EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000013385 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 58939 bases
Position: chrJH127265.1:852470-911408
Accession: 102366190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015204	dsrm	PF00035.26	1.4e-11	1	1
ENSLACP00000015204	DND1_DSRM	PF14709.7	1e-10	1	1
ENSLACP00000015204	G-patch	PF01585.23	2.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015310	-	1547	XM_006001467	ENSLACP00000015204	489 (aa)	XP_006001529	H3AZY3

Gene Model

Click here to download ENSLACG00000013385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013385	-	91	69.624	ENSG00000159140	SON	98	65.934	Homo_sapiens
ENSLACG00000013385	-	59	56.436	ENSACIG00000017870	-	94	67.647	Amphilophus_citrinellus
ENSLACG00000013385	-	76	56.250	ENSATEG00000012732	-	56	57.632	Anabas_testudineus
ENSLACG00000013385	-	94	66.022	ENSAPLG00000008908	-	99	66.022	Anas_platyrhynchos
ENSLACG00000013385	-	90	65.611	ENSACAG00000004681	-	96	65.837	Anolis_carolinensis
ENSLACG00000013385	-	91	70.161	ENSANAG00000035426	SON	98	66.374	Aotus_nancymaae
ENSLACG00000013385	-	70	52.464	ENSACLG00000007098	-	93	52.174	Astatotilapia_calliptera
ENSLACG00000013385	-	99	70.631	ENSCJAG00000046975	SON	98	66.520	Callithrix_jacchus
ENSLACG00000013385	-	99	70.874	ENSCAFG00020025305	SON	98	66.374	Canis_lupus_dingo
ENSLACG00000013385	-	91	69.892	ENSTSYG00000008371	SON	98	66.292	Carlito_syrichta
ENSLACG00000013385	-	99	70.631	ENSCPOG00000024278	SON	98	65.714	Cavia_porcellus
ENSLACG00000013385	-	91	70.161	ENSCCAG00000030234	SON	98	66.374	Cebus_capucinus
ENSLACG00000013385	-	91	70.161	ENSCATG00000029812	SON	99	66.295	Cercocebus_atys
ENSLACG00000013385	-	99	70.631	ENSCLAG00000011776	SON	98	65.714	Chinchilla_lanigera
ENSLACG00000013385	-	80	43.216	ENSCING00000007049	-	82	44.818	Ciona_intestinalis
ENSLACG00000013385	-	91	70.161	ENSCANG00000025986	SON	99	66.295	Colobus_angolensis_palliatus
ENSLACG00000013385	-	99	70.631	ENSCGRG00001016220	Son	98	65.639	Cricetulus_griseus_chok1gshd
ENSLACG00000013385	-	83	70.631	ENSCGRG00000015260	Son	98	65.493	Cricetulus_griseus_crigri
ENSLACG00000013385	-	92	65.495	ENSDORG00000028617	-	98	65.714	Dipodomys_ordii
ENSLACG00000013385	-	73	58.168	ENSELUG00000003878	-	70	69.685	Esox_lucius
ENSLACG00000013385	-	92	66.154	ENSFCAG00000028680	-	98	66.374	Felis_catus
ENSLACG00000013385	-	97	65.208	ENSFALG00000002365	-	99	65.208	Ficedula_albicollis
ENSLACG00000013385	-	99	70.631	ENSFDAG00000019128	SON	98	65.714	Fukomys_damarensis
ENSLACG00000013385	-	91	66.816	ENSGALG00000052354	-	99	66.592	Gallus_gallus
ENSLACG00000013385	-	92	66.154	ENSGGOG00000010481	SON	98	66.374	Gorilla_gorilla
ENSLACG00000013385	-	99	70.631	ENSHGLG00000010432	SON	98	65.714	Heterocephalus_glaber_female
ENSLACG00000013385	-	99	70.631	ENSSTOG00000020593	SON	98	65.495	Ictidomys_tridecemlineatus
ENSLACG00000013385	-	92	65.419	ENSJJAG00000013491	-	98	65.639	Jaculus_jaculus
ENSLACG00000013385	-	83	69.287	ENSLOCG00000011021	-	76	68.523	Lepisosteus_oculatus
ENSLACG00000013385	-	91	70.161	ENSMFAG00000034427	SON	99	66.295	Macaca_fascicularis
ENSLACG00000013385	-	92	66.154	ENSMMUG00000005511	SON	98	66.374	Macaca_mulatta
ENSLACG00000013385	-	91	70.161	ENSMNEG00000031671	SON	99	66.295	Macaca_nemestrina
ENSLACG00000013385	-	91	70.161	ENSMLEG00000035039	SON	99	66.295	Mandrillus_leucophaeus
ENSLACG00000013385	-	83	65.693	ENSMGAG00000014526	-	93	65.693	Meleagris_gallopavo
ENSLACG00000013385	-	92	65.419	ENSMAUG00000002086	-	98	65.639	Mesocricetus_auratus
ENSLACG00000013385	-	91	70.430	ENSMICG00000033920	SON	98	66.593	Microcebus_murinus
ENSLACG00000013385	-	92	65.198	ENSMOCG00000012860	-	98	65.419	Microtus_ochrogaster
ENSLACG00000013385	-	75	56.188	ENSMALG00000006263	-	91	56.615	Monopterus_albus
ENSLACG00000013385	-	99	70.874	MGP_CAROLIEiJ_G0020965	Son	98	65.859	Mus_caroli
ENSLACG00000013385	-	99	70.874	ENSMUSG00000022961	Son	98	66.079	Mus_musculus
ENSLACG00000013385	-	99	70.874	MGP_PahariEiJ_G0016670	Son	98	65.859	Mus_pahari
ENSLACG00000013385	-	99	70.874	MGP_SPRETEiJ_G0021871	Son	98	66.079	Mus_spretus
ENSLACG00000013385	-	92	64.978	ENSNGAG00000000062	-	98	65.198	Nannospalax_galili
ENSLACG00000013385	-	91	70.161	ENSNLEG00000004002	SON	99	66.295	Nomascus_leucogenys
ENSLACG00000013385	-	92	65.714	ENSODEG00000003658	-	98	65.934	Octodon_degus
ENSLACG00000013385	-	82	58.637	ENSONIG00000003775	-	80	57.908	Oreochromis_niloticus
ENSLACG00000013385	-	73	50.275	ENSORLG00020014016	-	83	48.901	Oryzias_latipes_hni
ENSLACG00000013385	-	88	50.227	ENSORLG00015016415	-	79	49.091	Oryzias_latipes_hsok
ENSLACG00000013385	-	92	66.154	ENSPPAG00000033712	SON	98	66.374	Pan_paniscus
ENSLACG00000013385	-	91	70.430	ENSPPRG00000019353	SON	98	66.374	Panthera_pardus
ENSLACG00000013385	-	91	70.430	ENSPTIG00000017100	SON	98	66.374	Panthera_tigris_altaica
ENSLACG00000013385	-	92	66.154	ENSPTRG00000052356	-	93	76.106	Pan_troglodytes
ENSLACG00000013385	-	91	70.161	ENSPTRG00000013872	SON	98	66.374	Pan_troglodytes
ENSLACG00000013385	-	91	70.161	ENSPANG00000024077	SON	99	66.295	Papio_anubis
ENSLACG00000013385	-	98	67.909	ENSPSIG00000008097	-	99	67.909	Pelodiscus_sinensis
ENSLACG00000013385	-	73	57.703	ENSPMGG00000015598	-	80	57.584	Periophthalmus_magnuspinnatus
ENSLACG00000013385	-	92	67.253	ENSPCIG00000012884	-	98	67.473	Phascolarctos_cinereus
ENSLACG00000013385	-	91	70.430	ENSPCOG00000015502	SON	98	66.593	Propithecus_coquereli
ENSLACG00000013385	-	92	66.154	ENSRBIG00000044269	-	93	76.106	Rhinopithecus_bieti
ENSLACG00000013385	-	91	70.161	ENSRROG00000042156	SON	99	66.295	Rhinopithecus_roxellana
ENSLACG00000013385	-	91	70.161	ENSSBOG00000020885	SON	98	66.374	Saimiri_boliviensis_boliviensis
ENSLACG00000013385	-	91	64.247	ENSSHAG00000008266	SON	69	65.534	Sarcophilus_harrisii
ENSLACG00000013385	-	97	64.167	ENSTGUG00000000486	-	99	64.167	Taeniopygia_guttata
ENSLACG00000013385	-	93	54.158	ENSTNIG00000014468	-	100	53.305	Tetraodon_nigroviridis
ENSLACG00000013385	-	83	68.382	ENSXETG00000014115	son	92	68.382	Xenopus_tropicalis