EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000013476 (Gene tree)
Gene ID: 102358220
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 91186 bases
Position: chrJH126776.1:863254-954439
Accession: 102355112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015308	ResIII	PF04851.15	2.9e-07	1	1
ENSLACP00000015308	DEAD	PF00270.29	1.8e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015981	DDX42-202	582	XM_005994628	ENSLACP00000015871	193 (aa)	XP_005994690	H3B1V0
ENSLACT00000015414	DDX42-201	3539	XM_005994612	ENSLACP00000015308	923 (aa)	XP_005994675	H3B087

Gene Model

Click here to download ENSLACG00000013476's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG
lcm04260	Cardiac muscle contraction	KEGG
lcm04261	Adrenergic signaling in cardiomyocytes	KEGG
lcm04371	Apelin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000013476	DDX42	59	41.416	ENSLACG00000007965	DDX46	54	41.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013476	DDX42	97	77.436	ENSG00000198231	DDX42	100	83.810	Homo_sapiens
ENSLACG00000013476	DDX42	90	78.029	ENSAPOG00000017675	ddx42	93	76.869	Acanthochromis_polyacanthus
ENSLACG00000013476	DDX42	97	78.533	ENSAMEG00000003200	DDX42	99	77.054	Ailuropoda_melanoleuca
ENSLACG00000013476	DDX42	82	74.870	ENSACIG00000007376	ddx42	99	73.376	Amphilophus_citrinellus
ENSLACG00000013476	DDX42	97	73.305	ENSAOCG00000003520	ddx42	99	72.718	Amphiprion_ocellaris
ENSLACG00000013476	DDX42	97	73.514	ENSAPEG00000000984	ddx42	99	72.921	Amphiprion_percula
ENSLACG00000013476	DDX42	97	74.218	ENSATEG00000022920	ddx42	99	73.098	Anabas_testudineus
ENSLACG00000013476	DDX42	97	76.702	ENSAPLG00000010544	DDX42	99	75.751	Anas_platyrhynchos
ENSLACG00000013476	DDX42	97	77.238	ENSACAG00000003994	DDX42	99	76.407	Anolis_carolinensis
ENSLACG00000013476	DDX42	97	78.518	ENSANAG00000035693	DDX42	99	77.005	Aotus_nancymaae
ENSLACG00000013476	DDX42	90	78.121	ENSACLG00000025113	ddx42	99	73.205	Astatotilapia_calliptera
ENSLACG00000013476	DDX42	77	82.434	ENSAMXG00000011435	ddx42	99	69.008	Astyanax_mexicanus
ENSLACG00000013476	DDX42	97	77.533	ENSBTAG00000021058	DDX42	99	76.575	Bos_taurus
ENSLACG00000013476	DDX42	73	48.607	WBGene00008119	C46F11.4	85	49.369	Caenorhabditis_elegans
ENSLACG00000013476	DDX42	97	78.158	ENSCJAG00000019649	DDX42	97	86.613	Callithrix_jacchus
ENSLACG00000013476	DDX42	97	77.979	ENSCAFG00000012818	DDX42	99	76.496	Canis_familiaris
ENSLACG00000013476	DDX42	97	78.085	ENSCAFG00020026631	DDX42	99	76.603	Canis_lupus_dingo
ENSLACG00000013476	DDX42	97	78.204	ENSCHIG00000014431	DDX42	99	76.670	Capra_hircus
ENSLACG00000013476	DDX42	97	77.021	ENSTSYG00000001380	DDX42	99	75.962	Carlito_syrichta
ENSLACG00000013476	DDX42	72	63.663	ENSCAPG00000013621	DDX42	87	65.348	Cavia_aperea
ENSLACG00000013476	DDX42	97	78.471	ENSCPOG00000005633	DDX42	99	76.534	Cavia_porcellus
ENSLACG00000013476	DDX42	97	74.381	ENSCCAG00000020612	DDX42	87	87.621	Cebus_capucinus
ENSLACG00000013476	DDX42	97	78.341	ENSCATG00000030490	DDX42	99	76.956	Cercocebus_atys
ENSLACG00000013476	DDX42	97	78.433	ENSCLAG00000003497	DDX42	99	76.502	Chinchilla_lanigera
ENSLACG00000013476	DDX42	97	73.973	ENSCSAG00000003914	DDX42	99	73.277	Chlorocebus_sabaeus
ENSLACG00000013476	DDX42	76	85.714	ENSCHOG00000006241	DDX42	73	85.714	Choloepus_hoffmanni
ENSLACG00000013476	DDX42	97	76.632	ENSCPBG00000026682	DDX42	99	75.422	Chrysemys_picta_bellii
ENSLACG00000013476	DDX42	97	78.341	ENSCANG00000034663	DDX42	89	87.520	Colobus_angolensis_palliatus
ENSLACG00000013476	DDX42	97	77.409	ENSCGRG00001009775	Ddx42	99	76.552	Cricetulus_griseus_chok1gshd
ENSLACG00000013476	DDX42	97	77.409	ENSCGRG00000011718	Ddx42	99	76.552	Cricetulus_griseus_crigri
ENSLACG00000013476	DDX42	97	73.210	ENSCSEG00000021574	ddx42	99	72.086	Cynoglossus_semilaevis
ENSLACG00000013476	DDX42	97	73.115	ENSCVAG00000011404	ddx42	99	72.354	Cyprinodon_variegatus
ENSLACG00000013476	DDX42	97	71.905	ENSDARG00000037928	ddx42	99	71.033	Danio_rerio
ENSLACG00000013476	DDX42	97	74.893	ENSDNOG00000007961	DDX42	77	87.836	Dasypus_novemcinctus
ENSLACG00000013476	DDX42	97	71.123	ENSDORG00000004199	Ddx42	99	68.690	Dipodomys_ordii
ENSLACG00000013476	DDX42	66	61.613	FBgn0036104	CG6418	84	59.549	Drosophila_melanogaster
ENSLACG00000013476	DDX42	82	70.817	ENSEBUG00000001155	ddx42	94	69.290	Eptatretus_burgeri
ENSLACG00000013476	DDX42	97	78.698	ENSEASG00005013089	DDX42	93	84.604	Equus_asinus_asinus
ENSLACG00000013476	DDX42	97	77.683	ENSECAG00000022684	DDX42	99	76.307	Equus_caballus
ENSLACG00000013476	DDX42	58	89.189	ENSEEUG00000009144	DDX42	73	89.189	Erinaceus_europaeus
ENSLACG00000013476	DDX42	97	72.180	ENSELUG00000020593	ddx42	99	71.290	Esox_lucius
ENSLACG00000013476	DDX42	97	77.766	ENSFCAG00000003499	DDX42	99	76.282	Felis_catus
ENSLACG00000013476	DDX42	92	79.439	ENSFALG00000004675	DDX42	66	86.765	Ficedula_albicollis
ENSLACG00000013476	DDX42	97	78.051	ENSFDAG00000020516	DDX42	99	75.910	Fukomys_damarensis
ENSLACG00000013476	DDX42	97	70.753	ENSFHEG00000023290	ddx42	99	71.152	Fundulus_heteroclitus
ENSLACG00000013476	DDX42	76	77.746	ENSGMOG00000004595	ddx42	88	77.324	Gadus_morhua
ENSLACG00000013476	DDX42	97	75.710	ENSGALG00000000581	DDX42	99	74.576	Gallus_gallus
ENSLACG00000013476	DDX42	93	73.720	ENSGAFG00000011846	ddx42	91	75.793	Gambusia_affinis
ENSLACG00000013476	DDX42	97	69.846	ENSGACG00000009782	ddx42	99	69.205	Gasterosteus_aculeatus
ENSLACG00000013476	DDX42	97	76.899	ENSGAGG00000024411	DDX42	99	74.367	Gopherus_agassizii
ENSLACG00000013476	DDX42	97	78.556	ENSGGOG00000006779	DDX42	99	76.874	Gorilla_gorilla
ENSLACG00000013476	DDX42	90	78.240	ENSHBUG00000008705	ddx42	99	73.312	Haplochromis_burtoni
ENSLACG00000013476	DDX42	97	74.489	ENSHGLG00000010024	DDX42	99	72.336	Heterocephalus_glaber_female
ENSLACG00000013476	DDX42	89	60.964	ENSHGLG00100007138	-	90	59.878	Heterocephalus_glaber_male
ENSLACG00000013476	DDX42	97	77.021	ENSHGLG00100004479	-	99	75.748	Heterocephalus_glaber_male
ENSLACG00000013476	DDX42	97	71.920	ENSHCOG00000003357	ddx42	99	72.204	Hippocampus_comes
ENSLACG00000013476	DDX42	97	73.047	ENSIPUG00000013327	ddx42	99	71.183	Ictalurus_punctatus
ENSLACG00000013476	DDX42	97	78.242	ENSSTOG00000008922	DDX42	99	76.099	Ictidomys_tridecemlineatus
ENSLACG00000013476	DDX42	97	78.680	ENSJJAG00000011727	Ddx42	99	76.496	Jaculus_jaculus
ENSLACG00000013476	DDX42	97	72.835	ENSKMAG00000009914	ddx42	99	72.366	Kryptolebias_marmoratus
ENSLACG00000013476	DDX42	81	77.291	ENSLBEG00000004687	ddx42	85	76.247	Labrus_bergylta
ENSLACG00000013476	DDX42	97	76.299	ENSLOCG00000011764	ddx42	99	75.189	Lepisosteus_oculatus
ENSLACG00000013476	DDX42	97	78.038	ENSLAFG00000003249	DDX42	99	76.445	Loxodonta_africana
ENSLACG00000013476	DDX42	97	78.341	ENSMFAG00000031356	DDX42	99	76.849	Macaca_fascicularis
ENSLACG00000013476	DDX42	97	78.595	ENSMMUG00000016762	DDX42	99	76.948	Macaca_mulatta
ENSLACG00000013476	DDX42	97	78.341	ENSMNEG00000038250	DDX42	99	76.849	Macaca_nemestrina
ENSLACG00000013476	DDX42	97	77.225	ENSMLEG00000043080	DDX42	99	76.439	Mandrillus_leucophaeus
ENSLACG00000013476	DDX42	90	78.121	ENSMZEG00005023103	ddx42	99	73.205	Maylandia_zebra
ENSLACG00000013476	DDX42	97	75.815	ENSMGAG00000001822	DDX42	99	75.000	Meleagris_gallopavo
ENSLACG00000013476	DDX42	76	80.224	ENSMAUG00000020774	-	87	84.146	Mesocricetus_auratus
ENSLACG00000013476	DDX42	97	78.172	ENSMICG00000009952	DDX42	99	75.970	Microcebus_murinus
ENSLACG00000013476	DDX42	97	77.802	ENSMOCG00000015504	Ddx42	99	76.732	Microtus_ochrogaster
ENSLACG00000013476	DDX42	90	74.851	ENSMMOG00000016963	ddx42	86	72.727	Mola_mola
ENSLACG00000013476	DDX42	50	88.675	ENSMODG00000009917	-	98	88.034	Monodelphis_domestica
ENSLACG00000013476	DDX42	97	74.426	ENSMALG00000007800	ddx42	99	72.522	Monopterus_albus
ENSLACG00000013476	DDX42	97	77.503	MGP_CAROLIEiJ_G0017314	Ddx42	99	76.319	Mus_caroli
ENSLACG00000013476	DDX42	97	77.610	ENSMUSG00000020705	Ddx42	99	76.319	Mus_musculus
ENSLACG00000013476	DDX42	73	88.279	MGP_PahariEiJ_G0018444	-	96	87.758	Mus_pahari
ENSLACG00000013476	DDX42	97	77.444	MGP_SPRETEiJ_G0018158	Ddx42	99	76.262	Mus_spretus
ENSLACG00000013476	DDX42	97	77.436	ENSMPUG00000014921	DDX42	99	76.064	Mustela_putorius_furo
ENSLACG00000013476	DDX42	97	76.285	ENSMLUG00000011645	DDX42	99	74.499	Myotis_lucifugus
ENSLACG00000013476	DDX42	97	79.027	ENSNGAG00000021897	Ddx42	99	77.189	Nannospalax_galili
ENSLACG00000013476	DDX42	97	71.858	ENSNBRG00000004466	ddx42	99	72.073	Neolamprologus_brichardi
ENSLACG00000013476	DDX42	97	78.964	ENSNLEG00000004248	DDX42	89	87.621	Nomascus_leucogenys
ENSLACG00000013476	DDX42	72	74.010	ENSMEUG00000013227	-	84	74.010	Notamacropus_eugenii
ENSLACG00000013476	DDX42	97	77.378	ENSOPRG00000014960	DDX42	99	75.716	Ochotona_princeps
ENSLACG00000013476	DDX42	97	74.893	ENSODEG00000007810	DDX42	99	72.961	Octodon_degus
ENSLACG00000013476	DDX42	90	78.240	ENSONIG00000000734	ddx42	99	73.312	Oreochromis_niloticus
ENSLACG00000013476	DDX42	58	83.488	ENSOANG00000000265	DDX42	100	83.488	Ornithorhynchus_anatinus
ENSLACG00000013476	DDX42	95	79.106	ENSOCUG00000004304	DDX42	87	78.217	Oryctolagus_cuniculus
ENSLACG00000013476	DDX42	97	71.674	ENSORLG00000002395	ddx42	98	72.707	Oryzias_latipes
ENSLACG00000013476	DDX42	97	72.073	ENSORLG00020011621	ddx42	99	72.519	Oryzias_latipes_hni
ENSLACG00000013476	DDX42	97	72.395	ENSORLG00015004487	ddx42	99	72.737	Oryzias_latipes_hsok
ENSLACG00000013476	DDX42	97	72.718	ENSOMEG00000020093	ddx42	99	73.638	Oryzias_melastigma
ENSLACG00000013476	DDX42	97	77.128	ENSOGAG00000006872	DDX42	99	75.855	Otolemur_garnettii
ENSLACG00000013476	DDX42	97	76.205	ENSOARG00000013540	DDX42	99	75.869	Ovis_aries
ENSLACG00000013476	DDX42	97	78.556	ENSPPAG00000007496	DDX42	99	76.874	Pan_paniscus
ENSLACG00000013476	DDX42	97	77.766	ENSPPRG00000002740	DDX42	99	76.282	Panthera_pardus
ENSLACG00000013476	DDX42	97	78.085	ENSPTIG00000009932	DDX42	99	76.496	Panthera_tigris_altaica
ENSLACG00000013476	DDX42	97	78.556	ENSPTRG00000009523	DDX42	99	76.874	Pan_troglodytes
ENSLACG00000013476	DDX42	97	78.448	ENSPANG00000020990	DDX42	99	76.956	Papio_anubis
ENSLACG00000013476	DDX42	97	72.155	ENSPKIG00000002901	ddx42	99	71.568	Paramormyrops_kingsleyae
ENSLACG00000013476	DDX42	86	83.002	ENSPSIG00000010289	DDX42	95	84.419	Pelodiscus_sinensis
ENSLACG00000013476	DDX42	97	70.721	ENSPMGG00000009323	ddx42	99	69.925	Periophthalmus_magnuspinnatus
ENSLACG00000013476	DDX42	97	77.219	ENSPEMG00000006755	Ddx42	99	76.257	Peromyscus_maniculatus_bairdii
ENSLACG00000013476	DDX42	80	72.047	ENSPMAG00000005580	ddx42	99	72.332	Petromyzon_marinus
ENSLACG00000013476	DDX42	97	77.696	ENSPCIG00000009093	DDX42	99	75.953	Phascolarctos_cinereus
ENSLACG00000013476	DDX42	97	75.422	ENSPPYG00000008531	DDX42	99	74.231	Pongo_abelii
ENSLACG00000013476	DDX42	89	71.461	ENSPCAG00000002474	DDX42	99	70.636	Procavia_capensis
ENSLACG00000013476	DDX42	97	68.483	ENSPCOG00000001559	DDX42	92	76.636	Propithecus_coquereli
ENSLACG00000013476	DDX42	97	75.506	ENSPVAG00000000160	DDX42	99	73.426	Pteropus_vampyrus
ENSLACG00000013476	DDX42	75	76.471	ENSPNYG00000013954	ddx42	97	70.849	Pundamilia_nyererei
ENSLACG00000013476	DDX42	95	70.588	ENSPNAG00000017352	ddx42	99	68.712	Pygocentrus_nattereri
ENSLACG00000013476	DDX42	97	77.742	ENSRNOG00000009474	Ddx42	99	76.559	Rattus_norvegicus
ENSLACG00000013476	DDX42	97	78.341	ENSRBIG00000004781	DDX42	89	87.520	Rhinopithecus_bieti
ENSLACG00000013476	DDX42	97	78.341	ENSRROG00000029794	DDX42	99	76.849	Rhinopithecus_roxellana
ENSLACG00000013476	DDX42	97	78.579	ENSSBOG00000029624	DDX42	91	85.054	Saimiri_boliviensis_boliviensis
ENSLACG00000013476	DDX42	97	77.696	ENSSHAG00000012896	-	99	75.847	Sarcophilus_harrisii
ENSLACG00000013476	DDX42	68	52.624	ENSSHAG00000007919	-	85	55.882	Sarcophilus_harrisii
ENSLACG00000013476	DDX42	78	82.806	ENSSFOG00015014064	ddx42	80	82.329	Scleropages_formosus
ENSLACG00000013476	DDX42	97	71.092	ENSSMAG00000009077	ddx42	99	72.464	Scophthalmus_maximus
ENSLACG00000013476	DDX42	97	74.540	ENSSDUG00000022221	ddx42	99	73.077	Seriola_dumerili
ENSLACG00000013476	DDX42	97	74.508	ENSSLDG00000018483	ddx42	99	72.492	Seriola_lalandi_dorsalis
ENSLACG00000013476	DDX42	97	76.939	ENSSARG00000009847	DDX42	99	75.748	Sorex_araneus
ENSLACG00000013476	DDX42	97	79.274	ENSSPUG00000018806	DDX42	99	77.837	Sphenodon_punctatus
ENSLACG00000013476	DDX42	97	73.781	ENSSPAG00000013055	ddx42	99	73.077	Stegastes_partitus
ENSLACG00000013476	DDX42	83	75.123	ENSSSCG00000017289	DDX42	97	73.886	Sus_scrofa
ENSLACG00000013476	DDX42	97	76.408	ENSTGUG00000001931	DDX42	99	75.213	Taeniopygia_guttata
ENSLACG00000013476	DDX42	97	73.208	ENSTRUG00000010711	ddx42	99	81.375	Takifugu_rubripes
ENSLACG00000013476	DDX42	80	82.075	ENSTBEG00000010159	DDX42	98	81.150	Tupaia_belangeri
ENSLACG00000013476	DDX42	97	77.481	ENSTTRG00000006962	DDX42	99	75.667	Tursiops_truncatus
ENSLACG00000013476	DDX42	97	78.321	ENSUAMG00000007321	DDX42	99	76.972	Ursus_americanus
ENSLACG00000013476	DDX42	97	78.228	ENSUMAG00000017438	DDX42	99	76.742	Ursus_maritimus
ENSLACG00000013476	DDX42	97	68.617	ENSVPAG00000009633	DDX42	99	67.022	Vicugna_pacos
ENSLACG00000013476	DDX42	97	78.191	ENSVVUG00000006095	DDX42	99	76.709	Vulpes_vulpes
ENSLACG00000013476	DDX42	97	75.079	ENSXETG00000003245	ddx42	99	72.680	Xenopus_tropicalis
ENSLACG00000013476	DDX42	82	72.123	ENSXCOG00000017560	ddx42	97	72.251	Xiphophorus_couchianus
ENSLACG00000013476	DDX42	97	72.649	ENSXMAG00000008138	ddx42	99	72.649	Xiphophorus_maculatus