EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000013546 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2470 bases
Position: chrJH127127.1:874660-877129
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015386	RVT_1	PF00078.27	1.2e-25	1	1
ENSLACP00000015387	RVT_1	PF00078.27	5.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015493	-	711	-	ENSLACP00000015387	237 (aa)	-	H3B0G6
ENSLACT00000015492	-	1884	-	ENSLACP00000015386	628 (aa)	-	H3B0G5

Gene Model

Click here to download ENSLACG00000013546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000013546	-	97	78.025	ENSLACG00000010539	-	81	78.025
ENSLACG00000013546	-	92	78.512	ENSLACG00000006083	-	99	82.178
ENSLACG00000013546	-	98	76.378	ENSLACG00000011106	-	97	76.378
ENSLACG00000013546	-	95	64.228	ENSLACG00000005758	-	91	52.823
ENSLACG00000013546	-	99	82.171	ENSLACG00000006107	-	52	80.923
ENSLACG00000013546	-	98	80.242	ENSLACG00000008392	-	96	80.242
ENSLACG00000013546	-	92	74.368	ENSLACG00000005686	-	100	74.368
ENSLACG00000013546	-	97	78.261	ENSLACG00000016962	-	99	78.689
ENSLACG00000013546	-	98	34.646	ENSLACG00000001271	-	79	35.922
ENSLACG00000013546	-	99	76.562	ENSLACG00000012377	-	66	76.562
ENSLACG00000013546	-	99	77.011	ENSLACG00000010696	-	94	75.172
ENSLACG00000013546	-	77	82.505	ENSLACG00000011412	-	100	82.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013546	-	82	33.023	ENSPFOG00000024591	-	99	31.003	Poecilia_formosa