EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000013153 (Gene tree)
Gene ID: 102357633
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 23612 bases
Position: chrJH127129.1:815479-839090
Accession: 102357633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000022693	TRM13	PF05206.14	2.7e-88	1	1
ENSLACP00000014943	TRM13	PF05206.14	6.5e-88	1	1
ENSLACP00000014943	zf-U11-48K	PF05253.12	1.9e-10	1	1
ENSLACP00000014943	zf-TRM13_CCCH	PF11722.8	2.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025436	TRMT13-201	2695	-	ENSLACP00000022693	397 (aa)	-	M3XIY7
ENSLACT00000015048	TRMT13-202	1419	XM_006000021	ENSLACP00000014943	472 (aa)	XP_006000083	H3AZ72

Gene Model

Click here to download ENSLACG00000013153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013153	TRMT13	100	61.692	ENSG00000122435	TRMT13	96	62.716	Homo_sapiens
ENSLACG00000013153	TRMT13	97	51.215	ENSAPOG00000015131	trmt13	99	51.417	Acanthochromis_polyacanthus
ENSLACG00000013153	TRMT13	100	60.891	ENSAMEG00000008917	TRMT13	99	61.297	Ailuropoda_melanoleuca
ENSLACG00000013153	TRMT13	99	51.613	ENSACIG00000005804	trmt13	95	52.361	Amphilophus_citrinellus
ENSLACG00000013153	TRMT13	97	51.509	ENSAOCG00000023585	trmt13	99	51.509	Amphiprion_ocellaris
ENSLACG00000013153	TRMT13	97	51.308	ENSAPEG00000004025	trmt13	99	51.308	Amphiprion_percula
ENSLACG00000013153	TRMT13	99	52.120	ENSATEG00000006597	trmt13	96	53.780	Anabas_testudineus
ENSLACG00000013153	TRMT13	100	62.779	ENSAPLG00000014924	TRMT13	99	64.252	Anas_platyrhynchos
ENSLACG00000013153	TRMT13	99	61.772	ENSACAG00000003498	TRMT13	99	62.151	Anolis_carolinensis
ENSLACG00000013153	TRMT13	100	60.891	ENSANAG00000019525	TRMT13	97	61.489	Aotus_nancymaae
ENSLACG00000013153	TRMT13	99	55.025	ENSACLG00000020018	trmt13	98	55.628	Astatotilapia_calliptera
ENSLACG00000013153	TRMT13	99	55.556	ENSAMXG00000017963	trmt13	99	56.394	Astyanax_mexicanus
ENSLACG00000013153	TRMT13	99	60.879	ENSBTAG00000015781	TRMT13	98	60.879	Bos_taurus
ENSLACG00000013153	TRMT13	100	60.591	ENSCJAG00000000200	TRMT13	90	73.684	Callithrix_jacchus
ENSLACG00000013153	TRMT13	76	60.390	ENSCAFG00000020021	TRMT13	96	60.390	Canis_familiaris
ENSLACG00000013153	TRMT13	55	69.498	ENSCAFG00020011572	TRMT13	91	68.966	Canis_lupus_dingo
ENSLACG00000013153	TRMT13	99	60.759	ENSCHIG00000015395	TRMT13	98	60.759	Capra_hircus
ENSLACG00000013153	TRMT13	100	59.553	ENSTSYG00000010811	TRMT13	95	65.625	Carlito_syrichta
ENSLACG00000013153	TRMT13	82	46.646	ENSCAPG00000009085	TRMT13	95	50.143	Cavia_aperea
ENSLACG00000013153	TRMT13	99	61.713	ENSCPOG00000000694	TRMT13	95	62.963	Cavia_porcellus
ENSLACG00000013153	TRMT13	100	60.891	ENSCCAG00000023772	TRMT13	96	62.017	Cebus_capucinus
ENSLACG00000013153	TRMT13	100	61.443	ENSCATG00000033556	TRMT13	96	62.284	Cercocebus_atys
ENSLACG00000013153	TRMT13	99	60.150	ENSCLAG00000008220	TRMT13	97	61.429	Chinchilla_lanigera
ENSLACG00000013153	TRMT13	100	61.194	ENSCSAG00000001506	TRMT13	96	62.284	Chlorocebus_sabaeus
ENSLACG00000013153	TRMT13	100	64.339	ENSCPBG00000026671	TRMT13	97	64.894	Chrysemys_picta_bellii
ENSLACG00000013153	TRMT13	100	61.443	ENSCANG00000034659	TRMT13	96	62.500	Colobus_angolensis_palliatus
ENSLACG00000013153	TRMT13	99	61.489	ENSCGRG00001021601	Trmt13	98	61.489	Cricetulus_griseus_chok1gshd
ENSLACG00000013153	TRMT13	61	58.300	ENSCGRG00000000093	-	95	58.300	Cricetulus_griseus_crigri
ENSLACG00000013153	TRMT13	98	52.165	ENSCSEG00000000591	trmt13	99	52.165	Cynoglossus_semilaevis
ENSLACG00000013153	TRMT13	99	50.369	ENSCVAG00000017342	trmt13	95	51.782	Cyprinodon_variegatus
ENSLACG00000013153	TRMT13	98	60.129	ENSDARG00000102846	trmt13	97	60.129	Danio_rerio
ENSLACG00000013153	TRMT13	58	63.768	ENSDNOG00000001710	TRMT13	84	63.768	Dasypus_novemcinctus
ENSLACG00000013153	TRMT13	100	60.345	ENSDORG00000015808	Trmt13	96	61.538	Dipodomys_ordii
ENSLACG00000013153	TRMT13	99	33.063	FBgn0037435	CG18048	96	33.063	Drosophila_melanogaster
ENSLACG00000013153	TRMT13	99	53.165	ENSETEG00000005819	TRMT13	98	53.165	Echinops_telfairi
ENSLACG00000013153	TRMT13	99	44.665	ENSEBUG00000014444	trmt13	96	46.237	Eptatretus_burgeri
ENSLACG00000013153	TRMT13	100	60.250	ENSEASG00005015918	TRMT13	98	60.981	Equus_asinus_asinus
ENSLACG00000013153	TRMT13	100	60.250	ENSECAG00000022626	TRMT13	98	60.981	Equus_caballus
ENSLACG00000013153	TRMT13	78	58.621	ENSEEUG00000000294	TRMT13	78	58.621	Erinaceus_europaeus
ENSLACG00000013153	TRMT13	97	56.989	ENSELUG00000003803	trmt13	98	57.634	Esox_lucius
ENSLACG00000013153	TRMT13	100	60.099	ENSFCAG00000030618	TRMT13	98	60.888	Felis_catus
ENSLACG00000013153	TRMT13	99	63.224	ENSFALG00000002424	TRMT13	95	63.676	Ficedula_albicollis
ENSLACG00000013153	TRMT13	99	61.347	ENSFDAG00000006342	TRMT13	96	61.915	Fukomys_damarensis
ENSLACG00000013153	TRMT13	77	55.145	ENSFHEG00000022954	trmt13	99	53.186	Fundulus_heteroclitus
ENSLACG00000013153	TRMT13	99	49.235	ENSGMOG00000013223	trmt13	99	51.441	Gadus_morhua
ENSLACG00000013153	TRMT13	100	63.317	ENSGALG00000005290	TRMT13	99	62.526	Gallus_gallus
ENSLACG00000013153	TRMT13	78	53.034	ENSGAFG00000001577	trmt13	83	53.034	Gambusia_affinis
ENSLACG00000013153	TRMT13	98	54.176	ENSGACG00000013428	trmt13	98	54.390	Gasterosteus_aculeatus
ENSLACG00000013153	TRMT13	100	63.682	ENSGAGG00000023303	TRMT13	97	73.134	Gopherus_agassizii
ENSLACG00000013153	TRMT13	100	61.443	ENSGGOG00000005616	TRMT13	96	62.500	Gorilla_gorilla
ENSLACG00000013153	TRMT13	99	55.528	ENSHBUG00000007754	trmt13	98	56.061	Haplochromis_burtoni
ENSLACG00000013153	TRMT13	99	62.344	ENSHGLG00000002164	TRMT13	96	62.766	Heterocephalus_glaber_female
ENSLACG00000013153	TRMT13	99	62.344	ENSHGLG00100001618	TRMT13	96	62.766	Heterocephalus_glaber_male
ENSLACG00000013153	TRMT13	100	47.631	ENSHCOG00000020553	trmt13	97	49.892	Hippocampus_comes
ENSLACG00000013153	TRMT13	99	59.140	ENSIPUG00000024787	trmt13	99	58.925	Ictalurus_punctatus
ENSLACG00000013153	TRMT13	99	59.900	ENSSTOG00000013483	TRMT13	97	60.684	Ictidomys_tridecemlineatus
ENSLACG00000013153	TRMT13	100	59.579	ENSJJAG00000018012	Trmt13	99	59.579	Jaculus_jaculus
ENSLACG00000013153	TRMT13	80	51.420	ENSKMAG00000007639	trmt13	96	51.420	Kryptolebias_marmoratus
ENSLACG00000013153	TRMT13	98	53.586	ENSLBEG00000020238	trmt13	99	53.945	Labrus_bergylta
ENSLACG00000013153	TRMT13	99	59.227	ENSLOCG00000000418	trmt13	99	59.442	Lepisosteus_oculatus
ENSLACG00000013153	TRMT13	92	59.299	ENSLAFG00000002383	TRMT13	99	59.299	Loxodonta_africana
ENSLACG00000013153	TRMT13	100	61.194	ENSMFAG00000034681	TRMT13	96	62.284	Macaca_fascicularis
ENSLACG00000013153	TRMT13	100	61.194	ENSMMUG00000004243	TRMT13	96	62.284	Macaca_mulatta
ENSLACG00000013153	TRMT13	100	61.194	ENSMNEG00000036102	TRMT13	96	62.284	Macaca_nemestrina
ENSLACG00000013153	TRMT13	100	61.443	ENSMLEG00000034258	TRMT13	96	62.500	Mandrillus_leucophaeus
ENSLACG00000013153	TRMT13	99	52.357	ENSMAMG00000016597	trmt13	95	54.310	Mastacembelus_armatus
ENSLACG00000013153	TRMT13	99	54.774	ENSMZEG00005020959	trmt13	98	55.411	Maylandia_zebra
ENSLACG00000013153	TRMT13	100	63.317	ENSMGAG00000006970	TRMT13	99	64.775	Meleagris_gallopavo
ENSLACG00000013153	TRMT13	99	60.759	ENSMAUG00000010448	Trmt13	96	61.171	Mesocricetus_auratus
ENSLACG00000013153	TRMT13	100	60.149	ENSMICG00000005283	TRMT13	99	60.251	Microcebus_murinus
ENSLACG00000013153	TRMT13	99	60.957	ENSMOCG00000019914	Trmt13	96	61.555	Microtus_ochrogaster
ENSLACG00000013153	TRMT13	55	50.187	ENSMMOG00000007762	trmt13	90	50.187	Mola_mola
ENSLACG00000013153	TRMT13	100	61.728	ENSMODG00000003646	TRMT13	96	62.076	Monodelphis_domestica
ENSLACG00000013153	TRMT13	99	51.145	ENSMALG00000020965	trmt13	97	52.043	Monopterus_albus
ENSLACG00000013153	TRMT13	100	60.349	MGP_CAROLIEiJ_G0025568	Trmt13	94	65.476	Mus_caroli
ENSLACG00000013153	TRMT13	100	61.194	ENSMUSG00000033439	Trmt13	94	66.667	Mus_musculus
ENSLACG00000013153	TRMT13	100	60.546	MGP_PahariEiJ_G0027014	Trmt13	93	66.265	Mus_pahari
ENSLACG00000013153	TRMT13	99	60.859	MGP_SPRETEiJ_G0026518	Trmt13	94	66.667	Mus_spretus
ENSLACG00000013153	TRMT13	93	61.333	ENSMPUG00000002078	-	98	61.333	Mustela_putorius_furo
ENSLACG00000013153	TRMT13	99	58.122	ENSMLUG00000002124	TRMT13	96	58.531	Myotis_lucifugus
ENSLACG00000013153	TRMT13	98	51.820	ENSNBRG00000006783	trmt13	97	51.820	Neolamprologus_brichardi
ENSLACG00000013153	TRMT13	100	61.443	ENSNLEG00000035917	TRMT13	96	62.500	Nomascus_leucogenys
ENSLACG00000013153	TRMT13	50	60.251	ENSMEUG00000013346	-	96	60.251	Notamacropus_eugenii
ENSLACG00000013153	TRMT13	65	74.359	ENSOPRG00000012048	TRMT13	63	74.359	Ochotona_princeps
ENSLACG00000013153	TRMT13	99	54.774	ENSONIG00000004574	trmt13	98	55.411	Oreochromis_niloticus
ENSLACG00000013153	TRMT13	99	61.750	ENSOANG00000012057	TRMT13	97	63.294	Ornithorhynchus_anatinus
ENSLACG00000013153	TRMT13	100	60.099	ENSOCUG00000023095	TRMT13	98	61.053	Oryctolagus_cuniculus
ENSLACG00000013153	TRMT13	100	47.561	ENSORLG00000003320	trmt13	99	48.734	Oryzias_latipes
ENSLACG00000013153	TRMT13	99	47.901	ENSORLG00020005972	trmt13	97	49.460	Oryzias_latipes_hni
ENSLACG00000013153	TRMT13	98	52.665	ENSORLG00015002270	trmt13	99	52.665	Oryzias_latipes_hsok
ENSLACG00000013153	TRMT13	98	53.747	ENSOMEG00000006724	trmt13	94	53.747	Oryzias_melastigma
ENSLACG00000013153	TRMT13	99	59.950	ENSOGAG00000005618	TRMT13	95	60.084	Otolemur_garnettii
ENSLACG00000013153	TRMT13	99	60.759	ENSOARG00000017983	TRMT13	98	60.759	Ovis_aries
ENSLACG00000013153	TRMT13	100	61.194	ENSPPAG00000043736	TRMT13	96	62.284	Pan_paniscus
ENSLACG00000013153	TRMT13	100	60.149	ENSPPRG00000003424	TRMT13	98	60.888	Panthera_pardus
ENSLACG00000013153	TRMT13	100	60.149	ENSPTIG00000018598	TRMT13	98	60.888	Panthera_tigris_altaica
ENSLACG00000013153	TRMT13	100	61.443	ENSPTRG00000001001	TRMT13	96	62.500	Pan_troglodytes
ENSLACG00000013153	TRMT13	100	61.443	ENSPANG00000007598	TRMT13	96	62.500	Papio_anubis
ENSLACG00000013153	TRMT13	99	58.209	ENSPKIG00000001514	trmt13	99	58.209	Paramormyrops_kingsleyae
ENSLACG00000013153	TRMT13	93	62.834	ENSPSIG00000012703	TRMT13	99	63.876	Pelodiscus_sinensis
ENSLACG00000013153	TRMT13	98	52.155	ENSPMGG00000013298	trmt13	93	52.155	Periophthalmus_magnuspinnatus
ENSLACG00000013153	TRMT13	99	59.500	ENSPEMG00000000275	Trmt13	96	60.341	Peromyscus_maniculatus_bairdii
ENSLACG00000013153	TRMT13	98	46.929	ENSPMAG00000000823	trmt13	98	48.637	Petromyzon_marinus
ENSLACG00000013153	TRMT13	100	62.843	ENSPCIG00000007699	TRMT13	98	62.420	Phascolarctos_cinereus
ENSLACG00000013153	TRMT13	99	50.382	ENSPFOG00000008675	trmt13	95	51.209	Poecilia_formosa
ENSLACG00000013153	TRMT13	99	49.505	ENSPLAG00000009709	trmt13	99	50.855	Poecilia_latipinna
ENSLACG00000013153	TRMT13	99	48.762	ENSPMEG00000022954	trmt13	99	50.321	Poecilia_mexicana
ENSLACG00000013153	TRMT13	78	54.090	ENSPREG00000005645	trmt13	92	53.405	Poecilia_reticulata
ENSLACG00000013153	TRMT13	100	61.194	ENSPPYG00000001120	TRMT13	97	62.128	Pongo_abelii
ENSLACG00000013153	TRMT13	100	59.406	ENSPCAG00000002340	TRMT13	97	59.831	Procavia_capensis
ENSLACG00000013153	TRMT13	100	59.158	ENSPCOG00000017984	TRMT13	99	60.185	Propithecus_coquereli
ENSLACG00000013153	TRMT13	100	60.644	ENSPVAG00000017430	TRMT13	99	61.297	Pteropus_vampyrus
ENSLACG00000013153	TRMT13	99	52.764	ENSPNYG00000013690	trmt13	98	53.680	Pundamilia_nyererei
ENSLACG00000013153	TRMT13	99	57.479	ENSPNAG00000022130	trmt13	99	57.479	Pygocentrus_nattereri
ENSLACG00000013153	TRMT13	99	60.859	ENSRNOG00000015140	Trmt13	92	62.445	Rattus_norvegicus
ENSLACG00000013153	TRMT13	100	61.443	ENSRBIG00000037686	TRMT13	96	62.500	Rhinopithecus_bieti
ENSLACG00000013153	TRMT13	100	61.443	ENSRROG00000044057	TRMT13	96	62.500	Rhinopithecus_roxellana
ENSLACG00000013153	TRMT13	95	31.128	YOL125W	-	95	31.128	Saccharomyces_cerevisiae
ENSLACG00000013153	TRMT13	100	61.139	ENSSBOG00000026541	TRMT13	96	62.232	Saimiri_boliviensis_boliviensis
ENSLACG00000013153	TRMT13	100	63.433	ENSSHAG00000005213	TRMT13	95	64.884	Sarcophilus_harrisii
ENSLACG00000013153	TRMT13	99	57.962	ENSSFOG00015017560	trmt13	99	58.174	Scleropages_formosus
ENSLACG00000013153	TRMT13	99	54.187	ENSSMAG00000014592	trmt13	96	55.319	Scophthalmus_maximus
ENSLACG00000013153	TRMT13	99	50.614	ENSSDUG00000015508	trmt13	96	52.201	Seriola_dumerili
ENSLACG00000013153	TRMT13	99	51.707	ENSSLDG00000019060	trmt13	96	53.474	Seriola_lalandi_dorsalis
ENSLACG00000013153	TRMT13	99	54.156	ENSSARG00000010344	TRMT13	96	56.798	Sorex_araneus
ENSLACG00000013153	TRMT13	100	62.563	ENSSPUG00000016339	TRMT13	99	63.077	Sphenodon_punctatus
ENSLACG00000013153	TRMT13	96	54.310	ENSSPAG00000011922	trmt13	98	54.310	Stegastes_partitus
ENSLACG00000013153	TRMT13	99	60.465	ENSSSCG00000006869	TRMT13	98	60.465	Sus_scrofa
ENSLACG00000013153	TRMT13	99	63.889	ENSTGUG00000005253	TRMT13	98	63.974	Taeniopygia_guttata
ENSLACG00000013153	TRMT13	98	49.502	ENSTRUG00000008400	trmt13	99	49.894	Takifugu_rubripes
ENSLACG00000013153	TRMT13	100	47.654	ENSTBEG00000008911	TRMT13	99	48.434	Tupaia_belangeri
ENSLACG00000013153	TRMT13	51	74.324	ENSTTRG00000015302	-	60	74.324	Tursiops_truncatus
ENSLACG00000013153	TRMT13	100	58.168	ENSUAMG00000017251	TRMT13	98	58.787	Ursus_americanus
ENSLACG00000013153	TRMT13	100	60.891	ENSUMAG00000007901	TRMT13	99	61.297	Ursus_maritimus
ENSLACG00000013153	TRMT13	99	46.582	ENSVPAG00000001034	TRMT13	97	48.810	Vicugna_pacos
ENSLACG00000013153	TRMT13	99	61.153	ENSVVUG00000021996	TRMT13	95	62.256	Vulpes_vulpes
ENSLACG00000013153	TRMT13	99	57.360	ENSXETG00000013204	trmt13	96	58.862	Xenopus_tropicalis
ENSLACG00000013153	TRMT13	99	49.628	ENSXMAG00000010765	trmt13	99	50.749	Xiphophorus_maculatus