EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000013200 (Gene tree)
Gene ID: -
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 30306 bases
Position: chrJH126754.1:822445-852750
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000014998	Btz	PF09405.10	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015103	CASC3-201	2157	-	ENSLACP00000014998	719 (aa)	-	H3AZC7

Gene Model

Click here to download ENSLACG00000013200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013200	CASC3	99	55.785	ENSG00000108349	CASC3	98	56.783	Homo_sapiens
ENSLACG00000013200	CASC3	71	51.935	ENSAPOG00000008467	casc3	76	50.637	Acanthochromis_polyacanthus
ENSLACG00000013200	CASC3	99	57.103	ENSAMEG00000007764	CASC3	90	61.598	Ailuropoda_melanoleuca
ENSLACG00000013200	CASC3	75	43.876	ENSACIG00000000720	casc3	80	43.580	Amphilophus_citrinellus
ENSLACG00000013200	CASC3	71	51.290	ENSAPEG00000006787	casc3	75	50.479	Amphiprion_percula
ENSLACG00000013200	CASC3	74	50.595	ENSATEG00000017196	casc3	77	50.000	Anabas_testudineus
ENSLACG00000013200	CASC3	89	61.810	ENSACAG00000002674	CASC3	85	62.500	Anolis_carolinensis
ENSLACG00000013200	CASC3	84	65.372	ENSANAG00000034820	-	95	62.654	Aotus_nancymaae
ENSLACG00000013200	CASC3	65	74.528	ENSANAG00000031954	-	97	76.190	Aotus_nancymaae
ENSLACG00000013200	CASC3	99	44.388	ENSAMXG00000032452	casc3	98	44.136	Astyanax_mexicanus
ENSLACG00000013200	CASC3	99	58.127	ENSBTAG00000006250	CASC3	90	60.583	Bos_taurus
ENSLACG00000013200	CASC3	99	55.586	ENSCJAG00000016032	CASC3	98	56.923	Callithrix_jacchus
ENSLACG00000013200	CASC3	99	56.612	ENSCAFG00000016141	CASC3	90	61.043	Canis_familiaris
ENSLACG00000013200	CASC3	99	55.846	ENSCAFG00020018882	CASC3	84	66.667	Canis_lupus_dingo
ENSLACG00000013200	CASC3	99	57.517	ENSCHIG00000006338	CASC3	88	60.506	Capra_hircus
ENSLACG00000013200	CASC3	87	58.230	ENSTSYG00000002975	CASC3	87	60.597	Carlito_syrichta
ENSLACG00000013200	CASC3	86	57.484	ENSCAPG00000010514	CASC3	99	57.803	Cavia_aperea
ENSLACG00000013200	CASC3	99	54.696	ENSCPOG00000015139	CASC3	88	57.845	Cavia_porcellus
ENSLACG00000013200	CASC3	89	58.384	ENSCCAG00000033620	CASC3	90	60.061	Cebus_capucinus
ENSLACG00000013200	CASC3	99	56.474	ENSCATG00000033593	CASC3	98	57.483	Cercocebus_atys
ENSLACG00000013200	CASC3	99	53.899	ENSCLAG00000013730	CASC3	98	56.303	Chinchilla_lanigera
ENSLACG00000013200	CASC3	99	56.474	ENSCSAG00000002777	CASC3	98	57.483	Chlorocebus_sabaeus
ENSLACG00000013200	CASC3	99	60.082	ENSCPBG00000004750	CASC3	94	66.244	Chrysemys_picta_bellii
ENSLACG00000013200	CASC3	99	56.336	ENSCANG00000008814	CASC3	98	57.203	Colobus_angolensis_palliatus
ENSLACG00000013200	CASC3	89	59.265	ENSCGRG00001014706	Casc3	88	60.794	Cricetulus_griseus_chok1gshd
ENSLACG00000013200	CASC3	90	58.371	ENSCGRG00000001952	Casc3	94	60.759	Cricetulus_griseus_crigri
ENSLACG00000013200	CASC3	82	52.090	ENSCSEG00000010047	casc3	76	49.383	Cynoglossus_semilaevis
ENSLACG00000013200	CASC3	73	51.376	ENSCVAG00000014935	casc3	99	41.479	Cyprinodon_variegatus
ENSLACG00000013200	CASC3	85	53.709	ENSDARG00000029911	casc3	79	54.438	Danio_rerio
ENSLACG00000013200	CASC3	99	57.438	ENSDNOG00000017249	CASC3	94	58.182	Dasypus_novemcinctus
ENSLACG00000013200	CASC3	99	54.621	ENSETEG00000013720	CASC3	98	55.245	Echinops_telfairi
ENSLACG00000013200	CASC3	87	34.298	ENSEBUG00000010654	casc3	88	33.819	Eptatretus_burgeri
ENSLACG00000013200	CASC3	99	56.379	ENSEASG00005002909	CASC3	85	65.766	Equus_asinus_asinus
ENSLACG00000013200	CASC3	99	56.868	ENSECAG00000019947	CASC3	79	60.276	Equus_caballus
ENSLACG00000013200	CASC3	63	50.870	ENSEEUG00000014253	CASC3	84	52.262	Erinaceus_europaeus
ENSLACG00000013200	CASC3	86	55.077	ENSELUG00000015093	casc3	80	54.462	Esox_lucius
ENSLACG00000013200	CASC3	99	56.474	ENSFCAG00000014998	CASC3	98	56.583	Felis_catus
ENSLACG00000013200	CASC3	87	56.923	ENSFALG00000000412	CASC3	97	58.942	Ficedula_albicollis
ENSLACG00000013200	CASC3	91	54.925	ENSFDAG00000020696	CASC3	94	58.228	Fukomys_damarensis
ENSLACG00000013200	CASC3	73	51.368	ENSFHEG00000015793	casc3	99	39.581	Fundulus_heteroclitus
ENSLACG00000013200	CASC3	88	61.215	ENSGALG00000031813	CASC3	93	62.124	Gallus_gallus
ENSLACG00000013200	CASC3	72	49.359	ENSGAFG00000017148	casc3	69	47.188	Gambusia_affinis
ENSLACG00000013200	CASC3	88	62.675	ENSGAGG00000008432	CASC3	92	74.118	Gopherus_agassizii
ENSLACG00000013200	CASC3	99	56.164	ENSGGOG00000005067	CASC3	90	59.451	Gorilla_gorilla
ENSLACG00000013200	CASC3	99	54.870	ENSHGLG00000012117	CASC3	98	54.393	Heterocephalus_glaber_female
ENSLACG00000013200	CASC3	87	56.988	ENSHGLG00100002268	CASC3	98	58.019	Heterocephalus_glaber_male
ENSLACG00000013200	CASC3	99	44.444	ENSIPUG00000002679	casc3	98	45.791	Ictalurus_punctatus
ENSLACG00000013200	CASC3	99	56.831	ENSSTOG00000006374	CASC3	98	56.407	Ictidomys_tridecemlineatus
ENSLACG00000013200	CASC3	91	58.296	ENSJJAG00000023525	Casc3	90	58.636	Jaculus_jaculus
ENSLACG00000013200	CASC3	63	58.750	ENSKMAG00000019507	casc3	77	46.628	Kryptolebias_marmoratus
ENSLACG00000013200	CASC3	66	52.778	ENSLBEG00000005435	casc3	79	46.686	Labrus_bergylta
ENSLACG00000013200	CASC3	73	75.610	ENSLOCG00000013518	casc3	69	73.659	Lepisosteus_oculatus
ENSLACG00000013200	CASC3	99	56.198	ENSLAFG00000000606	CASC3	90	60.123	Loxodonta_africana
ENSLACG00000013200	CASC3	99	56.474	ENSMFAG00000041496	CASC3	98	57.483	Macaca_fascicularis
ENSLACG00000013200	CASC3	99	56.474	ENSMMUG00000045187	CASC3	98	57.483	Macaca_mulatta
ENSLACG00000013200	CASC3	87	59.062	ENSMLEG00000029049	CASC3	97	60.348	Mandrillus_leucophaeus
ENSLACG00000013200	CASC3	83	50.313	ENSMAMG00000005235	casc3	69	48.071	Mastacembelus_armatus
ENSLACG00000013200	CASC3	85	60.353	ENSMGAG00000013247	CASC3	99	62.063	Meleagris_gallopavo
ENSLACG00000013200	CASC3	69	63.189	ENSMAUG00000006023	Casc3	79	62.574	Mesocricetus_auratus
ENSLACG00000013200	CASC3	99	56.967	ENSMICG00000003321	CASC3	98	57.997	Microcebus_murinus
ENSLACG00000013200	CASC3	89	60.276	ENSMOCG00000013644	Casc3	87	60.635	Microtus_ochrogaster
ENSLACG00000013200	CASC3	80	50.000	ENSMMOG00000014339	casc3	99	39.549	Mola_mola
ENSLACG00000013200	CASC3	99	54.247	ENSMODG00000013044	CASC3	81	60.000	Monodelphis_domestica
ENSLACG00000013200	CASC3	55	66.667	ENSMALG00000019771	casc3	81	43.682	Monopterus_albus
ENSLACG00000013200	CASC3	89	58.986	MGP_CAROLIEiJ_G0017099	Casc3	87	59.335	Mus_caroli
ENSLACG00000013200	CASC3	89	58.372	ENSMUSG00000078676	Casc3	87	58.703	Mus_musculus
ENSLACG00000013200	CASC3	89	58.679	MGP_SPRETEiJ_G0017943	Casc3	87	59.019	Mus_spretus
ENSLACG00000013200	CASC3	99	57.241	ENSMPUG00000014903	CASC3	90	60.983	Mustela_putorius_furo
ENSLACG00000013200	CASC3	99	56.456	ENSMLUG00000010520	CASC3	90	60.583	Myotis_lucifugus
ENSLACG00000013200	CASC3	99	55.769	ENSNGAG00000023121	Casc3	89	58.293	Nannospalax_galili
ENSLACG00000013200	CASC3	99	55.830	ENSNLEG00000001598	CASC3	90	59.695	Nomascus_leucogenys
ENSLACG00000013200	CASC3	80	76.871	ENSMEUG00000015662	CASC3	87	50.085	Notamacropus_eugenii
ENSLACG00000013200	CASC3	74	48.598	ENSOPRG00000007240	-	74	49.331	Ochotona_princeps
ENSLACG00000013200	CASC3	99	55.495	ENSODEG00000017858	CASC3	98	56.583	Octodon_degus
ENSLACG00000013200	CASC3	79	37.182	ENSOANG00000003499	-	99	37.479	Ornithorhynchus_anatinus
ENSLACG00000013200	CASC3	99	57.123	ENSOCUG00000002954	CASC3	90	60.061	Oryctolagus_cuniculus
ENSLACG00000013200	CASC3	72	51.613	ENSORLG00000023125	casc3	80	50.323	Oryzias_latipes
ENSLACG00000013200	CASC3	99	55.846	ENSOGAG00000034486	CASC3	89	60.031	Otolemur_garnettii
ENSLACG00000013200	CASC3	99	57.851	ENSOARG00000013239	CASC3	90	60.276	Ovis_aries
ENSLACG00000013200	CASC3	99	55.785	ENSPPAG00000035069	CASC3	98	56.783	Pan_paniscus
ENSLACG00000013200	CASC3	99	56.612	ENSPPRG00000023670	CASC3	98	56.723	Panthera_pardus
ENSLACG00000013200	CASC3	89	58.833	ENSPTIG00000010891	CASC3	87	60.506	Panthera_tigris_altaica
ENSLACG00000013200	CASC3	99	56.474	ENSPANG00000021708	CASC3	98	57.622	Papio_anubis
ENSLACG00000013200	CASC3	87	47.265	ENSPKIG00000023186	casc3	90	47.059	Paramormyrops_kingsleyae
ENSLACG00000013200	CASC3	89	60.153	ENSPEMG00000009774	Casc3	88	60.635	Peromyscus_maniculatus_bairdii
ENSLACG00000013200	CASC3	99	56.887	ENSPCIG00000025678	CASC3	88	61.830	Phascolarctos_cinereus
ENSLACG00000013200	CASC3	88	43.721	ENSPFOG00000017632	casc3	100	42.134	Poecilia_formosa
ENSLACG00000013200	CASC3	73	52.188	ENSPLAG00000005268	casc3	79	51.090	Poecilia_latipinna
ENSLACG00000013200	CASC3	59	40.416	ENSPMEG00000010299	casc3	70	41.244	Poecilia_mexicana
ENSLACG00000013200	CASC3	60	56.522	ENSPREG00000011856	casc3	79	45.037	Poecilia_reticulata
ENSLACG00000013200	CASC3	99	56.121	ENSPPYG00000008467	CASC3	98	56.923	Pongo_abelii
ENSLACG00000013200	CASC3	99	57.650	ENSPCOG00000008183	CASC3	98	58.414	Propithecus_coquereli
ENSLACG00000013200	CASC3	99	56.181	ENSPVAG00000008556	CASC3	90	60.276	Pteropus_vampyrus
ENSLACG00000013200	CASC3	78	66.467	ENSRNOG00000009716	Casc3	84	66.767	Rattus_norvegicus
ENSLACG00000013200	CASC3	99	56.474	ENSRBIG00000033289	CASC3	88	59.937	Rhinopithecus_bieti
ENSLACG00000013200	CASC3	99	56.474	ENSRROG00000022337	CASC3	98	57.483	Rhinopithecus_roxellana
ENSLACG00000013200	CASC3	86	57.795	ENSSBOG00000031406	CASC3	97	59.528	Saimiri_boliviensis_boliviensis
ENSLACG00000013200	CASC3	87	59.906	ENSSHAG00000013338	CASC3	98	61.041	Sarcophilus_harrisii
ENSLACG00000013200	CASC3	99	46.526	ENSSFOG00015002645	casc3	91	47.109	Scleropages_formosus
ENSLACG00000013200	CASC3	72	50.000	ENSSMAG00000016096	casc3	77	49.547	Scophthalmus_maximus
ENSLACG00000013200	CASC3	74	45.378	ENSSDUG00000016893	casc3	95	39.061	Seriola_dumerili
ENSLACG00000013200	CASC3	61	61.607	ENSSARG00000010378	CASC3	87	61.161	Sorex_araneus
ENSLACG00000013200	CASC3	84	52.484	ENSSPAG00000023008	casc3	76	51.242	Stegastes_partitus
ENSLACG00000013200	CASC3	87	60.686	ENSSSCG00000017477	CASC3	97	60.883	Sus_scrofa
ENSLACG00000013200	CASC3	72	62.214	ENSTGUG00000002300	CASC3	98	63.931	Taeniopygia_guttata
ENSLACG00000013200	CASC3	68	51.295	ENSTNIG00000003208	casc3	99	41.208	Tetraodon_nigroviridis
ENSLACG00000013200	CASC3	65	77.251	ENSTBEG00000017459	CASC3	56	77.725	Tupaia_belangeri
ENSLACG00000013200	CASC3	75	58.929	ENSTTRG00000016896	CASC3	88	59.821	Tursiops_truncatus
ENSLACG00000013200	CASC3	86	69.677	ENSUAMG00000015116	CASC3	84	67.568	Ursus_americanus
ENSLACG00000013200	CASC3	87	59.006	ENSUMAG00000017697	CASC3	97	67.868	Ursus_maritimus
ENSLACG00000013200	CASC3	59	76.471	ENSVPAG00000000799	CASC3	59	74.790	Vicugna_pacos
ENSLACG00000013200	CASC3	99	56.474	ENSVVUG00000000997	CASC3	90	60.583	Vulpes_vulpes
ENSLACG00000013200	CASC3	88	54.969	ENSXETG00000024395	casc3	98	54.294	Xenopus_tropicalis
ENSLACG00000013200	CASC3	66	52.830	ENSXMAG00000013937	casc3	79	50.779	Xiphophorus_maculatus