG00000001506	mrpl30	100	48.148	Astatotilapia_calliptera
ENSLACG00000012777	mrpl30	100	53.086	ENSAMXG00000005341	mrpl30	100	53.086	Astyanax_mexicanus
ENSLACG00000012777	mrpl30	88	57.746	ENSCAFG00000008574	-	88	57.746	Canis_familiaris
ENSLACG00000012777	mrpl30	76	66.393	ENSTSYG00000030746	-	90	66.393	Carlito_syrichta
ENSLACG00000012777	mrpl30	58	49.462	ENSCAPG00000016402	-	100	49.462	Cavia_aperea
ENSLACG00000012777	mrpl30	66	52.830	ENSCPBG00000013807	-	94	52.830	Chrysemys_picta_bellii
ENSLACG00000012777	mrpl30	96	50.318	ENSCSEG00000004238	mrpl30	98	50.318	Cynoglossus_semilaevis
ENSLACG00000012777	mrpl30	100	51.852	ENSCVAG00000018330	mrpl30	100	51.852	Cyprinodon_variegatus
ENSLACG00000012777	mrpl30	84	58.088	ENSDARG00000069850	mrpl30	88	58.088	Danio_rerio
ENSLACG00000012777	mrpl30	98	47.059	ENSEBUG00000013592	mrpl30	93	54.198	Eptatretus_burgeri
ENSLACG00000012777	mrpl30	86	61.594	ENSELUG00000020222	mrpl30	87	61.594	Esox_lucius
ENSLACG00000012777	mrpl30	99	57.055	ENSFALG00000003937	-	99	57.055	Ficedula_albicollis
ENSLACG00000012777	mrpl30	83	52.985	ENSFHEG00000012666	mrpl30	71	52.985	Fundulus_heteroclitus
ENSLACG00000012777	mrpl30	98	59.236	ENSGALG00000016760	-	93	59.236	Gallus_gallus
ENSLACG00000012777	mrpl30	100	50.000	ENSGAFG00000021234	mrpl30	100	50.000	Gambusia_affinis
ENSLACG00000012777	mrpl30	100	47.531	ENSHBUG00000005392	mrpl30	100	47.531	Haplochromis_burtoni
ENSLACG00000012777	mrpl30	88	54.610	ENSHGLG00000019740	-	97	54.610	Heterocephalus_glaber_female
ENSLACG00000012777	mrpl30	88	54.610	ENSHGLG00100019694	-	97	54.610	Heterocephalus_glaber_male
ENSLACG00000012777	mrpl30	97	48.408	ENSHCOG00000003687	mrpl30	99	48.408	Hippocampus_comes
ENSLACG00000012777	mrpl30	100	51.553	ENSIPUG00000004313	mrpl30	100	51.553	Ictalurus_punctatus
ENSLACG00000012777	mrpl30	79	63.281	ENSSTOG00000033815	-	96	63.281	Ictidomys_tridecemlineatus
ENSLACG00000012777	mrpl30	87	51.429	ENSKMAG00000001499	mrpl30	88	51.429	Kryptolebias_marmoratus
ENSLACG00000012777	mrpl30	68	60.000	ENSLBEG00000027390	-	79	60.000	Labrus_bergylta
ENSLACG00000012777	mrpl30	100	51.852	ENSLBEG00000018368	mrpl30	100	51.852	Labrus_bergylta
ENSLACG00000012777	mrpl30	100	65.217	ENSLOCG00000001452	mrpl30	100	65.217	Lepisosteus_oculatus
ENSLACG00000012777	mrpl30	100	50.299	ENSMAMG00000016802	mrpl30	100	50.299	Mastacembelus_armatus
ENSLACG00000012777	mrpl30	100	48.148	ENSMZEG00005022036	mrpl30	100	48.148	Maylandia_zebra
ENSLACG00000012777	mrpl30	100	50.000	ENSMMOG00000019827	mrpl30	100	50.000	Mola_mola
ENSLACG00000012777	mrpl30	87	55.000	ENSMALG00000004911	mrpl30	97	52.597	Monopterus_albus
ENSLACG00000012777	mrpl30	100	47.531	ENSNBRG00000003924	mrpl30	100	47.531	Neolamprologus_brichardi
ENSLACG00000012777	mrpl30	71	71.304	ENSMEUG00000010134	-	71	71.304	Notamacropus_eugenii
ENSLACG00000012777	mrpl30	78	65.079	ENSODEG00000010546	-	95	65.079	Octodon_degus
ENSLACG00000012777	mrpl30	100	47.531	ENSONIG00000014167	mrpl30	100	47.531	Oreochromis_niloticus
ENSLACG00000012777	mrpl30	86	48.201	ENSORLG00000025091	mrpl30	77	48.201	Oryzias_latipes
ENSLACG00000012777	mrpl30	88	48.227	ENSORLG00020011064	mrpl30	92	48.227	Oryzias_latipes_hni
ENSLACG00000012777	mrpl30	88	48.227	ENSORLG00015014430	mrpl30	92	48.227	Oryzias_latipes_hsok
ENSLACG00000012777	mrpl30	88	47.887	ENSOMEG00000011587	mrpl30	79	47.887	Oryzias_melastigma
ENSLACG00000012777	mrpl30	100	57.143	ENSPKIG00000012379	mrpl30	100	57.143	Paramormyrops_kingsleyae
ENSLACG00000012777	mrpl30	84	71.324	ENSPSIG00000011557	-	96	71.324	Pelodiscus_sinensis
ENSLACG00000012777	mrpl30	80	50.000	ENSPMGG00000010475	mrpl30	86	50.000	Periophthalmus_magnuspinnatus
ENSLACG00000012777	mrpl30	67	60.185	ENSPMAG00000004676	mrpl30	67	60.185	Petromyzon_marinus
ENSLACG00000012777	mrpl30	100	52.469	ENSPFOG00000015775	mrpl30	100	52.469	Poecilia_formosa
ENSLACG00000012777	mrpl30	100	52.469	ENSPLAG00000021371	mrpl30	100	52.469	Poecilia_latipinna
ENSLACG00000012777	mrpl30	100	52.469	ENSPMEG00000006243	mrpl30	100	52.469	Poecilia_mexicana
ENSLACG00000012777	mrpl30	100	51.235	ENSPREG00000008569	mrpl30	100	51.235	Poecilia_reticulata
ENSLACG00000012777	mrpl30	73	52.991	ENSPCAG00000002174	-	93	52.991	Procavia_capensis
ENSLACG00000012777	mrpl30	100	48.148	ENSPNYG00000014319	mrpl30	100	48.148	Pundamilia_nyererei
ENSLACG00000012777	mrpl30	90	54.730	ENSPNAG00000009867	mrpl30	91	54.730	Pygocentrus_nattereri
ENSLACG00000012777	mrpl30	100	57.669	ENSSFOG00015010917	mrpl30	100	57.669	Scleropages_formosus
ENSLACG00000012777	mrpl30	92	50.327	ENSSMAG00000019930	mrpl30	96	50.327	Scophthalmus_maximus
ENSLACG00000012777	mrpl30	94	50.331	ENSSDUG00000006705	mrpl30	95	50.331	Seriola_dumerili
ENSLACG00000012777	mrpl30	94	50.331	ENSSLDG00000005509	mrpl30	95	50.331	Seriola_lalandi_dorsalis
ENSLACG00000012777	mrpl30	100	57.764	ENSSPUG00000009351	-	99	57.764	Sphenodon_punctatus
ENSLACG00000012777	mrpl30	99	50.943	ENSSPUG00000015069	-	98	50.943	Sphenodon_punctatus
ENSLACG00000012777	mrpl30	100	51.852	ENSSPAG00000020142	mrpl30	100	51.852	Stegastes_partitus
ENSLACG00000012777	mrpl30	73	70.085	ENSTGUG00000010133	-	100	70.085	Taeniopygia_guttata
ENSLACG00000012777	mrpl30	94	48.701	ENSTRUG00000022654	mrpl30	97	48.701	Takifugu_rubripes
ENSLACG00000012777	mrpl30	93	49.333	ENSTNIG00000013872	mrpl30	96	49.333	Tetraodon_nigroviridis
ENSLACG00000012777	mrpl30	86	54.676	ENSVPAG00000011780	-	96	54.676	Vicugna_pacos
ENSLACG00000012777	mrpl30	58	50.000	ENSVVUG00000028722	-	87	50.000	Vulpes_vulpes
ENSLACG00000012777	mrpl30	82	62.879	ENSVVUG00000010788	-	89	62.879	Vulpes_vulpes
ENSLACG00000012777	mrpl30	100	62.346	ENSXETG00000026571	mrpl30	100	62.346	Xenopus_tropicalis
ENSLACG00000012777	mrpl30	87	55.000	ENSXCOG00000018807	mrpl30	88	55.000	Xiphophorus_couchianus
ENSLACG00000012777	mrpl30	100	51.235	ENSXMAG00000024725	mrpl30	100	51.235	Xiphophorus_maculatus