EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000013362 (Gene tree)
Gene ID: 102354336
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 6540 bases
Position: chrJH127277.1:848005-854544
Accession: 102354336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015178	zf-C2H2	PF00096.26	6.8e-29	1	6
ENSLACP00000015178	zf-C2H2	PF00096.26	6.8e-29	2	6
ENSLACP00000015178	zf-C2H2	PF00096.26	6.8e-29	3	6
ENSLACP00000015178	zf-C2H2	PF00096.26	6.8e-29	4	6
ENSLACP00000015178	zf-C2H2	PF00096.26	6.8e-29	5	6
ENSLACP00000015178	zf-C2H2	PF00096.26	6.8e-29	6	6
ENSLACP00000015178	zf-met	PF12874.7	2.2e-08	1	2
ENSLACP00000015178	zf-met	PF12874.7	2.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015284	GFI1-201	1221	XM_006001601	ENSLACP00000015178	406 (aa)	XP_006001663	H3AZV7

Gene Model

Click here to download ENSLACG00000013362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000013362	GFI1	98	50.614	ENSLACG00000012207	GFI1B	100	50.614
ENSLACG00000013362	GFI1	63	42.105	ENSLACG00000022211	-	86	42.105
ENSLACG00000013362	GFI1	97	37.037	ENSLACG00000003588	SCRT1	52	37.037
ENSLACG00000013362	GFI1	50	43.558	ENSLACG00000017381	-	86	43.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013362	GFI1	98	69.767	ENSG00000162676	GFI1	100	69.767	Homo_sapiens
ENSLACG00000013362	GFI1	98	66.833	ENSAPOG00000015189	gfi1ab	100	67.082	Acanthochromis_polyacanthus
ENSLACG00000013362	GFI1	98	66.667	ENSACIG00000016354	gfi1ab	100	67.734	Amphilophus_citrinellus
ENSLACG00000013362	GFI1	98	43.287	ENSAOCG00000008339	gfi1ab	100	45.499	Amphiprion_ocellaris
ENSLACG00000013362	GFI1	98	66.833	ENSAPEG00000023870	gfi1ab	100	67.082	Amphiprion_percula
ENSLACG00000013362	GFI1	98	66.165	ENSATEG00000009167	gfi1ab	89	66.165	Anabas_testudineus
ENSLACG00000013362	GFI1	83	76.012	ENSAPLG00000015700	GFI1	99	76.012	Anas_platyrhynchos
ENSLACG00000013362	GFI1	98	72.816	ENSACAG00000004498	GFI1	100	73.058	Anolis_carolinensis
ENSLACG00000013362	GFI1	98	69.302	ENSANAG00000019656	GFI1	100	69.302	Aotus_nancymaae
ENSLACG00000013362	GFI1	99	67.568	ENSACLG00000026458	gfi1ab	94	67.568	Astatotilapia_calliptera
ENSLACG00000013362	GFI1	98	64.020	ENSAMXG00000039600	gfi1ab	100	64.020	Astyanax_mexicanus
ENSLACG00000013362	GFI1	81	66.667	ENSAMXG00000006669	GFI1	100	66.667	Astyanax_mexicanus
ENSLACG00000013362	GFI1	98	69.860	ENSBTAG00000016723	GFI1	100	69.860	Bos_taurus
ENSLACG00000013362	GFI1	98	69.070	ENSCJAG00000017609	GFI1	100	69.535	Callithrix_jacchus
ENSLACG00000013362	GFI1	98	70.000	ENSCAFG00000020155	GFI1	100	70.327	Canis_familiaris
ENSLACG00000013362	GFI1	99	69.037	ENSCAFG00020013371	GFI1	90	69.355	Canis_lupus_dingo
ENSLACG00000013362	GFI1	98	69.626	ENSCHIG00000016135	GFI1	100	69.626	Capra_hircus
ENSLACG00000013362	GFI1	98	69.014	ENSCPOG00000011727	GFI1	100	69.484	Cavia_porcellus
ENSLACG00000013362	GFI1	98	68.837	ENSCCAG00000036072	GFI1	100	69.535	Cebus_capucinus
ENSLACG00000013362	GFI1	98	70.000	ENSCATG00000037873	GFI1	100	70.000	Cercocebus_atys
ENSLACG00000013362	GFI1	98	72.208	ENSCLAG00000005915	GFI1	100	66.970	Chinchilla_lanigera
ENSLACG00000013362	GFI1	83	65.591	ENSCSAG00000001469	GFI1	100	65.591	Chlorocebus_sabaeus
ENSLACG00000013362	GFI1	98	70.000	ENSCANG00000034077	GFI1	100	70.000	Colobus_angolensis_palliatus
ENSLACG00000013362	GFI1	98	67.290	ENSCGRG00001015432	Gfi1	100	67.290	Cricetulus_griseus_chok1gshd
ENSLACG00000013362	GFI1	98	63.636	ENSCSEG00000017729	GFI1	100	63.636	Cynoglossus_semilaevis
ENSLACG00000013362	GFI1	98	64.851	ENSCVAG00000011828	gfi1ab	100	64.851	Cyprinodon_variegatus
ENSLACG00000013362	GFI1	98	58.473	ENSCVAG00000004930	GFI1	100	59.472	Cyprinodon_variegatus
ENSLACG00000013362	GFI1	98	70.398	ENSDARG00000044457	gfi1ab	100	70.896	Danio_rerio
ENSLACG00000013362	GFI1	99	67.206	ENSDNOG00000000782	GFI1	98	68.360	Dasypus_novemcinctus
ENSLACG00000013362	GFI1	98	69.626	ENSEASG00005015509	GFI1	86	69.626	Equus_asinus_asinus
ENSLACG00000013362	GFI1	83	64.754	ENSECAG00000006647	GFI1	86	64.754	Equus_caballus
ENSLACG00000013362	GFI1	98	68.545	ENSEEUG00000000198	GFI1	100	68.779	Erinaceus_europaeus
ENSLACG00000013362	GFI1	98	64.938	ENSELUG00000019033	GFI1	100	64.938	Esox_lucius
ENSLACG00000013362	GFI1	98	71.078	ENSELUG00000003015	gfi1ab	99	70.833	Esox_lucius
ENSLACG00000013362	GFI1	98	69.159	ENSFCAG00000005914	GFI1	100	69.159	Felis_catus
ENSLACG00000013362	GFI1	98	65.347	ENSFHEG00000010997	gfi1ab	100	65.347	Fundulus_heteroclitus
ENSLACG00000013362	GFI1	98	59.857	ENSFHEG00000000341	GFI1	100	63.107	Fundulus_heteroclitus
ENSLACG00000013362	GFI1	98	65.750	ENSGMOG00000007737	gfi1ab	100	65.750	Gadus_morhua
ENSLACG00000013362	GFI1	98	73.827	ENSGALG00000043650	GFI1	100	73.827	Gallus_gallus
ENSLACG00000013362	GFI1	98	59.005	ENSGAFG00000018063	GFI1	100	60.333	Gambusia_affinis
ENSLACG00000013362	GFI1	98	65.770	ENSGAFG00000016637	gfi1ab	100	65.770	Gambusia_affinis
ENSLACG00000013362	GFI1	98	68.395	ENSGACG00000004257	gfi1ab	97	68.395	Gasterosteus_aculeatus
ENSLACG00000013362	GFI1	98	69.767	ENSGGOG00000005320	GFI1	100	69.767	Gorilla_gorilla
ENSLACG00000013362	GFI1	98	67.000	ENSHBUG00000011969	gfi1ab	100	67.000	Haplochromis_burtoni
ENSLACG00000013362	GFI1	98	68.545	ENSHGLG00000008020	GFI1	100	69.484	Heterocephalus_glaber_female
ENSLACG00000013362	GFI1	98	68.545	ENSHGLG00100000610	GFI1	100	69.484	Heterocephalus_glaber_male
ENSLACG00000013362	GFI1	98	60.100	ENSHCOG00000019555	GFI1	100	63.481	Hippocampus_comes
ENSLACG00000013362	GFI1	98	54.502	ENSHCOG00000008590	gfi1ab	100	54.265	Hippocampus_comes
ENSLACG00000013362	GFI1	98	66.833	ENSIPUG00000010071	gfi1ab	87	66.833	Ictalurus_punctatus
ENSLACG00000013362	GFI1	98	63.793	ENSIPUG00000013414	GFI1	100	63.547	Ictalurus_punctatus
ENSLACG00000013362	GFI1	98	69.860	ENSSTOG00000014583	GFI1	100	69.860	Ictidomys_tridecemlineatus
ENSLACG00000013362	GFI1	98	67.327	ENSKMAG00000003810	gfi1ab	100	67.327	Kryptolebias_marmoratus
ENSLACG00000013362	GFI1	98	67.079	ENSLBEG00000027776	gfi1ab	100	67.327	Labrus_bergylta
ENSLACG00000013362	GFI1	98	75.312	ENSLOCG00000004711	gfi1ab	100	75.312	Lepisosteus_oculatus
ENSLACG00000013362	GFI1	98	68.483	ENSLAFG00000018346	GFI1	100	68.483	Loxodonta_africana
ENSLACG00000013362	GFI1	98	70.000	ENSMFAG00000045801	GFI1	100	70.000	Macaca_fascicularis
ENSLACG00000013362	GFI1	98	70.000	ENSMNEG00000036338	GFI1	100	70.000	Macaca_nemestrina
ENSLACG00000013362	GFI1	98	70.000	ENSMLEG00000036181	GFI1	100	70.000	Mandrillus_leucophaeus
ENSLACG00000013362	GFI1	98	68.473	ENSMAMG00000008125	gfi1ab	100	68.473	Mastacembelus_armatus
ENSLACG00000013362	GFI1	98	68.238	ENSMZEG00005009895	gfi1ab	100	68.238	Maylandia_zebra
ENSLACG00000013362	GFI1	84	75.793	ENSMGAG00000008187	GFI1	100	75.793	Meleagris_gallopavo
ENSLACG00000013362	GFI1	98	68.925	ENSMICG00000047208	GFI1	100	68.925	Microcebus_murinus
ENSLACG00000013362	GFI1	98	63.772	ENSMMOG00000005556	gfi1ab	100	63.772	Mola_mola
ENSLACG00000013362	GFI1	98	70.139	ENSMODG00000011802	GFI1	100	70.755	Monodelphis_domestica
ENSLACG00000013362	GFI1	98	66.667	ENSMALG00000014672	gfi1ab	100	66.667	Monopterus_albus
ENSLACG00000013362	GFI1	99	67.202	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSLACG00000013362	GFI1	99	68.349	ENSMUSG00000029275	Gfi1	100	68.692	Mus_musculus
ENSLACG00000013362	GFI1	99	67.202	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSLACG00000013362	GFI1	99	67.431	MGP_SPRETEiJ_G0028507	Gfi1	100	67.991	Mus_spretus
ENSLACG00000013362	GFI1	98	70.792	ENSMPUG00000004178	GFI1	97	70.792	Mustela_putorius_furo
ENSLACG00000013362	GFI1	98	68.075	ENSMLUG00000015191	GFI1	97	69.014	Myotis_lucifugus
ENSLACG00000013362	GFI1	98	67.488	ENSNBRG00000015774	gfi1ab	100	67.488	Neolamprologus_brichardi
ENSLACG00000013362	GFI1	84	71.968	ENSNLEG00000010470	GFI1	92	71.968	Nomascus_leucogenys
ENSLACG00000013362	GFI1	98	68.458	ENSOPRG00000001473	GFI1	100	68.458	Ochotona_princeps
ENSLACG00000013362	GFI1	98	67.990	ENSONIG00000019246	gfi1ab	100	67.990	Oreochromis_niloticus
ENSLACG00000013362	GFI1	84	64.171	ENSOCUG00000023553	GFI1	93	64.439	Oryctolagus_cuniculus
ENSLACG00000013362	GFI1	98	63.054	ENSORLG00000005060	GFI1	100	63.480	Oryzias_latipes
ENSLACG00000013362	GFI1	98	66.749	ENSORLG00000013806	gfi1ab	100	66.749	Oryzias_latipes
ENSLACG00000013362	GFI1	98	66.501	ENSORLG00020001602	gfi1ab	100	66.501	Oryzias_latipes_hni
ENSLACG00000013362	GFI1	86	64.062	ENSORLG00020002817	GFI1	98	69.366	Oryzias_latipes_hni
ENSLACG00000013362	GFI1	98	61.576	ENSORLG00015006070	GFI1	100	62.010	Oryzias_latipes_hsok
ENSLACG00000013362	GFI1	98	63.433	ENSOMEG00000016722	GFI1	100	63.614	Oryzias_melastigma
ENSLACG00000013362	GFI1	98	68.922	ENSOGAG00000027913	GFI1	100	68.922	Otolemur_garnettii
ENSLACG00000013362	GFI1	98	70.075	ENSPPAG00000042186	GFI1	100	70.075	Pan_paniscus
ENSLACG00000013362	GFI1	98	69.159	ENSPPRG00000007521	GFI1	100	69.159	Panthera_pardus
ENSLACG00000013362	GFI1	98	69.535	ENSPTRG00000043053	GFI1	100	69.535	Pan_troglodytes
ENSLACG00000013362	GFI1	98	70.000	ENSPANG00000016433	GFI1	100	70.000	Papio_anubis
ENSLACG00000013362	GFI1	98	74.321	ENSPKIG00000004263	GFI1	100	74.074	Paramormyrops_kingsleyae
ENSLACG00000013362	GFI1	84	78.098	ENSPSIG00000008734	GFI1	97	78.098	Pelodiscus_sinensis
ENSLACG00000013362	GFI1	98	63.772	ENSPMGG00000012546	gfi1ab	100	63.772	Periophthalmus_magnuspinnatus
ENSLACG00000013362	GFI1	60	81.517	ENSPMGG00000011041	GFI1	77	80.569	Periophthalmus_magnuspinnatus
ENSLACG00000013362	GFI1	98	71.596	ENSPCIG00000013728	GFI1	100	71.596	Phascolarctos_cinereus
ENSLACG00000013362	GFI1	98	66.914	ENSPFOG00000023214	gfi1ab	100	66.914	Poecilia_formosa
ENSLACG00000013362	GFI1	98	66.914	ENSPLAG00000010879	gfi1ab	99	81.579	Poecilia_latipinna
ENSLACG00000013362	GFI1	99	57.209	ENSPLAG00000005376	GFI1	92	61.429	Poecilia_latipinna
ENSLACG00000013362	GFI1	98	58.373	ENSPMEG00000019299	GFI1	100	62.255	Poecilia_mexicana
ENSLACG00000013362	GFI1	98	66.914	ENSPMEG00000013694	gfi1ab	100	66.914	Poecilia_mexicana
ENSLACG00000013362	GFI1	98	65.602	ENSPREG00000014097	gfi1ab	100	65.602	Poecilia_reticulata
ENSLACG00000013362	GFI1	98	53.904	ENSPREG00000007997	GFI1	100	54.460	Poecilia_reticulata
ENSLACG00000013362	GFI1	98	57.968	ENSPCAG00000011020	GFI1	100	57.968	Procavia_capensis
ENSLACG00000013362	GFI1	98	68.458	ENSPCOG00000020540	GFI1	100	68.458	Propithecus_coquereli
ENSLACG00000013362	GFI1	98	70.118	ENSPVAG00000006928	GFI1	100	70.118	Pteropus_vampyrus
ENSLACG00000013362	GFI1	98	67.990	ENSPNYG00000021183	gfi1ab	100	67.990	Pundamilia_nyererei
ENSLACG00000013362	GFI1	98	65.664	ENSPNAG00000027258	gfi1ab	100	65.664	Pygocentrus_nattereri
ENSLACG00000013362	GFI1	98	58.981	ENSPNAG00000028014	GFI1	100	58.981	Pygocentrus_nattereri
ENSLACG00000013362	GFI1	98	68.458	ENSRNOG00000002042	Gfi1	100	68.458	Rattus_norvegicus
ENSLACG00000013362	GFI1	98	70.000	ENSRBIG00000036467	GFI1	100	70.000	Rhinopithecus_bieti
ENSLACG00000013362	GFI1	98	70.000	ENSRROG00000031687	GFI1	100	70.000	Rhinopithecus_roxellana
ENSLACG00000013362	GFI1	98	70.000	ENSSBOG00000031300	GFI1	100	70.000	Saimiri_boliviensis_boliviensis
ENSLACG00000013362	GFI1	98	73.086	ENSSFOG00015020295	gfi1	100	72.593	Scleropages_formosus
ENSLACG00000013362	GFI1	98	65.012	ENSSMAG00000002782	gfi1ab	100	65.012	Scophthalmus_maximus
ENSLACG00000013362	GFI1	98	66.334	ENSSDUG00000022410	gfi1ab	100	66.334	Seriola_dumerili
ENSLACG00000013362	GFI1	98	66.584	ENSSLDG00000020163	gfi1ab	100	66.584	Seriola_lalandi_dorsalis
ENSLACG00000013362	GFI1	77	81.818	ENSSPAG00000009140	gfi1ab	99	81.818	Stegastes_partitus
ENSLACG00000013362	GFI1	98	69.905	ENSSSCG00000006902	GFI1	100	70.616	Sus_scrofa
ENSLACG00000013362	GFI1	83	75.953	ENSTGUG00000006060	GFI1	99	75.953	Taeniopygia_guttata
ENSLACG00000013362	GFI1	98	64.589	ENSTRUG00000000415	gfi1ab	100	64.589	Takifugu_rubripes
ENSLACG00000013362	GFI1	99	61.071	ENSTNIG00000000651	gfi1ab	98	61.005	Tetraodon_nigroviridis
ENSLACG00000013362	GFI1	98	69.718	ENSTTRG00000000082	GFI1	100	70.423	Tursiops_truncatus
ENSLACG00000013362	GFI1	99	71.122	ENSUAMG00000021124	GFI1	92	71.122	Ursus_americanus
ENSLACG00000013362	GFI1	98	68.657	ENSXETG00000023006	gfi1	98	68.657	Xenopus_tropicalis
ENSLACG00000013362	GFI1	74	80.734	ENSXCOG00000013213	-	54	80.734	Xiphophorus_couchianus
ENSLACG00000013362	GFI1	98	55.241	ENSXMAG00000009274	GFI1	70	56.056	Xiphophorus_maculatus
ENSLACG00000013362	GFI1	98	65.111	ENSXMAG00000010523	gfi1ab	100	65.111	Xiphophorus_maculatus
ENSLACG00000013362	GFI1	74	43.974	ENSXMAG00000006527	-	52	58.960	Xiphophorus_maculatus