EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000013033 (Gene tree)
Gene ID: 102358373
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 26410 bases
Position: chrJH126590.1:799849-826258
Accession: 102358373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014805	RtcB	PF01139.17	8e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000014909	RTCB-201	6137	XM_005988623	ENSLACP00000014805	505 (aa)	XP_005988685	H3AYT4

Gene Model

Click here to download ENSLACG00000013033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013033	RTCB	100	95.446	ENSG00000100220	RTCB	100	95.446	Homo_sapiens
ENSLACG00000013033	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSLACG00000013033	RTCB	100	95.248	ENSAMEG00000016152	RTCB	100	95.248	Ailuropoda_melanoleuca
ENSLACG00000013033	RTCB	100	90.099	ENSACIG00000009083	rtcb	100	90.099	Amphilophus_citrinellus
ENSLACG00000013033	RTCB	100	94.851	ENSAOCG00000005662	rtcb	100	96.087	Amphiprion_ocellaris
ENSLACG00000013033	RTCB	100	94.851	ENSAPEG00000024701	rtcb	100	94.851	Amphiprion_percula
ENSLACG00000013033	RTCB	96	90.349	ENSAPEG00000024653	rtcb	100	90.349	Amphiprion_percula
ENSLACG00000013033	RTCB	100	94.851	ENSATEG00000000618	rtcb	100	94.851	Anabas_testudineus
ENSLACG00000013033	RTCB	100	92.678	ENSACAG00000014817	RTCB	100	92.678	Anolis_carolinensis
ENSLACG00000013033	RTCB	100	80.000	ENSANAG00000018191	-	91	80.000	Aotus_nancymaae
ENSLACG00000013033	RTCB	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSLACG00000013033	RTCB	100	93.069	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSLACG00000013033	RTCB	100	94.257	ENSAMXG00000042320	rtcb	100	94.257	Astyanax_mexicanus
ENSLACG00000013033	RTCB	100	95.644	ENSBTAG00000011070	RTCB	100	95.644	Bos_taurus
ENSLACG00000013033	RTCB	100	72.673	WBGene00008877	rtcb-1	100	72.673	Caenorhabditis_elegans
ENSLACG00000013033	RTCB	100	95.248	ENSCJAG00000006128	RTCB	100	95.248	Callithrix_jacchus
ENSLACG00000013033	RTCB	100	95.248	ENSCAFG00000001785	RTCB	100	95.248	Canis_familiaris
ENSLACG00000013033	RTCB	100	91.089	ENSCAFG00000010789	-	100	91.089	Canis_familiaris
ENSLACG00000013033	RTCB	87	91.591	ENSCAFG00020018953	-	99	91.591	Canis_lupus_dingo
ENSLACG00000013033	RTCB	100	95.248	ENSCAFG00020004890	-	100	95.248	Canis_lupus_dingo
ENSLACG00000013033	RTCB	100	95.446	ENSCHIG00000027009	-	100	95.446	Capra_hircus
ENSLACG00000013033	RTCB	100	95.644	ENSTSYG00000012320	RTCB	100	95.644	Carlito_syrichta
ENSLACG00000013033	RTCB	94	95.798	ENSCAPG00000011647	RTCB	96	95.798	Cavia_aperea
ENSLACG00000013033	RTCB	100	95.248	ENSCCAG00000000618	RTCB	100	95.248	Cebus_capucinus
ENSLACG00000013033	RTCB	100	95.644	ENSCATG00000033424	RTCB	100	95.644	Cercocebus_atys
ENSLACG00000013033	RTCB	100	95.644	ENSCLAG00000007997	RTCB	100	95.644	Chinchilla_lanigera
ENSLACG00000013033	RTCB	100	95.446	ENSCSAG00000008351	RTCB	100	95.446	Chlorocebus_sabaeus
ENSLACG00000013033	RTCB	100	80.990	ENSCHOG00000009123	RTCB	100	80.990	Choloepus_hoffmanni
ENSLACG00000013033	RTCB	100	96.238	ENSCPBG00000023184	RTCB	100	96.238	Chrysemys_picta_bellii
ENSLACG00000013033	RTCB	100	80.990	ENSCING00000003830	-	100	80.990	Ciona_intestinalis
ENSLACG00000013033	RTCB	100	81.386	ENSCSAVG00000008124	-	100	80.638	Ciona_savignyi
ENSLACG00000013033	RTCB	100	91.881	ENSCANG00000001891	RTCB	100	91.881	Colobus_angolensis_palliatus
ENSLACG00000013033	RTCB	100	95.446	ENSCGRG00001011173	Rtcb	100	95.446	Cricetulus_griseus_chok1gshd
ENSLACG00000013033	RTCB	93	96.178	ENSCGRG00000009587	-	96	96.178	Cricetulus_griseus_crigri
ENSLACG00000013033	RTCB	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSLACG00000013033	RTCB	82	93.750	ENSCVAG00000000569	rtcb	95	93.750	Cyprinodon_variegatus
ENSLACG00000013033	RTCB	100	94.653	ENSDARG00000101047	rtcb	100	94.653	Danio_rerio
ENSLACG00000013033	RTCB	80	91.646	ENSDNOG00000012425	RTCB	99	91.646	Dasypus_novemcinctus
ENSLACG00000013033	RTCB	100	95.248	ENSDORG00000010855	Rtcb	100	95.248	Dipodomys_ordii
ENSLACG00000013033	RTCB	99	84.493	FBgn0032781	RtcB	99	84.493	Drosophila_melanogaster
ENSLACG00000013033	RTCB	100	88.713	ENSETEG00000001988	RTCB	100	88.713	Echinops_telfairi
ENSLACG00000013033	RTCB	100	86.535	ENSEBUG00000014235	rtcb	100	86.535	Eptatretus_burgeri
ENSLACG00000013033	RTCB	100	95.644	ENSEASG00005019059	RTCB	100	95.644	Equus_asinus_asinus
ENSLACG00000013033	RTCB	100	95.644	ENSECAG00000023998	RTCB	100	95.644	Equus_caballus
ENSLACG00000013033	RTCB	88	87.220	ENSEEUG00000006251	RTCB	99	87.220	Erinaceus_europaeus
ENSLACG00000013033	RTCB	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSLACG00000013033	RTCB	100	95.446	ENSFCAG00000026480	RTCB	100	95.446	Felis_catus
ENSLACG00000013033	RTCB	100	95.842	ENSFALG00000013334	RTCB	100	95.842	Ficedula_albicollis
ENSLACG00000013033	RTCB	100	95.248	ENSFDAG00000018150	RTCB	100	95.248	Fukomys_damarensis
ENSLACG00000013033	RTCB	100	94.059	ENSFHEG00000009595	rtcb	100	94.059	Fundulus_heteroclitus
ENSLACG00000013033	RTCB	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSLACG00000013033	RTCB	100	96.436	ENSGALG00000012611	RTCB	100	96.436	Gallus_gallus
ENSLACG00000013033	RTCB	100	94.257	ENSGAFG00000004198	rtcb	100	94.257	Gambusia_affinis
ENSLACG00000013033	RTCB	100	94.059	ENSGACG00000000586	rtcb	100	94.059	Gasterosteus_aculeatus
ENSLACG00000013033	RTCB	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSLACG00000013033	RTCB	100	95.446	ENSGGOG00000011402	RTCB	100	95.446	Gorilla_gorilla
ENSLACG00000013033	RTCB	100	93.069	ENSHBUG00000020571	rtcb	100	93.069	Haplochromis_burtoni
ENSLACG00000013033	RTCB	93	68.443	ENSHGLG00000001066	-	99	68.443	Heterocephalus_glaber_female
ENSLACG00000013033	RTCB	100	95.248	ENSHGLG00000004492	RTCB	100	95.248	Heterocephalus_glaber_female
ENSLACG00000013033	RTCB	100	95.248	ENSHGLG00100008965	RTCB	100	95.248	Heterocephalus_glaber_male
ENSLACG00000013033	RTCB	100	92.110	ENSHCOG00000006450	rtcb	100	92.110	Hippocampus_comes
ENSLACG00000013033	RTCB	100	93.861	ENSIPUG00000015443	rtcb	100	93.861	Ictalurus_punctatus
ENSLACG00000013033	RTCB	100	95.050	ENSSTOG00000003878	RTCB	100	95.050	Ictidomys_tridecemlineatus
ENSLACG00000013033	RTCB	100	95.446	ENSJJAG00000010667	Rtcb	100	95.446	Jaculus_jaculus
ENSLACG00000013033	RTCB	100	94.257	ENSKMAG00000013178	rtcb	100	94.257	Kryptolebias_marmoratus
ENSLACG00000013033	RTCB	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSLACG00000013033	RTCB	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSLACG00000013033	RTCB	100	95.050	ENSLOCG00000016515	rtcb	99	95.050	Lepisosteus_oculatus
ENSLACG00000013033	RTCB	100	95.050	ENSLAFG00000002082	RTCB	100	95.050	Loxodonta_africana
ENSLACG00000013033	RTCB	100	95.446	ENSMFAG00000034419	RTCB	100	95.446	Macaca_fascicularis
ENSLACG00000013033	RTCB	100	95.446	ENSMMUG00000006720	RTCB	100	95.446	Macaca_mulatta
ENSLACG00000013033	RTCB	100	95.446	ENSMNEG00000040669	RTCB	100	95.446	Macaca_nemestrina
ENSLACG00000013033	RTCB	100	95.644	ENSMLEG00000040505	RTCB	100	95.644	Mandrillus_leucophaeus
ENSLACG00000013033	RTCB	100	94.257	ENSMAMG00000020676	rtcb	100	94.257	Mastacembelus_armatus
ENSLACG00000013033	RTCB	100	93.069	ENSMZEG00005018942	rtcb	100	93.069	Maylandia_zebra
ENSLACG00000013033	RTCB	100	96.055	ENSMGAG00000012805	RTCB	100	96.055	Meleagris_gallopavo
ENSLACG00000013033	RTCB	60	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSLACG00000013033	RTCB	100	76.238	ENSMICG00000036677	-	100	76.238	Microcebus_murinus
ENSLACG00000013033	RTCB	100	95.248	ENSMICG00000013303	-	100	95.248	Microcebus_murinus
ENSLACG00000013033	RTCB	100	95.446	ENSMOCG00000002440	Rtcb	100	95.446	Microtus_ochrogaster
ENSLACG00000013033	RTCB	100	94.851	ENSMMOG00000005987	rtcb	100	94.851	Mola_mola
ENSLACG00000013033	RTCB	100	96.238	ENSMODG00000001414	RTCB	100	96.238	Monodelphis_domestica
ENSLACG00000013033	RTCB	100	93.663	ENSMALG00000007603	rtcb	100	93.663	Monopterus_albus
ENSLACG00000013033	RTCB	100	95.446	MGP_CAROLIEiJ_G0015689	Rtcb	100	95.446	Mus_caroli
ENSLACG00000013033	RTCB	100	95.446	ENSMUSG00000001783	Rtcb	100	95.446	Mus_musculus
ENSLACG00000013033	RTCB	100	95.446	MGP_PahariEiJ_G0031396	Rtcb	100	95.446	Mus_pahari
ENSLACG00000013033	RTCB	100	95.446	MGP_SPRETEiJ_G0016507	Rtcb	100	95.446	Mus_spretus
ENSLACG00000013033	RTCB	100	95.248	ENSMPUG00000012285	RTCB	100	95.248	Mustela_putorius_furo
ENSLACG00000013033	RTCB	100	92.505	ENSMLUG00000007803	RTCB	100	92.505	Myotis_lucifugus
ENSLACG00000013033	RTCB	72	97.333	ENSNGAG00000005093	Rtcb	100	97.333	Nannospalax_galili
ENSLACG00000013033	RTCB	100	93.069	ENSNBRG00000017202	rtcb	100	93.069	Neolamprologus_brichardi
ENSLACG00000013033	RTCB	100	95.446	ENSNLEG00000004960	RTCB	100	95.446	Nomascus_leucogenys
ENSLACG00000013033	RTCB	100	71.287	ENSMEUG00000007809	-	100	71.287	Notamacropus_eugenii
ENSLACG00000013033	RTCB	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSLACG00000013033	RTCB	100	63.564	ENSODEG00000005042	-	100	63.564	Octodon_degus
ENSLACG00000013033	RTCB	82	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSLACG00000013033	RTCB	100	94.059	ENSONIG00000007474	rtcb	100	94.059	Oreochromis_niloticus
ENSLACG00000013033	RTCB	100	95.644	ENSOANG00000005524	RTCB	100	95.644	Ornithorhynchus_anatinus
ENSLACG00000013033	RTCB	93	95.106	ENSOCUG00000008270	RTCB	96	95.106	Oryctolagus_cuniculus
ENSLACG00000013033	RTCB	100	94.059	ENSORLG00000020093	rtcb	100	94.059	Oryzias_latipes
ENSLACG00000013033	RTCB	100	94.059	ENSORLG00020003706	rtcb	100	94.059	Oryzias_latipes_hni
ENSLACG00000013033	RTCB	100	94.257	ENSORLG00015002968	rtcb	100	94.257	Oryzias_latipes_hsok
ENSLACG00000013033	RTCB	100	93.861	ENSOMEG00000021278	rtcb	100	93.861	Oryzias_melastigma
ENSLACG00000013033	RTCB	100	94.653	ENSOGAG00000001425	RTCB	100	94.653	Otolemur_garnettii
ENSLACG00000013033	RTCB	100	95.446	ENSOARG00000018008	RTCB	100	95.446	Ovis_aries
ENSLACG00000013033	RTCB	100	95.446	ENSPPAG00000028667	RTCB	100	95.446	Pan_paniscus
ENSLACG00000013033	RTCB	100	95.446	ENSPPRG00000004038	RTCB	100	95.446	Panthera_pardus
ENSLACG00000013033	RTCB	94	91.789	ENSPTIG00000020499	RTCB	97	92.842	Panthera_tigris_altaica
ENSLACG00000013033	RTCB	100	95.446	ENSPTRG00000014287	RTCB	100	95.446	Pan_troglodytes
ENSLACG00000013033	RTCB	100	95.446	ENSPANG00000016035	RTCB	100	95.446	Papio_anubis
ENSLACG00000013033	RTCB	100	93.069	ENSPKIG00000001881	rtcb	100	93.069	Paramormyrops_kingsleyae
ENSLACG00000013033	RTCB	91	96.522	ENSPSIG00000011690	RTCB	100	96.522	Pelodiscus_sinensis
ENSLACG00000013033	RTCB	100	94.455	ENSPMGG00000016672	rtcb	100	94.455	Periophthalmus_magnuspinnatus
ENSLACG00000013033	RTCB	100	95.446	ENSPEMG00000019548	Rtcb	100	95.446	Peromyscus_maniculatus_bairdii
ENSLACG00000013033	RTCB	100	90.693	ENSPMAG00000005657	rtcb	100	90.693	Petromyzon_marinus
ENSLACG00000013033	RTCB	100	95.842	ENSPCIG00000009467	RTCB	100	95.842	Phascolarctos_cinereus
ENSLACG00000013033	RTCB	100	94.653	ENSPFOG00000003058	rtcb	100	94.653	Poecilia_formosa
ENSLACG00000013033	RTCB	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSLACG00000013033	RTCB	100	94.653	ENSPMEG00000006227	rtcb	100	94.653	Poecilia_mexicana
ENSLACG00000013033	RTCB	100	94.455	ENSPREG00000018467	rtcb	100	94.455	Poecilia_reticulata
ENSLACG00000013033	RTCB	100	95.446	ENSPPYG00000011752	RTCB	100	95.446	Pongo_abelii
ENSLACG00000013033	RTCB	93	78.602	ENSPCAG00000013641	RTCB	100	78.602	Procavia_capensis
ENSLACG00000013033	RTCB	100	95.446	ENSPCOG00000017243	RTCB	100	95.446	Propithecus_coquereli
ENSLACG00000013033	RTCB	93	94.255	ENSPVAG00000002380	RTCB	100	94.255	Pteropus_vampyrus
ENSLACG00000013033	RTCB	100	93.069	ENSPNYG00000022760	rtcb	100	93.069	Pundamilia_nyererei
ENSLACG00000013033	RTCB	100	94.455	ENSPNAG00000009209	rtcb	100	94.455	Pygocentrus_nattereri
ENSLACG00000013033	RTCB	100	95.446	ENSRNOG00000004813	Rtcb	100	95.446	Rattus_norvegicus
ENSLACG00000013033	RTCB	100	87.154	ENSRBIG00000042090	RTCB	100	87.154	Rhinopithecus_bieti
ENSLACG00000013033	RTCB	100	90.495	ENSSBOG00000020085	-	100	90.495	Saimiri_boliviensis_boliviensis
ENSLACG00000013033	RTCB	94	96.624	ENSSHAG00000016277	RTCB	100	96.624	Sarcophilus_harrisii
ENSLACG00000013033	RTCB	100	93.267	ENSSFOG00015000763	rtcb	100	93.267	Scleropages_formosus
ENSLACG00000013033	RTCB	100	93.267	ENSSFOG00015011572	RTCB	100	93.267	Scleropages_formosus
ENSLACG00000013033	RTCB	100	91.485	ENSSMAG00000005096	rtcb	100	91.485	Scophthalmus_maximus
ENSLACG00000013033	RTCB	100	93.861	ENSSDUG00000012605	rtcb	100	93.861	Seriola_dumerili
ENSLACG00000013033	RTCB	100	94.059	ENSSLDG00000019458	rtcb	100	94.059	Seriola_lalandi_dorsalis
ENSLACG00000013033	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSLACG00000013033	RTCB	100	95.248	ENSSPUG00000012814	RTCB	100	95.248	Sphenodon_punctatus
ENSLACG00000013033	RTCB	100	94.851	ENSSPAG00000004623	rtcb	100	94.851	Stegastes_partitus
ENSLACG00000013033	RTCB	100	95.446	ENSSSCG00000000158	RTCB	100	95.446	Sus_scrofa
ENSLACG00000013033	RTCB	100	95.842	ENSTGUG00000010947	RTCB	99	95.842	Taeniopygia_guttata
ENSLACG00000013033	RTCB	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSLACG00000013033	RTCB	100	92.871	ENSTNIG00000002484	rtcb	100	92.871	Tetraodon_nigroviridis
ENSLACG00000013033	RTCB	100	82.178	ENSTBEG00000004418	RTCB	100	82.178	Tupaia_belangeri
ENSLACG00000013033	RTCB	93	94.894	ENSTTRG00000006417	RTCB	100	94.894	Tursiops_truncatus
ENSLACG00000013033	RTCB	100	95.248	ENSUAMG00000022792	RTCB	100	95.248	Ursus_americanus
ENSLACG00000013033	RTCB	100	95.248	ENSUMAG00000017225	RTCB	100	95.248	Ursus_maritimus
ENSLACG00000013033	RTCB	100	95.248	ENSVPAG00000005375	RTCB	100	95.248	Vicugna_pacos
ENSLACG00000013033	RTCB	100	95.248	ENSVVUG00000023408	RTCB	100	96.069	Vulpes_vulpes
ENSLACG00000013033	RTCB	100	93.663	ENSXETG00000011523	rtcb	100	93.663	Xenopus_tropicalis
ENSLACG00000013033	RTCB	100	94.257	ENSXMAG00000002855	rtcb	100	94.257	Xiphophorus_maculatus