EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012828 (Gene tree)
Gene ID: 102353895
Gene Symbol: PCCA
Alias: -
Full Name: propionyl-CoA carboxylase subunit alpha
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 488697 bases
Position: chrJH126821.1:770064-1258760
Accession: 102353895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000022921	RimK	PF08443.11	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025326	PCCA-201	2411	-	ENSLACP00000022921	644 (aa)	-	M3XJL5
ENSLACT00000014674	PCCA-202	2164	XM_005995494	ENSLACP00000014574	711 (aa)	XP_005995556	H3AY53
ENSLACT00000014675	PCCA-203	318	-	ENSLACP00000014575	105 (aa)	-	H3AY54
ENSLACT00000014676	PCCA-204	318	-	ENSLACP00000014576	105 (aa)	-	H3AY55

Gene Model

Click here to download ENSLACG00000012828's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm00280	Valine, leucine and isoleucine degradation	KEGG
lcm00630	Glyoxylate and dicarboxylate metabolism	KEGG
lcm00640	Propanoate metabolism	KEGG
lcm01100	Metabolic pathways	KEGG
lcm01200	Carbon metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012828	PCCA	100	40.455	ENSLACG00000018119	MCCC1	90	40.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012828	PCCA	100	83.075	ENSG00000175198	PCCA	93	91.176	Homo_sapiens
ENSLACG00000012828	PCCA	100	79.658	ENSAPOG00000002389	pcca	100	79.658	Acanthochromis_polyacanthus
ENSLACG00000012828	PCCA	98	84.019	ENSAMEG00000016627	PCCA	99	84.019	Ailuropoda_melanoleuca
ENSLACG00000012828	PCCA	92	84.314	ENSACIG00000015913	PCCA	94	84.314	Amphilophus_citrinellus
ENSLACG00000012828	PCCA	100	79.814	ENSAOCG00000005451	pcca	91	79.814	Amphiprion_ocellaris
ENSLACG00000012828	PCCA	100	79.969	ENSAPEG00000002955	pcca	91	79.969	Amphiprion_percula
ENSLACG00000012828	PCCA	100	79.037	ENSATEG00000004273	pcca	91	79.037	Anabas_testudineus
ENSLACG00000012828	PCCA	100	87.152	ENSAPLG00000002609	PCCA	94	87.152	Anas_platyrhynchos
ENSLACG00000012828	PCCA	98	83.758	ENSANAG00000031162	PCCA	95	83.758	Aotus_nancymaae
ENSLACG00000012828	PCCA	100	80.280	ENSACLG00000006725	pcca	90	80.280	Astatotilapia_calliptera
ENSLACG00000012828	PCCA	100	81.735	ENSBTAG00000010672	PCCA	89	81.735	Bos_taurus
ENSLACG00000012828	PCCA	100	83.075	ENSCJAG00000020998	PCCA	92	83.075	Callithrix_jacchus
ENSLACG00000012828	PCCA	100	83.153	ENSCAFG00000005838	PCCA	89	83.153	Canis_familiaris
ENSLACG00000012828	PCCA	100	83.153	ENSCAFG00020022683	PCCA	89	83.153	Canis_lupus_dingo
ENSLACG00000012828	PCCA	100	83.127	ENSCHIG00000007335	PCCA	88	83.127	Capra_hircus
ENSLACG00000012828	PCCA	100	83.540	ENSTSYG00000000053	PCCA	92	83.540	Carlito_syrichta
ENSLACG00000012828	PCCA	100	83.540	ENSCPOG00000011274	PCCA	88	83.540	Cavia_porcellus
ENSLACG00000012828	PCCA	100	83.540	ENSCCAG00000022253	PCCA	93	83.758	Cebus_capucinus
ENSLACG00000012828	PCCA	100	83.230	ENSCATG00000034177	PCCA	92	83.230	Cercocebus_atys
ENSLACG00000012828	PCCA	100	83.540	ENSCLAG00000003205	PCCA	88	83.540	Chinchilla_lanigera
ENSLACG00000012828	PCCA	100	83.385	ENSCSAG00000017493	PCCA	88	83.385	Chlorocebus_sabaeus
ENSLACG00000012828	PCCA	89	81.505	ENSCHOG00000000247	PCCA	83	81.505	Choloepus_hoffmanni
ENSLACG00000012828	PCCA	100	86.335	ENSCPBG00000018046	PCCA	90	86.335	Chrysemys_picta_bellii
ENSLACG00000012828	PCCA	100	63.117	ENSCING00000008081	-	92	63.117	Ciona_intestinalis
ENSLACG00000012828	PCCA	100	62.191	ENSCSAVG00000011361	-	97	61.562	Ciona_savignyi
ENSLACG00000012828	PCCA	100	82.919	ENSCANG00000013062	PCCA	92	82.919	Colobus_angolensis_palliatus
ENSLACG00000012828	PCCA	100	82.764	ENSCGRG00001015819	Pcca	89	82.764	Cricetulus_griseus_chok1gshd
ENSLACG00000012828	PCCA	100	82.764	ENSCGRG00000014796	Pcca	89	82.764	Cricetulus_griseus_crigri
ENSLACG00000012828	PCCA	100	77.640	ENSCSEG00000016645	pcca	91	77.640	Cynoglossus_semilaevis
ENSLACG00000012828	PCCA	97	79.487	ENSCVAG00000010430	pcca	94	86.047	Cyprinodon_variegatus
ENSLACG00000012828	PCCA	100	81.211	ENSDNOG00000042384	PCCA	100	81.211	Dasypus_novemcinctus
ENSLACG00000012828	PCCA	100	72.981	ENSDORG00000012949	Pcca	86	72.981	Dipodomys_ordii
ENSLACG00000012828	PCCA	100	84.056	ENSEASG00005022166	PCCA	88	84.056	Equus_asinus_asinus
ENSLACG00000012828	PCCA	100	84.056	ENSECAG00000018952	PCCA	88	84.056	Equus_caballus
ENSLACG00000012828	PCCA	100	78.416	ENSELUG00000002383	pcca	98	78.416	Esox_lucius
ENSLACG00000012828	PCCA	100	83.591	ENSFCAG00000012573	PCCA	92	83.591	Felis_catus
ENSLACG00000012828	PCCA	100	83.230	ENSFDAG00000005817	PCCA	86	83.230	Fukomys_damarensis
ENSLACG00000012828	PCCA	100	79.969	ENSFHEG00000011811	pcca	91	79.969	Fundulus_heteroclitus
ENSLACG00000012828	PCCA	100	79.658	ENSGAFG00000011218	pcca	91	79.658	Gambusia_affinis
ENSLACG00000012828	PCCA	100	79.969	ENSGACG00000002342	pcca	99	79.969	Gasterosteus_aculeatus
ENSLACG00000012828	PCCA	98	85.714	ENSGAGG00000010472	PCCA	95	85.714	Gopherus_agassizii
ENSLACG00000012828	PCCA	100	83.230	ENSGGOG00000012516	PCCA	92	83.230	Gorilla_gorilla
ENSLACG00000012828	PCCA	100	82.919	ENSHGLG00000011057	PCCA	88	82.919	Heterocephalus_glaber_female
ENSLACG00000012828	PCCA	100	82.919	ENSHGLG00100001468	PCCA	88	82.919	Heterocephalus_glaber_male
ENSLACG00000012828	PCCA	100	77.795	ENSHCOG00000016098	pcca	100	77.795	Hippocampus_comes
ENSLACG00000012828	PCCA	100	83.230	ENSSTOG00000021045	PCCA	93	83.230	Ictidomys_tridecemlineatus
ENSLACG00000012828	PCCA	100	82.453	ENSJJAG00000011150	Pcca	89	82.453	Jaculus_jaculus
ENSLACG00000012828	PCCA	100	80.124	ENSKMAG00000014632	pcca	90	80.124	Kryptolebias_marmoratus
ENSLACG00000012828	PCCA	100	82.609	ENSLAFG00000014958	PCCA	96	82.609	Loxodonta_africana
ENSLACG00000012828	PCCA	100	83.230	ENSMFAG00000020427	PCCA	92	83.230	Macaca_fascicularis
ENSLACG00000012828	PCCA	100	83.075	ENSMMUG00000004493	PCCA	92	83.075	Macaca_mulatta
ENSLACG00000012828	PCCA	100	83.075	ENSMNEG00000045261	PCCA	92	83.075	Macaca_nemestrina
ENSLACG00000012828	PCCA	100	83.075	ENSMLEG00000033842	PCCA	92	83.075	Mandrillus_leucophaeus
ENSLACG00000012828	PCCA	100	78.571	ENSMAMG00000009304	pcca	91	78.571	Mastacembelus_armatus
ENSLACG00000012828	PCCA	100	80.280	ENSMZEG00005018487	pcca	90	80.280	Maylandia_zebra
ENSLACG00000012828	PCCA	65	91.726	ENSMGAG00000014892	PCCA	100	91.726	Meleagris_gallopavo
ENSLACG00000012828	PCCA	98	83.016	ENSMAUG00000000626	Pcca	93	83.016	Mesocricetus_auratus
ENSLACG00000012828	PCCA	100	84.472	ENSMICG00000010685	-	92	84.472	Microcebus_murinus
ENSLACG00000012828	PCCA	66	84.075	ENSMICG00000038258	-	79	84.075	Microcebus_murinus
ENSLACG00000012828	PCCA	100	82.764	ENSMOCG00000015156	Pcca	93	80.124	Microtus_ochrogaster
ENSLACG00000012828	PCCA	100	78.106	ENSMALG00000009947	pcca	98	76.242	Monopterus_albus
ENSLACG00000012828	PCCA	100	84.006	MGP_CAROLIEiJ_G0019618	Pcca	89	84.006	Mus_caroli
ENSLACG00000012828	PCCA	100	84.006	ENSMUSG00000041650	Pcca	89	84.006	Mus_musculus
ENSLACG00000012828	PCCA	100	83.851	MGP_PahariEiJ_G0030634	Pcca	89	83.851	Mus_pahari
ENSLACG00000012828	PCCA	100	83.851	MGP_SPRETEiJ_G0020515	Pcca	89	83.851	Mus_spretus
ENSLACG00000012828	PCCA	100	83.746	ENSMPUG00000011333	PCCA	94	83.746	Mustela_putorius_furo
ENSLACG00000012828	PCCA	77	84.369	ENSMLUG00000005729	PCCA	85	84.369	Myotis_lucifugus
ENSLACG00000012828	PCCA	100	77.245	ENSNGAG00000016528	Pcca	89	77.554	Nannospalax_galili
ENSLACG00000012828	PCCA	72	79.787	ENSNBRG00000019075	pcca	82	79.787	Neolamprologus_brichardi
ENSLACG00000012828	PCCA	100	83.385	ENSODEG00000010667	PCCA	86	83.385	Octodon_degus
ENSLACG00000012828	PCCA	100	80.901	ENSONIG00000013151	pcca	90	80.901	Oreochromis_niloticus
ENSLACG00000012828	PCCA	88	82.953	ENSOCUG00000017230	PCCA	84	82.953	Oryctolagus_cuniculus
ENSLACG00000012828	PCCA	100	78.727	ENSORLG00000000361	pcca	90	78.727	Oryzias_latipes
ENSLACG00000012828	PCCA	100	78.727	ENSORLG00020005749	pcca	90	78.727	Oryzias_latipes_hni
ENSLACG00000012828	PCCA	100	78.727	ENSORLG00015012738	pcca	90	78.727	Oryzias_latipes_hsok
ENSLACG00000012828	PCCA	100	78.416	ENSOMEG00000001912	pcca	96	72.516	Oryzias_melastigma
ENSLACG00000012828	PCCA	100	84.317	ENSOGAG00000017088	PCCA	88	84.317	Otolemur_garnettii
ENSLACG00000012828	PCCA	100	82.972	ENSOARG00000004442	PCCA	100	82.972	Ovis_aries
ENSLACG00000012828	PCCA	100	83.075	ENSPPAG00000036841	PCCA	92	83.075	Pan_paniscus
ENSLACG00000012828	PCCA	100	83.591	ENSPPRG00000006626	PCCA	92	83.591	Panthera_pardus
ENSLACG00000012828	PCCA	98	83.651	ENSPTIG00000009732	PCCA	100	83.651	Panthera_tigris_altaica
ENSLACG00000012828	PCCA	100	82.919	ENSPTRG00000006001	PCCA	92	82.919	Pan_troglodytes
ENSLACG00000012828	PCCA	100	83.851	ENSPKIG00000004765	pcca	91	83.851	Paramormyrops_kingsleyae
ENSLACG00000012828	PCCA	100	86.957	ENSPSIG00000009154	PCCA	100	86.957	Pelodiscus_sinensis
ENSLACG00000012828	PCCA	100	82.919	ENSPEMG00000009083	Pcca	89	82.919	Peromyscus_maniculatus_bairdii
ENSLACG00000012828	PCCA	100	78.106	ENSPCIG00000027261	PCCA	88	78.106	Phascolarctos_cinereus
ENSLACG00000012828	PCCA	100	79.348	ENSPFOG00000014855	pcca	91	79.348	Poecilia_formosa
ENSLACG00000012828	PCCA	100	79.348	ENSPLAG00000016583	pcca	91	79.348	Poecilia_latipinna
ENSLACG00000012828	PCCA	100	79.193	ENSPMEG00000011613	pcca	91	79.193	Poecilia_mexicana
ENSLACG00000012828	PCCA	100	78.727	ENSPREG00000007537	pcca	98	78.727	Poecilia_reticulata
ENSLACG00000012828	PCCA	100	82.764	ENSPPYG00000005473	PCCA	88	82.764	Pongo_abelii
ENSLACG00000012828	PCCA	100	84.006	ENSPCOG00000015321	PCCA	92	84.006	Propithecus_coquereli
ENSLACG00000012828	PCCA	100	77.950	ENSPNYG00000008226	pcca	97	77.950	Pundamilia_nyererei
ENSLACG00000012828	PCCA	100	82.143	ENSPNAG00000011078	pcca	91	82.143	Pygocentrus_nattereri
ENSLACG00000012828	PCCA	100	83.230	ENSRROG00000030936	PCCA	92	83.230	Rhinopithecus_roxellana
ENSLACG00000012828	PCCA	100	83.696	ENSSBOG00000020005	PCCA	92	83.696	Saimiri_boliviensis_boliviensis
ENSLACG00000012828	PCCA	54	91.117	ENSSHAG00000014732	-	100	91.117	Sarcophilus_harrisii
ENSLACG00000012828	PCCA	100	84.006	ENSSFOG00015021986	pcca	93	83.917	Scleropages_formosus
ENSLACG00000012828	PCCA	100	79.845	ENSSMAG00000018126	pcca	100	79.845	Scophthalmus_maximus
ENSLACG00000012828	PCCA	100	80.435	ENSSDUG00000021326	pcca	91	80.435	Seriola_dumerili
ENSLACG00000012828	PCCA	100	80.435	ENSSLDG00000016568	pcca	91	80.435	Seriola_lalandi_dorsalis
ENSLACG00000012828	PCCA	98	83.439	ENSSPUG00000006036	PCCA	97	83.201	Sphenodon_punctatus
ENSLACG00000012828	PCCA	93	78.727	ENSSPAG00000022191	pcca	82	78.727	Stegastes_partitus
ENSLACG00000012828	PCCA	100	83.591	ENSSSCG00000009522	PCCA	93	82.271	Sus_scrofa
ENSLACG00000012828	PCCA	100	84.056	ENSTGUG00000010915	PCCA	94	84.056	Taeniopygia_guttata
ENSLACG00000012828	PCCA	100	80.280	ENSTRUG00000004990	pcca	91	80.280	Takifugu_rubripes
ENSLACG00000012828	PCCA	100	83.179	ENSTTRG00000002569	PCCA	89	83.179	Tursiops_truncatus
ENSLACG00000012828	PCCA	100	83.901	ENSUMAG00000023453	PCCA	100	83.901	Ursus_maritimus
ENSLACG00000012828	PCCA	100	83.153	ENSVVUG00000013550	PCCA	95	83.201	Vulpes_vulpes
ENSLACG00000012828	PCCA	100	79.037	ENSXCOG00000014159	pcca	98	79.037	Xiphophorus_couchianus
ENSLACG00000012828	PCCA	100	79.348	ENSXMAG00000014869	pcca	91	79.348	Xiphophorus_maculatus