EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000013399 (Gene tree)
Gene ID: 102356637
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 42228 bases
Position: chrJH126603.1:854593-896820
Accession: 102356637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015219	MMR_HSR1	PF01926.23	4.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015325	LSG1-201	5808	XM_005989369	ENSLACP00000015219	662 (aa)	XP_005989431	H3AZZ8

Gene Model

Click here to download ENSLACG00000013399's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013399	LSG1	99	65.481	ENSG00000041802	LSG1	98	75.287	Homo_sapiens
ENSLACG00000013399	LSG1	100	66.417	ENSAPOG00000009694	lsg1	100	66.717	Acanthochromis_polyacanthus
ENSLACG00000013399	LSG1	100	64.414	ENSAMEG00000009343	LSG1	100	64.918	Ailuropoda_melanoleuca
ENSLACG00000013399	LSG1	98	66.208	ENSACIG00000012406	lsg1	100	65.817	Amphilophus_citrinellus
ENSLACG00000013399	LSG1	100	65.817	ENSAOCG00000016066	lsg1	100	66.617	Amphiprion_ocellaris
ENSLACG00000013399	LSG1	90	76.680	ENSAPEG00000003252	lsg1	100	66.916	Amphiprion_percula
ENSLACG00000013399	LSG1	98	66.922	ENSATEG00000011794	lsg1	100	67.117	Anabas_testudineus
ENSLACG00000013399	LSG1	95	64.907	ENSACAG00000004222	LSG1	100	64.890	Anolis_carolinensis
ENSLACG00000013399	LSG1	99	66.467	ENSANAG00000021153	LSG1	99	66.467	Aotus_nancymaae
ENSLACG00000013399	LSG1	100	65.574	ENSACLG00000000520	lsg1	100	65.574	Astatotilapia_calliptera
ENSLACG00000013399	LSG1	100	66.216	ENSAMXG00000008271	lsg1	100	66.216	Astyanax_mexicanus
ENSLACG00000013399	LSG1	99	66.817	ENSBTAG00000008461	LSG1	99	66.817	Bos_taurus
ENSLACG00000013399	LSG1	68	46.047	WBGene00016907	C53H9.2	94	50.704	Caenorhabditis_elegans
ENSLACG00000013399	LSG1	99	65.667	ENSCJAG00000013962	LSG1	99	65.667	Callithrix_jacchus
ENSLACG00000013399	LSG1	95	65.610	ENSCAFG00000013445	LSG1	100	65.823	Canis_familiaris
ENSLACG00000013399	LSG1	100	64.018	ENSCAFG00020002216	LSG1	99	65.238	Canis_lupus_dingo
ENSLACG00000013399	LSG1	100	66.165	ENSCHIG00000015769	LSG1	100	66.466	Capra_hircus
ENSLACG00000013399	LSG1	99	64.688	ENSTSYG00000001447	LSG1	99	64.688	Carlito_syrichta
ENSLACG00000013399	LSG1	95	65.142	ENSCAPG00000009856	LSG1	99	65.079	Cavia_aperea
ENSLACG00000013399	LSG1	99	64.889	ENSCCAG00000035744	LSG1	99	65.611	Cebus_capucinus
ENSLACG00000013399	LSG1	99	66.018	ENSCATG00000042060	LSG1	99	64.820	Cercocebus_atys
ENSLACG00000013399	LSG1	99	65.913	ENSCSAG00000008796	LSG1	92	65.913	Chlorocebus_sabaeus
ENSLACG00000013399	LSG1	100	71.235	ENSCPBG00000015941	LSG1	83	71.235	Chrysemys_picta_bellii
ENSLACG00000013399	LSG1	68	59.184	ENSCING00000007079	-	96	59.184	Ciona_intestinalis
ENSLACG00000013399	LSG1	80	50.190	ENSCSAVG00000002514	-	94	60.714	Ciona_savignyi
ENSLACG00000013399	LSG1	99	65.309	ENSCANG00000030709	LSG1	99	65.309	Colobus_angolensis_palliatus
ENSLACG00000013399	LSG1	99	66.170	ENSCGRG00001019846	Lsg1	99	66.170	Cricetulus_griseus_chok1gshd
ENSLACG00000013399	LSG1	99	66.170	ENSCGRG00000014617	Lsg1	99	66.170	Cricetulus_griseus_crigri
ENSLACG00000013399	LSG1	98	65.809	ENSCSEG00000008522	lsg1	100	65.579	Cynoglossus_semilaevis
ENSLACG00000013399	LSG1	98	66.204	ENSCVAG00000002484	lsg1	100	65.172	Cyprinodon_variegatus
ENSLACG00000013399	LSG1	100	66.765	ENSDARG00000015352	lsg1	100	67.964	Danio_rerio
ENSLACG00000013399	LSG1	99	65.436	ENSDNOG00000006224	LSG1	99	65.476	Dasypus_novemcinctus
ENSLACG00000013399	LSG1	81	59.504	FBgn0266284	Ns3	91	57.874	Drosophila_melanogaster
ENSLACG00000013399	LSG1	88	73.333	ENSETEG00000003888	LSG1	89	73.333	Echinops_telfairi
ENSLACG00000013399	LSG1	89	53.987	ENSEBUG00000003119	lsg1	85	53.667	Eptatretus_burgeri
ENSLACG00000013399	LSG1	99	66.967	ENSEASG00005000678	LSG1	99	67.166	Equus_asinus_asinus
ENSLACG00000013399	LSG1	99	66.967	ENSECAG00000017659	LSG1	99	67.166	Equus_caballus
ENSLACG00000013399	LSG1	87	67.521	ENSEEUG00000015217	LSG1	87	67.521	Erinaceus_europaeus
ENSLACG00000013399	LSG1	100	64.583	ENSELUG00000023973	lsg1	100	64.286	Esox_lucius
ENSLACG00000013399	LSG1	100	65.471	ENSFCAG00000024957	LSG1	100	65.821	Felis_catus
ENSLACG00000013399	LSG1	93	65.605	ENSFALG00000007210	LSG1	94	65.605	Ficedula_albicollis
ENSLACG00000013399	LSG1	99	65.465	ENSFDAG00000017373	LSG1	99	65.813	Fukomys_damarensis
ENSLACG00000013399	LSG1	98	65.639	ENSFHEG00000003680	lsg1	100	65.015	Fundulus_heteroclitus
ENSLACG00000013399	LSG1	83	73.896	ENSGMOG00000015834	lsg1	93	70.251	Gadus_morhua
ENSLACG00000013399	LSG1	99	63.952	ENSGALG00000007058	LSG1	87	64.511	Gallus_gallus
ENSLACG00000013399	LSG1	98	65.123	ENSGAFG00000015831	lsg1	100	64.759	Gambusia_affinis
ENSLACG00000013399	LSG1	98	64.545	ENSGACG00000009323	lsg1	100	64.190	Gasterosteus_aculeatus
ENSLACG00000013399	LSG1	99	64.964	ENSGGOG00000000520	LSG1	99	65.401	Gorilla_gorilla
ENSLACG00000013399	LSG1	100	66.265	ENSHBUG00000005659	lsg1	100	66.265	Haplochromis_burtoni
ENSLACG00000013399	LSG1	99	62.874	ENSHGLG00000017390	LSG1	99	62.222	Heterocephalus_glaber_female
ENSLACG00000013399	LSG1	99	62.874	ENSHGLG00100018587	LSG1	99	62.222	Heterocephalus_glaber_male
ENSLACG00000013399	LSG1	98	65.099	ENSHCOG00000016848	lsg1	100	64.829	Hippocampus_comes
ENSLACG00000013399	LSG1	100	67.218	ENSIPUG00000008631	lsg1	100	66.767	Ictalurus_punctatus
ENSLACG00000013399	LSG1	74	59.681	ENSSTOG00000010234	LSG1	90	62.245	Ictidomys_tridecemlineatus
ENSLACG00000013399	LSG1	99	64.361	ENSJJAG00000015513	Lsg1	99	64.361	Jaculus_jaculus
ENSLACG00000013399	LSG1	98	63.859	ENSKMAG00000009681	lsg1	100	63.528	Kryptolebias_marmoratus
ENSLACG00000013399	LSG1	98	64.427	ENSLBEG00000024261	lsg1	100	64.361	Labrus_bergylta
ENSLACG00000013399	LSG1	98	71.012	ENSLOCG00000004918	lsg1	100	70.721	Lepisosteus_oculatus
ENSLACG00000013399	LSG1	99	66.214	ENSLAFG00000012919	-	99	66.214	Loxodonta_africana
ENSLACG00000013399	LSG1	99	65.719	ENSMFAG00000039903	LSG1	99	64.521	Macaca_fascicularis
ENSLACG00000013399	LSG1	99	65.719	ENSMMUG00000010708	LSG1	99	65.719	Macaca_mulatta
ENSLACG00000013399	LSG1	99	65.719	ENSMNEG00000031538	LSG1	99	64.671	Macaca_nemestrina
ENSLACG00000013399	LSG1	99	65.719	ENSMLEG00000041184	LSG1	99	65.719	Mandrillus_leucophaeus
ENSLACG00000013399	LSG1	100	64.962	ENSMAMG00000000470	lsg1	100	64.662	Mastacembelus_armatus
ENSLACG00000013399	LSG1	100	66.265	ENSMZEG00005017865	lsg1	100	66.265	Maylandia_zebra
ENSLACG00000013399	LSG1	89	65.378	ENSMGAG00000007050	LSG1	99	66.164	Meleagris_gallopavo
ENSLACG00000013399	LSG1	91	63.072	ENSMAUG00000016976	Lsg1	93	63.235	Mesocricetus_auratus
ENSLACG00000013399	LSG1	99	63.839	ENSMICG00000049087	LSG1	99	63.839	Microcebus_murinus
ENSLACG00000013399	LSG1	99	65.127	ENSMOCG00000022136	Lsg1	99	64.636	Microtus_ochrogaster
ENSLACG00000013399	LSG1	82	77.500	ENSMMOG00000008884	lsg1	97	76.680	Mola_mola
ENSLACG00000013399	LSG1	99	56.994	ENSMODG00000019828	LSG1	99	56.548	Monodelphis_domestica
ENSLACG00000013399	LSG1	100	66.021	MGP_CAROLIEiJ_G0020648	Lsg1	100	66.021	Mus_caroli
ENSLACG00000013399	LSG1	100	66.316	ENSMUSG00000022538	Lsg1	100	65.672	Mus_musculus
ENSLACG00000013399	LSG1	99	66.769	MGP_PahariEiJ_G0016352	Lsg1	100	65.327	Mus_pahari
ENSLACG00000013399	LSG1	100	66.767	MGP_SPRETEiJ_G0021544	Lsg1	100	66.319	Mus_spretus
ENSLACG00000013399	LSG1	100	65.211	ENSMPUG00000003734	LSG1	100	65.211	Mustela_putorius_furo
ENSLACG00000013399	LSG1	100	67.218	ENSMLUG00000012548	LSG1	100	67.218	Myotis_lucifugus
ENSLACG00000013399	LSG1	99	64.137	ENSNGAG00000021872	Lsg1	99	64.759	Nannospalax_galili
ENSLACG00000013399	LSG1	99	65.817	ENSNLEG00000008293	LSG1	99	65.817	Nomascus_leucogenys
ENSLACG00000013399	LSG1	69	69.072	ENSMEUG00000009041	-	83	69.072	Notamacropus_eugenii
ENSLACG00000013399	LSG1	100	66.866	ENSONIG00000002635	lsg1	100	66.567	Oreochromis_niloticus
ENSLACG00000013399	LSG1	95	68.396	ENSOANG00000012742	LSG1	99	67.767	Ornithorhynchus_anatinus
ENSLACG00000013399	LSG1	99	64.820	ENSOCUG00000004817	LSG1	99	64.820	Oryctolagus_cuniculus
ENSLACG00000013399	LSG1	98	64.823	ENSORLG00000007695	lsg1	100	64.759	Oryzias_latipes
ENSLACG00000013399	LSG1	98	65.131	ENSORLG00020016286	lsg1	100	65.060	Oryzias_latipes_hni
ENSLACG00000013399	LSG1	98	64.363	ENSORLG00015012025	lsg1	100	63.705	Oryzias_latipes_hsok
ENSLACG00000013399	LSG1	98	64.417	ENSOMEG00000022379	lsg1	100	63.910	Oryzias_melastigma
ENSLACG00000013399	LSG1	99	65.067	ENSOGAG00000003475	LSG1	99	65.067	Otolemur_garnettii
ENSLACG00000013399	LSG1	100	66.165	ENSOARG00000020403	LSG1	100	66.165	Ovis_aries
ENSLACG00000013399	LSG1	99	65.255	ENSPPAG00000029271	LSG1	99	65.255	Pan_paniscus
ENSLACG00000013399	LSG1	100	64.941	ENSPPRG00000010281	LSG1	100	65.288	Panthera_pardus
ENSLACG00000013399	LSG1	100	65.620	ENSPTIG00000010789	LSG1	100	65.970	Panthera_tigris_altaica
ENSLACG00000013399	LSG1	99	65.109	ENSPTRG00000015760	LSG1	99	65.109	Pan_troglodytes
ENSLACG00000013399	LSG1	99	65.569	ENSPANG00000018249	LSG1	99	64.371	Papio_anubis
ENSLACG00000013399	LSG1	99	64.060	ENSPKIG00000002895	lsg1	99	64.565	Paramormyrops_kingsleyae
ENSLACG00000013399	LSG1	96	65.015	ENSPSIG00000009821	LSG1	99	64.571	Pelodiscus_sinensis
ENSLACG00000013399	LSG1	95	66.772	ENSPMGG00000000931	lsg1	100	65.881	Periophthalmus_magnuspinnatus
ENSLACG00000013399	LSG1	99	66.267	ENSPEMG00000012082	-	99	65.517	Peromyscus_maniculatus_bairdii
ENSLACG00000013399	LSG1	99	61.435	ENSPMAG00000007451	lsg1	99	60.921	Petromyzon_marinus
ENSLACG00000013399	LSG1	100	67.016	ENSPCIG00000013890	LSG1	82	67.016	Phascolarctos_cinereus
ENSLACG00000013399	LSG1	98	65.697	ENSPFOG00000021882	lsg1	100	65.172	Poecilia_formosa
ENSLACG00000013399	LSG1	98	65.084	ENSPLAG00000019536	lsg1	100	64.574	Poecilia_latipinna
ENSLACG00000013399	LSG1	98	64.733	ENSPMEG00000017281	lsg1	100	64.232	Poecilia_mexicana
ENSLACG00000013399	LSG1	98	56.449	ENSPREG00000006048	lsg1	100	57.080	Poecilia_reticulata
ENSLACG00000013399	LSG1	92	64.600	ENSPPYG00000014425	LSG1	100	63.948	Pongo_abelii
ENSLACG00000013399	LSG1	90	69.333	ENSPCAG00000005511	LSG1	90	69.333	Procavia_capensis
ENSLACG00000013399	LSG1	99	65.008	ENSPCOG00000012360	LSG1	99	65.008	Propithecus_coquereli
ENSLACG00000013399	LSG1	100	65.574	ENSPNYG00000021994	lsg1	100	65.574	Pundamilia_nyererei
ENSLACG00000013399	LSG1	100	66.616	ENSPNAG00000015533	lsg1	100	66.616	Pygocentrus_nattereri
ENSLACG00000013399	LSG1	100	65.269	ENSRNOG00000001727	Lsg1	100	65.269	Rattus_norvegicus
ENSLACG00000013399	LSG1	99	65.913	ENSRBIG00000029053	LSG1	99	65.913	Rhinopithecus_bieti
ENSLACG00000013399	LSG1	99	65.913	ENSRROG00000037702	LSG1	99	65.913	Rhinopithecus_roxellana
ENSLACG00000013399	LSG1	65	61.078	YGL099W	LSG1	70	61.078	Saccharomyces_cerevisiae
ENSLACG00000013399	LSG1	99	66.667	ENSSBOG00000034938	LSG1	99	66.667	Saimiri_boliviensis_boliviensis
ENSLACG00000013399	LSG1	79	64.165	ENSSHAG00000003487	LSG1	100	63.910	Sarcophilus_harrisii
ENSLACG00000013399	LSG1	98	66.313	ENSSFOG00015008955	lsg1	100	65.676	Scleropages_formosus
ENSLACG00000013399	LSG1	98	67.742	ENSSDUG00000004622	lsg1	100	67.470	Seriola_dumerili
ENSLACG00000013399	LSG1	98	67.127	ENSSLDG00000010869	lsg1	100	66.717	Seriola_lalandi_dorsalis
ENSLACG00000013399	LSG1	81	67.544	ENSSARG00000012981	LSG1	82	67.529	Sorex_araneus
ENSLACG00000013399	LSG1	100	68.601	ENSSPUG00000016347	LSG1	100	67.766	Sphenodon_punctatus
ENSLACG00000013399	LSG1	100	65.134	ENSSSCG00000011827	LSG1	100	65.134	Sus_scrofa
ENSLACG00000013399	LSG1	89	64.793	ENSTGUG00000009068	LSG1	100	64.851	Taeniopygia_guttata
ENSLACG00000013399	LSG1	98	61.712	ENSTRUG00000017380	lsg1	100	61.437	Takifugu_rubripes
ENSLACG00000013399	LSG1	98	66.411	ENSTNIG00000015570	lsg1	100	65.419	Tetraodon_nigroviridis
ENSLACG00000013399	LSG1	100	61.619	ENSTTRG00000000559	LSG1	100	61.619	Tursiops_truncatus
ENSLACG00000013399	LSG1	100	64.458	ENSUAMG00000012454	LSG1	100	64.962	Ursus_americanus
ENSLACG00000013399	LSG1	100	64.458	ENSUMAG00000000855	LSG1	100	64.962	Ursus_maritimus
ENSLACG00000013399	LSG1	95	64.025	ENSVPAG00000012400	LSG1	100	63.233	Vicugna_pacos
ENSLACG00000013399	LSG1	95	64.818	ENSVVUG00000008956	LSG1	97	65.032	Vulpes_vulpes
ENSLACG00000013399	LSG1	100	67.612	ENSXETG00000003451	lsg1	100	67.899	Xenopus_tropicalis
ENSLACG00000013399	LSG1	98	65.586	ENSXCOG00000003239	lsg1	100	65.211	Xiphophorus_couchianus
ENSLACG00000013399	LSG1	98	63.718	ENSXMAG00000005536	lsg1	100	63.836	Xiphophorus_maculatus