EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000012908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1002 bases
Position: chrJH127289.1:783039-784040
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014667	zf-CCHC	PF00098.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014769	-	912	XM_006001769	ENSLACP00000014667	304 (aa)	-	H3AYE6

Gene Model

Click here to download ENSLACG00000012908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000012908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000012908	-	92	53.025	ENSLACG00000004531	-	81	53.025
ENSLACG00000012908	-	99	49.671	ENSLACG00000006128	-	86	49.671
ENSLACG00000012908	-	96	57.483	ENSLACG00000002768	-	74	57.483
ENSLACG00000012908	-	100	51.645	ENSLACG00000004689	-	82	51.645
ENSLACG00000012908	-	96	52.881	ENSLACG00000004000	-	85	52.881
ENSLACG00000012908	-	100	56.452	ENSLACG00000005078	-	96	56.452
ENSLACG00000012908	-	99	47.368	ENSLACG00000002836	-	86	47.368
ENSLACG00000012908	-	100	53.398	ENSLACG00000008039	-	87	53.398
ENSLACG00000012908	-	100	82.026	ENSLACG00000010543	-	100	82.026
ENSLACG00000012908	-	82	59.144	ENSLACG00000012373	-	81	60.317
ENSLACG00000012908	-	98	50.836	ENSLACG00000017942	-	86	50.836
ENSLACG00000012908	-	100	78.431	ENSLACG00000002057	-	87	78.431
ENSLACG00000012908	-	99	50.814	ENSLACG00000002363	-	70	50.814
ENSLACG00000012908	-	100	52.941	ENSLACG00000000325	-	85	54.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000012908	-	84	43.066	ENSCPBG00000028243	-	87	43.066	Chrysemys_picta_bellii
ENSLACG00000012908	-	56	30.220	ENSGAGG00000016678	-	64	30.220	Gopherus_agassizii
ENSLACG00000012908	-	65	43.500	ENSGAGG00000002892	-	92	43.500	Gopherus_agassizii
ENSLACG00000012908	-	100	50.323	ENSXETG00000006819	-	66	50.323	Xenopus_tropicalis
ENSLACG00000012908	-	100	50.000	ENSXETG00000005082	ankrd31	72	50.000	Xenopus_tropicalis
ENSLACG00000012908	-	100	50.000	ENSXETG00000026538	-	71	50.000	Xenopus_tropicalis
ENSLACG00000012908	-	100	50.000	ENSXETG00000019379	-	72	50.000	Xenopus_tropicalis