EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000013178 (Gene tree)
Gene ID: 102354690
Gene Symbol: rnf113a
Alias: wu:fj91a07|zgc:110007|znf183
Full Name: ring finger protein 113A
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 18158 bases
Position: chrJH126776.1:819009-837166
Accession: 102354690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014972	zf-CCCH	PF00642.24	2.2e-09	1	1
ENSLACP00000014971	zf-CCCH	PF00642.24	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015077	-	5115	XM_005994610	ENSLACP00000014972	324 (aa)	XP_005994672	H3AZA1
ENSLACT00000015076	-	1038	-	ENSLACP00000014971	346 (aa)	-	H3AZA0

Gene Model

Click here to download ENSLACG00000013178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013178	rnf113a	96	73.585	ENSG00000125352	RNF113A	93	74.528	Homo_sapiens
ENSLACG00000013178	rnf113a	94	60.841	ENSG00000139797	RNF113B	94	60.323	Homo_sapiens
ENSLACG00000013178	rnf113a	95	81.350	ENSAPOG00000017510	rnf113a	96	81.350	Acanthochromis_polyacanthus
ENSLACG00000013178	rnf113a	93	73.016	ENSAMEG00000019845	-	90	73.651	Ailuropoda_melanoleuca
ENSLACG00000013178	rnf113a	93	72.667	ENSACIG00000007458	rnf113a	92	73.333	Amphilophus_citrinellus
ENSLACG00000013178	rnf113a	95	81.029	ENSAOCG00000003485	rnf113a	96	81.029	Amphiprion_ocellaris
ENSLACG00000013178	rnf113a	95	81.350	ENSAPEG00000001084	rnf113a	96	81.350	Amphiprion_percula
ENSLACG00000013178	rnf113a	99	77.399	ENSATEG00000022950	rnf113a	100	77.399	Anabas_testudineus
ENSLACG00000013178	rnf113a	82	81.852	ENSAPLG00000012510	-	99	81.852	Anas_platyrhynchos
ENSLACG00000013178	rnf113a	91	78.451	ENSACAG00000012485	-	95	79.054	Anolis_carolinensis
ENSLACG00000013178	rnf113a	92	62.623	ENSANAG00000020431	RNF113B	92	62.745	Aotus_nancymaae
ENSLACG00000013178	rnf113a	96	73.016	ENSANAG00000013925	-	93	72.698	Aotus_nancymaae
ENSLACG00000013178	rnf113a	92	73.443	ENSANAG00000024332	-	91	74.426	Aotus_nancymaae
ENSLACG00000013178	rnf113a	93	82.000	ENSACLG00000025256	rnf113a	93	82.667	Astatotilapia_calliptera
ENSLACG00000013178	rnf113a	96	79.100	ENSAMXG00000011273	rnf113a	97	79.421	Astyanax_mexicanus
ENSLACG00000013178	rnf113a	96	72.642	ENSBTAG00000006034	RNF113A	93	75.157	Bos_taurus
ENSLACG00000013178	rnf113a	96	66.871	ENSBTAG00000008684	-	93	67.692	Bos_taurus
ENSLACG00000013178	rnf113a	91	48.852	WBGene00010476	rnf-113	80	47.249	Caenorhabditis_elegans
ENSLACG00000013178	rnf113a	94	63.754	ENSCJAG00000004501	RNF113B	94	63.344	Callithrix_jacchus
ENSLACG00000013178	rnf113a	96	72.327	ENSCJAG00000022327	RNF113A	93	73.270	Callithrix_jacchus
ENSLACG00000013178	rnf113a	99	60.534	ENSCAFG00000018373	-	96	61.128	Canis_familiaris
ENSLACG00000013178	rnf113a	96	71.207	ENSCAFG00000018430	-	93	72.136	Canis_familiaris
ENSLACG00000013178	rnf113a	99	60.237	ENSCAFG00020020280	-	96	61.424	Canis_lupus_dingo
ENSLACG00000013178	rnf113a	96	71.207	ENSCAFG00020004044	-	93	72.136	Canis_lupus_dingo
ENSLACG00000013178	rnf113a	96	69.108	ENSCHIG00000015616	-	93	68.868	Capra_hircus
ENSLACG00000013178	rnf113a	96	72.956	ENSCHIG00000018820	-	93	75.472	Capra_hircus
ENSLACG00000013178	rnf113a	99	70.091	ENSTSYG00000001308	RNF113A	96	71.903	Carlito_syrichta
ENSLACG00000013178	rnf113a	97	74.375	ENSCPOG00000038517	-	99	71.557	Cavia_porcellus
ENSLACG00000013178	rnf113a	96	72.327	ENSCCAG00000013617	RNF113A	93	73.270	Cebus_capucinus
ENSLACG00000013178	rnf113a	92	65.017	ENSCCAG00000021327	RNF113B	92	64.590	Cebus_capucinus
ENSLACG00000013178	rnf113a	99	71.903	ENSCATG00000002702	RNF113A	96	72.810	Cercocebus_atys
ENSLACG00000013178	rnf113a	96	74.295	ENSCLAG00000017479	-	93	73.832	Chinchilla_lanigera
ENSLACG00000013178	rnf113a	94	62.338	ENSCSAG00000000222	RNF113B	90	61.489	Chlorocebus_sabaeus
ENSLACG00000013178	rnf113a	99	62.195	ENSCSAG00000019472	-	97	61.329	Chlorocebus_sabaeus
ENSLACG00000013178	rnf113a	79	69.847	ENSCHOG00000008711	-	99	70.455	Choloepus_hoffmanni
ENSLACG00000013178	rnf113a	97	76.266	ENSCPBG00000026980	-	98	76.266	Chrysemys_picta_bellii
ENSLACG00000013178	rnf113a	91	63.158	ENSCING00000009197	-	94	65.246	Ciona_intestinalis
ENSLACG00000013178	rnf113a	83	66.667	ENSCSAVG00000006210	-	93	62.791	Ciona_savignyi
ENSLACG00000013178	rnf113a	94	60.518	ENSCANG00000041552	RNF113B	95	60.518	Colobus_angolensis_palliatus
ENSLACG00000013178	rnf113a	96	73.585	ENSCANG00000037715	RNF113A	93	74.528	Colobus_angolensis_palliatus
ENSLACG00000013178	rnf113a	97	72.414	ENSCGRG00001002251	Rnf113a1	94	72.586	Cricetulus_griseus_chok1gshd
ENSLACG00000013178	rnf113a	100	70.909	ENSCGRG00000019441	Rnf113a1	94	72.274	Cricetulus_griseus_crigri
ENSLACG00000013178	rnf113a	97	70.000	ENSCGRG00000016675	Rnf113a2	95	71.250	Cricetulus_griseus_crigri
ENSLACG00000013178	rnf113a	99	76.161	ENSCSEG00000021570	rnf113a	86	76.161	Cynoglossus_semilaevis
ENSLACG00000013178	rnf113a	96	80.769	ENSCVAG00000011305	rnf113a	97	80.769	Cyprinodon_variegatus
ENSLACG00000013178	rnf113a	99	78.019	ENSDARG00000037930	rnf113a	100	78.638	Danio_rerio
ENSLACG00000013178	rnf113a	96	72.013	ENSDORG00000027624	Rnf113a2	94	72.013	Dipodomys_ordii
ENSLACG00000013178	rnf113a	93	58.675	FBgn0038772	mdlc	93	56.456	Drosophila_melanogaster
ENSLACG00000013178	rnf113a	99	69.789	ENSETEG00000018346	-	97	69.670	Echinops_telfairi
ENSLACG00000013178	rnf113a	100	73.148	ENSEBUG00000016079	rnf113a	99	73.148	Eptatretus_burgeri
ENSLACG00000013178	rnf113a	96	68.966	ENSEASG00005010538	-	93	69.906	Equus_asinus_asinus
ENSLACG00000013178	rnf113a	95	70.662	ENSECAG00000004638	-	99	70.662	Equus_caballus
ENSLACG00000013178	rnf113a	96	73.041	ENSECAG00000003934	-	93	73.041	Equus_caballus
ENSLACG00000013178	rnf113a	96	78.457	ENSELUG00000020657	rnf113a	97	78.457	Esox_lucius
ENSLACG00000013178	rnf113a	96	72.414	ENSFCAG00000028962	-	93	72.188	Felis_catus
ENSLACG00000013178	rnf113a	96	72.956	ENSFCAG00000025700	-	99	69.591	Felis_catus
ENSLACG00000013178	rnf113a	96	72.642	ENSFCAG00000024392	-	96	69.298	Felis_catus
ENSLACG00000013178	rnf113a	85	82.014	ENSFALG00000004633	-	95	78.966	Ficedula_albicollis
ENSLACG00000013178	rnf113a	96	81.090	ENSFHEG00000023305	rnf113a	97	81.090	Fundulus_heteroclitus
ENSLACG00000013178	rnf113a	94	77.532	ENSGMOG00000004541	rnf113a	95	77.532	Gadus_morhua
ENSLACG00000013178	rnf113a	97	76.250	ENSGALG00000000538	RNF113A	98	75.312	Gallus_gallus
ENSLACG00000013178	rnf113a	100	76.923	ENSGAFG00000011863	rnf113a	100	76.923	Gambusia_affinis
ENSLACG00000013178	rnf113a	92	80.263	ENSGACG00000009738	rnf113a	92	80.263	Gasterosteus_aculeatus
ENSLACG00000013178	rnf113a	97	76.582	ENSGAGG00000020490	-	98	76.582	Gopherus_agassizii
ENSLACG00000013178	rnf113a	96	73.585	ENSGGOG00000002324	RNF113A	93	74.528	Gorilla_gorilla
ENSLACG00000013178	rnf113a	94	61.165	ENSGGOG00000023052	RNF113B	94	60.645	Gorilla_gorilla
ENSLACG00000013178	rnf113a	94	80.592	ENSHBUG00000008626	rnf113a	93	82.333	Haplochromis_burtoni
ENSLACG00000013178	rnf113a	99	70.783	ENSHGLG00000019571	-	98	70.359	Heterocephalus_glaber_female
ENSLACG00000013178	rnf113a	99	68.935	ENSHGLG00100019582	-	98	69.706	Heterocephalus_glaber_male
ENSLACG00000013178	rnf113a	96	78.846	ENSHCOG00000003421	rnf113a	96	78.846	Hippocampus_comes
ENSLACG00000013178	rnf113a	96	79.808	ENSIPUG00000013431	RNF113A	97	79.808	Ictalurus_punctatus
ENSLACG00000013178	rnf113a	96	73.041	ENSSTOG00000019866	-	93	73.125	Ictidomys_tridecemlineatus
ENSLACG00000013178	rnf113a	77	54.582	ENSJJAG00000019849	Rnf113a1	96	49.329	Jaculus_jaculus
ENSLACG00000013178	rnf113a	96	80.128	ENSKMAG00000009830	rnf113a	97	80.449	Kryptolebias_marmoratus
ENSLACG00000013178	rnf113a	99	77.090	ENSLBEG00000004627	rnf113a	100	78.019	Labrus_bergylta
ENSLACG00000013178	rnf113a	99	79.375	ENSLOCG00000011785	rnf113a	99	78.882	Lepisosteus_oculatus
ENSLACG00000013178	rnf113a	96	72.555	ENSLAFG00000013906	-	93	72.240	Loxodonta_africana
ENSLACG00000013178	rnf113a	99	71.903	ENSMFAG00000018472	RNF113A	96	72.810	Macaca_fascicularis
ENSLACG00000013178	rnf113a	99	71.903	ENSMMUG00000020223	RNF113A	96	72.810	Macaca_mulatta
ENSLACG00000013178	rnf113a	99	71.903	ENSMNEG00000019778	RNF113A	96	72.810	Macaca_nemestrina
ENSLACG00000013178	rnf113a	99	71.903	ENSMLEG00000020750	RNF113A	96	72.810	Mandrillus_leucophaeus
ENSLACG00000013178	rnf113a	75	69.672	ENSMLEG00000038757	RNF113B	81	70.539	Mandrillus_leucophaeus
ENSLACG00000013178	rnf113a	99	77.399	ENSMAMG00000021895	rnf113a	100	77.709	Mastacembelus_armatus
ENSLACG00000013178	rnf113a	93	82.000	ENSMZEG00005023086	rnf113a	93	82.667	Maylandia_zebra
ENSLACG00000013178	rnf113a	88	80.822	ENSMGAG00000001753	-	98	81.533	Meleagris_gallopavo
ENSLACG00000013178	rnf113a	96	70.662	ENSMICG00000038084	-	92	71.203	Microcebus_murinus
ENSLACG00000013178	rnf113a	96	71.875	ENSMICG00000001750	-	93	73.125	Microcebus_murinus
ENSLACG00000013178	rnf113a	96	72.240	ENSMOCG00000005370	-	91	72.956	Microtus_ochrogaster
ENSLACG00000013178	rnf113a	96	78.846	ENSMMOG00000016954	rnf113a	97	78.846	Mola_mola
ENSLACG00000013178	rnf113a	99	69.969	ENSMALG00000007938	rnf113a	100	69.969	Monopterus_albus
ENSLACG00000013178	rnf113a	99	69.605	MGP_CAROLIEiJ_G0017943	Rnf113a2	98	70.517	Mus_caroli
ENSLACG00000013178	rnf113a	96	73.186	ENSMUSG00000036537	Rnf113a1	93	73.354	Mus_musculus
ENSLACG00000013178	rnf113a	99	69.605	ENSMUSG00000098134	Rnf113a2	98	70.517	Mus_musculus
ENSLACG00000013178	rnf113a	99	69.605	MGP_PahariEiJ_G0029702	Rnf113a2	98	70.517	Mus_pahari
ENSLACG00000013178	rnf113a	100	71.818	MGP_PahariEiJ_G0031547	Rnf113a1	97	72.508	Mus_pahari
ENSLACG00000013178	rnf113a	99	69.605	MGP_SPRETEiJ_G0018788	Rnf113a2	98	70.517	Mus_spretus
ENSLACG00000013178	rnf113a	96	73.186	MGP_SPRETEiJ_G0034156	Rnf113a1	93	73.354	Mus_spretus
ENSLACG00000013178	rnf113a	93	72.204	ENSMPUG00000019358	-	90	74.441	Mustela_putorius_furo
ENSLACG00000013178	rnf113a	98	69.605	ENSMLUG00000016812	-	95	70.821	Myotis_lucifugus
ENSLACG00000013178	rnf113a	96	70.312	ENSMLUG00000010856	-	93	70.497	Myotis_lucifugus
ENSLACG00000013178	rnf113a	97	78.981	ENSNBRG00000004314	rnf113a	96	80.645	Neolamprologus_brichardi
ENSLACG00000013178	rnf113a	96	73.585	ENSNLEG00000018333	RNF113A	93	74.214	Nomascus_leucogenys
ENSLACG00000013178	rnf113a	94	62.338	ENSNLEG00000007844	RNF113B	94	61.613	Nomascus_leucogenys
ENSLACG00000013178	rnf113a	94	74.051	ENSMEUG00000001855	-	95	75.316	Notamacropus_eugenii
ENSLACG00000013178	rnf113a	94	80.263	ENSONIG00000000741	rnf113a	93	82.000	Oreochromis_niloticus
ENSLACG00000013178	rnf113a	94	74.754	ENSOANG00000002592	-	91	74.754	Ornithorhynchus_anatinus
ENSLACG00000013178	rnf113a	97	71.827	ENSOCUG00000016207	-	94	71.827	Oryctolagus_cuniculus
ENSLACG00000013178	rnf113a	95	79.677	ENSORLG00000002442	rnf113a	96	79.677	Oryzias_latipes
ENSLACG00000013178	rnf113a	95	79.355	ENSORLG00020011512	rnf113a	96	79.355	Oryzias_latipes_hni
ENSLACG00000013178	rnf113a	95	79.677	ENSORLG00015004382	rnf113a	96	79.677	Oryzias_latipes_hsok
ENSLACG00000013178	rnf113a	99	78.328	ENSOMEG00000020197	rnf113a	100	78.328	Oryzias_melastigma
ENSLACG00000013178	rnf113a	96	72.152	ENSOGAG00000011638	RNF113B	98	68.249	Otolemur_garnettii
ENSLACG00000013178	rnf113a	97	72.446	ENSOGAG00000031602	RNF113A	98	69.617	Otolemur_garnettii
ENSLACG00000013178	rnf113a	96	67.081	ENSOARG00000015294	-	93	67.913	Ovis_aries
ENSLACG00000013178	rnf113a	96	72.956	ENSOARG00000009771	-	93	75.472	Ovis_aries
ENSLACG00000013178	rnf113a	94	61.489	ENSPPAG00000040641	RNF113B	94	60.968	Pan_paniscus
ENSLACG00000013178	rnf113a	96	73.585	ENSPPAG00000009537	RNF113A	93	74.528	Pan_paniscus
ENSLACG00000013178	rnf113a	96	72.956	ENSPPRG00000011512	-	99	69.591	Panthera_pardus
ENSLACG00000013178	rnf113a	96	72.327	ENSPPRG00000020640	-	92	72.327	Panthera_pardus
ENSLACG00000013178	rnf113a	96	72.956	ENSPTIG00000007986	-	99	69.591	Panthera_tigris_altaica
ENSLACG00000013178	rnf113a	94	61.489	ENSPTRG00000005987	RNF113B	94	60.968	Pan_troglodytes
ENSLACG00000013178	rnf113a	96	73.585	ENSPTRG00000022231	RNF113A	93	74.528	Pan_troglodytes
ENSLACG00000013178	rnf113a	99	71.903	ENSPANG00000011522	RNF113A	96	72.810	Papio_anubis
ENSLACG00000013178	rnf113a	96	79.808	ENSPKIG00000016796	rnf113a	97	79.808	Paramormyrops_kingsleyae
ENSLACG00000013178	rnf113a	88	81.185	ENSPSIG00000012676	-	99	81.533	Pelodiscus_sinensis
ENSLACG00000013178	rnf113a	99	75.617	ENSPMGG00000009668	rnf113a	99	75.617	Periophthalmus_magnuspinnatus
ENSLACG00000013178	rnf113a	96	72.956	ENSPEMG00000002490	Rnf113a1	93	72.956	Peromyscus_maniculatus_bairdii
ENSLACG00000013178	rnf113a	88	76.140	ENSPMAG00000005184	rnf113a	96	76.140	Petromyzon_marinus
ENSLACG00000013178	rnf113a	94	73.832	ENSPCIG00000028916	-	91	75.078	Phascolarctos_cinereus
ENSLACG00000013178	rnf113a	99	78.019	ENSPFOG00000014248	rnf113a	99	78.019	Poecilia_formosa
ENSLACG00000013178	rnf113a	99	77.709	ENSPLAG00000010435	rnf113a	99	77.709	Poecilia_latipinna
ENSLACG00000013178	rnf113a	99	78.638	ENSPMEG00000010641	rnf113a	99	78.638	Poecilia_mexicana
ENSLACG00000013178	rnf113a	99	78.328	ENSPREG00000009900	rnf113a	99	78.328	Poecilia_reticulata
ENSLACG00000013178	rnf113a	92	63.696	ENSPPYG00000005460	RNF113B	93	62.951	Pongo_abelii
ENSLACG00000013178	rnf113a	96	73.585	ENSPPYG00000020676	RNF113A	93	74.528	Pongo_abelii
ENSLACG00000013178	rnf113a	96	72.381	ENSPCAG00000014633	-	92	72.555	Procavia_capensis
ENSLACG00000013178	rnf113a	93	69.677	ENSPCOG00000005671	-	93	68.923	Propithecus_coquereli
ENSLACG00000013178	rnf113a	93	82.000	ENSPNYG00000013863	rnf113a	93	82.667	Pundamilia_nyererei
ENSLACG00000013178	rnf113a	96	81.672	ENSPNAG00000017428	rnf113a	97	81.994	Pygocentrus_nattereri
ENSLACG00000013178	rnf113a	96	73.186	ENSRNOG00000059412	Rnf113a1	93	73.186	Rattus_norvegicus
ENSLACG00000013178	rnf113a	96	73.186	ENSRNOG00000034040	LOC108348079	93	73.186	Rattus_norvegicus
ENSLACG00000013178	rnf113a	92	60.726	ENSRBIG00000036094	RNF113B	92	60.912	Rhinopithecus_bieti
ENSLACG00000013178	rnf113a	96	73.585	ENSRBIG00000017389	RNF113A	93	74.528	Rhinopithecus_bieti
ENSLACG00000013178	rnf113a	92	61.056	ENSRROG00000045661	RNF113B	92	61.238	Rhinopithecus_roxellana
ENSLACG00000013178	rnf113a	96	73.585	ENSRROG00000012149	RNF113A	93	74.528	Rhinopithecus_roxellana
ENSLACG00000013178	rnf113a	96	72.013	ENSSBOG00000017704	RNF113A	93	72.956	Saimiri_boliviensis_boliviensis
ENSLACG00000013178	rnf113a	92	62.876	ENSSBOG00000029719	RNF113B	92	64.379	Saimiri_boliviensis_boliviensis
ENSLACG00000013178	rnf113a	94	75.078	ENSSHAG00000008839	-	91	75.389	Sarcophilus_harrisii
ENSLACG00000013178	rnf113a	99	80.745	ENSSFOG00015016567	rnf113a	99	80.745	Scleropages_formosus
ENSLACG00000013178	rnf113a	95	78.387	ENSSMAG00000009235	rnf113a	93	81.333	Scophthalmus_maximus
ENSLACG00000013178	rnf113a	95	79.355	ENSSDUG00000022244	rnf113a	96	80.000	Seriola_dumerili
ENSLACG00000013178	rnf113a	95	79.355	ENSSLDG00000018582	rnf113a	96	80.000	Seriola_lalandi_dorsalis
ENSLACG00000013178	rnf113a	99	70.606	ENSSARG00000010436	-	97	70.783	Sorex_araneus
ENSLACG00000013178	rnf113a	98	78.302	ENSSPUG00000018786	-	87	77.358	Sphenodon_punctatus
ENSLACG00000013178	rnf113a	95	80.449	ENSSPAG00000013187	rnf113a	96	81.410	Stegastes_partitus
ENSLACG00000013178	rnf113a	96	70.533	ENSSSCG00000032973	-	93	72.100	Sus_scrofa
ENSLACG00000013178	rnf113a	97	76.972	ENSTGUG00000001947	-	98	76.025	Taeniopygia_guttata
ENSLACG00000013178	rnf113a	98	77.882	ENSTRUG00000011142	rnf113a	99	78.505	Takifugu_rubripes
ENSLACG00000013178	rnf113a	99	78.086	ENSTNIG00000014938	rnf113a	99	78.086	Tetraodon_nigroviridis
ENSLACG00000013178	rnf113a	95	73.101	ENSTBEG00000012687	-	92	73.502	Tupaia_belangeri
ENSLACG00000013178	rnf113a	96	72.013	ENSUAMG00000024564	-	94	73.438	Ursus_americanus
ENSLACG00000013178	rnf113a	93	73.786	ENSUMAG00000002167	-	93	75.484	Ursus_maritimus
ENSLACG00000013178	rnf113a	88	72.414	ENSVPAG00000004521	-	91	74.205	Vicugna_pacos
ENSLACG00000013178	rnf113a	57	66.667	ENSVVUG00000004522	-	81	58.750	Vulpes_vulpes
ENSLACG00000013178	rnf113a	96	71.207	ENSVVUG00000011662	-	93	72.136	Vulpes_vulpes
ENSLACG00000013178	rnf113a	95	76.206	ENSXETG00000002042	rnf113a	99	74.847	Xenopus_tropicalis
ENSLACG00000013178	rnf113a	95	79.288	ENSXCOG00000017542	rnf113a	98	79.288	Xiphophorus_couchianus
ENSLACG00000013178	rnf113a	99	78.019	ENSXMAG00000008169	rnf113a	99	78.019	Xiphophorus_maculatus