EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012869 (Gene tree)
Gene ID: 102352733
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 39239 bases
Position: chrJH126607.1:775177-814415
Accession: 102352733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014620	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSLACP00000014621	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014722	RAB1A-202	690	-	ENSLACP00000014621	229 (aa)	-	H3AYA0
ENSLACT00000014721	RAB1A-201	1979	XM_005989530	ENSLACP00000014620	205 (aa)	XP_005989592	H3AY99

Gene Model

Click here to download ENSLACG00000012869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012869	RAB1A	77	40.994	ENSLACG00000017799	RAB36	60	40.994
ENSLACG00000012869	RAB1A	95	34.171	ENSLACG00000008809	zgc:100918	97	34.171
ENSLACG00000012869	RAB1A	86	44.382	ENSLACG00000016074	RAB39B	84	44.382
ENSLACG00000012869	RAB1A	80	34.146	ENSLACG00000013122	RRAS2	81	34.146
ENSLACG00000012869	RAB1A	79	52.795	ENSLACG00000014446	RAB2B	98	52.795
ENSLACG00000012869	RAB1A	97	46.667	ENSLACG00000012521	RAB2A	99	46.667
ENSLACG00000012869	RAB1A	86	45.506	ENSLACG00000002332	-	84	45.506
ENSLACG00000012869	RAB1A	100	47.642	ENSLACG00000012184	RAB11A	99	47.642
ENSLACG00000012869	RAB1A	79	50.000	ENSLACG00000022111	-	81	50.000
ENSLACG00000012869	RAB1A	78	39.877	ENSLACG00000015770	RAB7A	79	39.877
ENSLACG00000012869	RAB1A	61	32.558	ENSLACG00000016598	arl3l1	60	32.558
ENSLACG00000012869	RAB1A	88	33.889	ENSLACG00000004025	RAB23	84	32.500
ENSLACG00000012869	RAB1A	99	96.535	ENSLACG00000012717	RAB1B	100	96.535
ENSLACG00000012869	RAB1A	96	32.487	ENSLACG00000016518	-	60	32.487
ENSLACG00000012869	RAB1A	95	38.144	ENSLACG00000007092	RAB22A	97	38.144
ENSLACG00000012869	RAB1A	63	34.615	ENSLACG00000018793	RAN	88	34.615
ENSLACG00000012869	RAB1A	81	31.250	ENSLACG00000003581	rasd3	82	31.250
ENSLACG00000012869	RAB1A	98	42.308	ENSLACG00000013571	RAB33B	76	46.286
ENSLACG00000012869	RAB1A	100	45.540	ENSLACG00000011380	rab11al	98	45.540
ENSLACG00000012869	RAB1A	60	31.200	ENSLACG00000002695	ARL4A	59	31.200
ENSLACG00000012869	RAB1A	80	36.471	ENSLACG00000002523	RAB29	83	36.471
ENSLACG00000012869	RAB1A	80	53.939	ENSLACG00000016974	RAB11B	96	53.939
ENSLACG00000012869	RAB1A	92	46.032	ENSLACG00000010461	RAB12	68	49.704
ENSLACG00000012869	RAB1A	89	47.283	ENSLACG00000009310	rab18a	93	47.692
ENSLACG00000012869	RAB1A	97	42.500	ENSLACG00000011256	rab18b	96	42.500
ENSLACG00000012869	RAB1A	85	55.556	ENSLACG00000008103	-	98	55.556
ENSLACG00000012869	RAB1A	94	38.071	ENSLACG00000012674	si:dkey-34d22.5	94	38.071
ENSLACG00000012869	RAB1A	81	52.410	ENSLACG00000006407	RAB30	82	52.410
ENSLACG00000012869	RAB1A	84	32.759	ENSLACG00000017138	RRAS	99	32.759
ENSLACG00000012869	RAB1A	75	39.355	ENSLACG00000003722	rabl2	67	39.355
ENSLACG00000012869	RAB1A	76	39.623	ENSLACG00000017891	RAB9B	82	38.857
ENSLACG00000012869	RAB1A	61	39.683	ENSLACG00000010885	-	82	40.000
ENSLACG00000012869	RAB1A	64	30.147	ENSLACG00000010889	-	70	30.147
ENSLACG00000012869	RAB1A	68	30.496	ENSLACG00000001595	ARL3	72	30.496
ENSLACG00000012869	RAB1A	100	46.512	ENSLACG00000016857	-	99	46.512
ENSLACG00000012869	RAB1A	80	35.758	ENSLACG00000014985	RAP2B	94	36.158
ENSLACG00000012869	RAB1A	68	30.282	ENSLACG00000015350	ARL4C	68	30.282
ENSLACG00000012869	RAB1A	94	37.879	ENSLACG00000013980	rab41	92	37.879
ENSLACG00000012869	RAB1A	89	31.016	ENSLACG00000016958	-	89	31.016
ENSLACG00000012869	RAB1A	99	45.050	ENSLACG00000011181	RAB14	93	45.050
ENSLACG00000012869	RAB1A	95	40.404	ENSLACG00000012755	-	93	40.404
ENSLACG00000012869	RAB1A	60	69.672	ENSLACG00000018444	RAB35	60	69.672
ENSLACG00000012869	RAB1A	94	38.776	ENSLACG00000005168	RAB6A	93	38.776
ENSLACG00000012869	RAB1A	85	36.723	ENSLACG00000010042	-	85	36.723
ENSLACG00000012869	RAB1A	57	34.746	ENSLACG00000014881	ARL8A	61	34.746
ENSLACG00000012869	RAB1A	95	44.845	ENSLACG00000004663	RAB5A	89	44.845
ENSLACG00000012869	RAB1A	100	44.340	ENSLACG00000011157	RAB25	99	44.340
ENSLACG00000012869	RAB1A	79	33.742	ENSLACG00000012088	rheb	88	33.742
ENSLACG00000012869	RAB1A	82	42.938	ENSLACG00000011557	zgc:101559	77	42.938
ENSLACG00000012869	RAB1A	57	30.508	ENSLACG00000003169	-	61	30.508
ENSLACG00000012869	RAB1A	84	35.593	ENSLACG00000018427	HRAS	86	37.195
ENSLACG00000012869	RAB1A	79	38.037	ENSLACG00000018428	NRAS	85	38.037
ENSLACG00000012869	RAB1A	80	38.415	ENSLACG00000017464	KRAS	95	35.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012869	RAB1A	100	98.537	ENSG00000138069	RAB1A	100	98.537	Homo_sapiens
ENSLACG00000012869	RAB1A	99	96.535	ENSAPOG00000008143	-	100	96.535	Acanthochromis_polyacanthus
ENSLACG00000012869	RAB1A	100	98.537	ENSAMEG00000001127	RAB1A	100	98.537	Ailuropoda_melanoleuca
ENSLACG00000012869	RAB1A	99	96.535	ENSAOCG00000020606	-	100	96.535	Amphiprion_ocellaris
ENSLACG00000012869	RAB1A	99	96.535	ENSAPEG00000022488	-	100	96.535	Amphiprion_percula
ENSLACG00000012869	RAB1A	100	98.537	ENSANAG00000020929	RAB1A	100	98.537	Aotus_nancymaae
ENSLACG00000012869	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSLACG00000012869	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSLACG00000012869	RAB1A	100	98.537	ENSBTAG00000016720	RAB1A	100	98.990	Bos_taurus
ENSLACG00000012869	RAB1A	100	98.537	ENSCJAG00000046275	RAB1A	100	98.537	Callithrix_jacchus
ENSLACG00000012869	RAB1A	100	98.537	ENSCAFG00000003187	RAB1A	100	98.537	Canis_familiaris
ENSLACG00000012869	RAB1A	100	98.537	ENSCAFG00020026971	RAB1A	100	98.537	Canis_lupus_dingo
ENSLACG00000012869	RAB1A	96	98.985	ENSCHIG00000014060	RAB1A	96	98.985	Capra_hircus
ENSLACG00000012869	RAB1A	100	96.585	ENSTSYG00000005996	RAB1A	100	98.985	Carlito_syrichta
ENSLACG00000012869	RAB1A	100	98.537	ENSCPOG00000015437	RAB1A	100	98.537	Cavia_porcellus
ENSLACG00000012869	RAB1A	100	98.537	ENSCCAG00000021869	RAB1A	100	98.537	Cebus_capucinus
ENSLACG00000012869	RAB1A	100	98.537	ENSCATG00000030853	RAB1A	100	98.537	Cercocebus_atys
ENSLACG00000012869	RAB1A	100	98.537	ENSCLAG00000014766	RAB1A	100	98.537	Chinchilla_lanigera
ENSLACG00000012869	RAB1A	100	98.049	ENSCPBG00000013243	RAB1A	100	98.049	Chrysemys_picta_bellii
ENSLACG00000012869	RAB1A	100	96.098	ENSCANG00000035916	RAB1A	100	96.098	Colobus_angolensis_palliatus
ENSLACG00000012869	RAB1A	100	98.537	ENSCGRG00001012691	-	100	98.537	Cricetulus_griseus_chok1gshd
ENSLACG00000012869	RAB1A	100	98.537	ENSCGRG00000008456	-	100	98.537	Cricetulus_griseus_crigri
ENSLACG00000012869	RAB1A	100	98.537	ENSDNOG00000018236	RAB1A	100	98.537	Dasypus_novemcinctus
ENSLACG00000012869	RAB1A	100	98.537	ENSDORG00000028628	-	100	98.537	Dipodomys_ordii
ENSLACG00000012869	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSLACG00000012869	RAB1A	99	99.010	ENSETEG00000002205	RAB1A	100	99.010	Echinops_telfairi
ENSLACG00000012869	RAB1A	100	98.537	ENSEASG00005007298	RAB1A	100	98.537	Equus_asinus_asinus
ENSLACG00000012869	RAB1A	100	98.537	ENSECAG00000009926	RAB1A	100	98.537	Equus_caballus
ENSLACG00000012869	RAB1A	99	99.010	ENSEEUG00000011721	RAB1A	100	99.010	Erinaceus_europaeus
ENSLACG00000012869	RAB1A	99	96.569	ENSELUG00000012166	RAB1A	96	96.569	Esox_lucius
ENSLACG00000012869	RAB1A	100	98.537	ENSFCAG00000002536	RAB1A	100	98.537	Felis_catus
ENSLACG00000012869	RAB1A	99	96.059	ENSFALG00000013624	RAB1A	99	96.059	Ficedula_albicollis
ENSLACG00000012869	RAB1A	100	98.537	ENSFDAG00000019505	-	100	98.537	Fukomys_damarensis
ENSLACG00000012869	RAB1A	99	95.545	ENSFHEG00000014414	-	100	95.545	Fundulus_heteroclitus
ENSLACG00000012869	RAB1A	100	98.049	ENSGALG00000031582	RAB1A	100	98.049	Gallus_gallus
ENSLACG00000012869	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSLACG00000012869	RAB1A	100	98.049	ENSGAGG00000006802	RAB1A	100	98.049	Gopherus_agassizii
ENSLACG00000012869	RAB1A	100	98.537	ENSGGOG00000026603	RAB1A	100	98.537	Gorilla_gorilla
ENSLACG00000012869	RAB1A	100	98.537	ENSHGLG00000013585	RAB1A	100	98.537	Heterocephalus_glaber_female
ENSLACG00000012869	RAB1A	99	97.525	ENSHGLG00100007994	RAB1A	99	97.525	Heterocephalus_glaber_male
ENSLACG00000012869	RAB1A	100	98.537	ENSSTOG00000020693	-	100	98.537	Ictidomys_tridecemlineatus
ENSLACG00000012869	RAB1A	96	98.985	ENSJJAG00000014396	Rab1a	100	98.985	Jaculus_jaculus
ENSLACG00000012869	RAB1A	96	96.447	ENSKMAG00000014038	-	93	96.447	Kryptolebias_marmoratus
ENSLACG00000012869	RAB1A	99	96.040	ENSLBEG00000028426	RAB1A	100	96.040	Labrus_bergylta
ENSLACG00000012869	RAB1A	100	98.537	ENSLAFG00000016666	RAB1A	100	98.537	Loxodonta_africana
ENSLACG00000012869	RAB1A	100	98.537	ENSMFAG00000046246	RAB1A	100	98.537	Macaca_fascicularis
ENSLACG00000012869	RAB1A	96	98.985	ENSMMUG00000021721	RAB1A	91	98.985	Macaca_mulatta
ENSLACG00000012869	RAB1A	95	97.938	ENSMNEG00000028414	-	97	97.938	Macaca_nemestrina
ENSLACG00000012869	RAB1A	100	98.537	ENSMLEG00000042535	RAB1A	100	98.537	Mandrillus_leucophaeus
ENSLACG00000012869	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSLACG00000012869	RAB1A	96	98.477	ENSMGAG00000004611	RAB1A	98	98.477	Meleagris_gallopavo
ENSLACG00000012869	RAB1A	100	98.049	ENSMAUG00000012156	Rab1a	100	98.049	Mesocricetus_auratus
ENSLACG00000012869	RAB1A	100	98.537	ENSMICG00000012587	RAB1A	100	98.537	Microcebus_murinus
ENSLACG00000012869	RAB1A	100	98.049	ENSMOCG00000017022	Rab1a	100	98.049	Microtus_ochrogaster
ENSLACG00000012869	RAB1A	99	94.059	ENSMMOG00000018709	RAB1A	100	94.059	Mola_mola
ENSLACG00000012869	RAB1A	100	98.049	ENSMODG00000003340	RAB1A	100	98.049	Monodelphis_domestica
ENSLACG00000012869	RAB1A	100	98.537	MGP_CAROLIEiJ_G0016115	Rab1a	100	98.537	Mus_caroli
ENSLACG00000012869	RAB1A	100	98.537	ENSMUSG00000020149	Rab1a	100	99.010	Mus_musculus
ENSLACG00000012869	RAB1A	100	98.537	MGP_PahariEiJ_G0016776	Rab1a	100	98.537	Mus_pahari
ENSLACG00000012869	RAB1A	100	98.537	MGP_SPRETEiJ_G0016958	Rab1a	100	99.010	Mus_spretus
ENSLACG00000012869	RAB1A	100	98.537	ENSMPUG00000006139	RAB1A	82	98.537	Mustela_putorius_furo
ENSLACG00000012869	RAB1A	100	98.537	ENSMLUG00000009489	RAB1A	100	98.537	Myotis_lucifugus
ENSLACG00000012869	RAB1A	100	98.537	ENSNGAG00000005838	Rab1a	100	98.537	Nannospalax_galili
ENSLACG00000012869	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSLACG00000012869	RAB1A	96	98.985	ENSOPRG00000006595	RAB1A	100	98.985	Ochotona_princeps
ENSLACG00000012869	RAB1A	94	98.958	ENSODEG00000011248	-	96	98.958	Octodon_degus
ENSLACG00000012869	RAB1A	99	94.118	ENSONIG00000006819	-	100	94.118	Oreochromis_niloticus
ENSLACG00000012869	RAB1A	100	98.049	ENSOANG00000012438	RAB1A	100	98.049	Ornithorhynchus_anatinus
ENSLACG00000012869	RAB1A	100	98.537	ENSOCUG00000017003	RAB1A	100	98.537	Oryctolagus_cuniculus
ENSLACG00000012869	RAB1A	100	98.537	ENSOGAG00000026181	RAB1A	100	98.537	Otolemur_garnettii
ENSLACG00000012869	RAB1A	96	98.985	ENSOARG00000019997	RAB1A	97	98.985	Ovis_aries
ENSLACG00000012869	RAB1A	99	99.010	ENSPPAG00000030253	RAB1A	100	99.010	Pan_paniscus
ENSLACG00000012869	RAB1A	100	98.537	ENSPPRG00000025077	RAB1A	100	98.537	Panthera_pardus
ENSLACG00000012869	RAB1A	96	98.985	ENSPTIG00000013471	RAB1A	97	98.985	Panthera_tigris_altaica
ENSLACG00000012869	RAB1A	100	98.537	ENSPTRG00000011989	RAB1A	100	98.537	Pan_troglodytes
ENSLACG00000012869	RAB1A	100	98.537	ENSPANG00000010485	RAB1A	100	98.537	Papio_anubis
ENSLACG00000012869	RAB1A	99	96.040	ENSPSIG00000008028	RAB1A	99	96.040	Pelodiscus_sinensis
ENSLACG00000012869	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSLACG00000012869	RAB1A	100	98.537	ENSPEMG00000009340	Rab1a	100	98.537	Peromyscus_maniculatus_bairdii
ENSLACG00000012869	RAB1A	100	98.049	ENSPCIG00000023212	RAB1A	100	98.049	Phascolarctos_cinereus
ENSLACG00000012869	RAB1A	99	93.627	ENSPFOG00000000498	-	99	93.627	Poecilia_formosa
ENSLACG00000012869	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSLACG00000012869	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSLACG00000012869	RAB1A	100	98.537	ENSPPYG00000012360	RAB1A	100	98.537	Pongo_abelii
ENSLACG00000012869	RAB1A	100	98.537	ENSPCOG00000017244	RAB1A	100	98.537	Propithecus_coquereli
ENSLACG00000012869	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSLACG00000012869	RAB1A	100	98.537	ENSRNOG00000004992	Rab1a	100	98.537	Rattus_norvegicus
ENSLACG00000012869	RAB1A	100	98.537	ENSSBOG00000023732	RAB1A	100	98.537	Saimiri_boliviensis_boliviensis
ENSLACG00000012869	RAB1A	98	97.015	ENSSHAG00000003597	RAB1A	98	97.015	Sarcophilus_harrisii
ENSLACG00000012869	RAB1A	99	96.535	ENSSMAG00000021049	-	100	96.535	Scophthalmus_maximus
ENSLACG00000012869	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSLACG00000012869	RAB1A	100	98.049	ENSSPUG00000012822	RAB1A	100	98.049	Sphenodon_punctatus
ENSLACG00000012869	RAB1A	99	96.535	ENSSPAG00000012564	-	100	96.535	Stegastes_partitus
ENSLACG00000012869	RAB1A	100	98.537	ENSSSCG00000008359	RAB1A	100	98.985	Sus_scrofa
ENSLACG00000012869	RAB1A	100	95.610	ENSTGUG00000002328	RAB1A	100	95.610	Taeniopygia_guttata
ENSLACG00000012869	RAB1A	99	96.040	ENSTRUG00000024994	RAB1A	100	96.040	Takifugu_rubripes
ENSLACG00000012869	RAB1A	96	98.985	ENSUMAG00000021038	RAB1A	99	98.985	Ursus_maritimus
ENSLACG00000012869	RAB1A	97	98.485	ENSVPAG00000005640	RAB1A	99	98.485	Vicugna_pacos
ENSLACG00000012869	RAB1A	100	98.537	ENSVVUG00000027588	RAB1A	100	98.537	Vulpes_vulpes
ENSLACG00000012869	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus