EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000013666 (Gene tree)
Gene ID: 102358154
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 34748 bases
Position: chrJH127129.1:892143-926890
Accession: 102358154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015522	RTC	PF01137.21	1.7e-84	1	1
ENSLACP00000015522	RTC_insert	PF05189.13	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015630	RTCA-201	1704	XM_006000023	ENSLACP00000015522	365 (aa)	XP_006000085	H3B0V1

Gene Model

Click here to download ENSLACG00000013666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013666	RTCA	100	78.142	ENSG00000137996	RTCA	100	78.142	Homo_sapiens
ENSLACG00000013666	RTCA	100	67.397	ENSAPOG00000001345	rtca	99	67.397	Acanthochromis_polyacanthus
ENSLACG00000013666	RTCA	73	79.182	ENSAMEG00000008855	RTCA	100	79.182	Ailuropoda_melanoleuca
ENSLACG00000013666	RTCA	100	67.945	ENSACIG00000019643	rtca	100	67.945	Amphilophus_citrinellus
ENSLACG00000013666	RTCA	100	67.397	ENSAOCG00000014979	rtca	99	67.397	Amphiprion_ocellaris
ENSLACG00000013666	RTCA	100	67.397	ENSAPEG00000006945	rtca	99	67.397	Amphiprion_percula
ENSLACG00000013666	RTCA	96	68.000	ENSATEG00000006315	rtca	96	68.000	Anabas_testudineus
ENSLACG00000013666	RTCA	96	73.371	ENSAPLG00000015430	RTCA	100	73.371	Anas_platyrhynchos
ENSLACG00000013666	RTCA	100	77.869	ENSANAG00000025446	RTCA	100	77.869	Aotus_nancymaae
ENSLACG00000013666	RTCA	100	67.671	ENSACLG00000020770	rtca	99	67.671	Astatotilapia_calliptera
ENSLACG00000013666	RTCA	100	67.945	ENSAMXG00000043271	rtca	100	67.945	Astyanax_mexicanus
ENSLACG00000013666	RTCA	100	77.596	ENSBTAG00000006321	RTCA	100	77.596	Bos_taurus
ENSLACG00000013666	RTCA	100	77.869	ENSCJAG00000003398	RTCA	100	77.869	Callithrix_jacchus
ENSLACG00000013666	RTCA	100	78.142	ENSCAFG00000020010	RTCA	68	78.142	Canis_familiaris
ENSLACG00000013666	RTCA	100	78.142	ENSCAFG00020011528	RTCA	57	78.142	Canis_lupus_dingo
ENSLACG00000013666	RTCA	100	77.596	ENSCHIG00000018937	RTCA	100	77.596	Capra_hircus
ENSLACG00000013666	RTCA	100	78.142	ENSTSYG00000011305	RTCA	100	78.142	Carlito_syrichta
ENSLACG00000013666	RTCA	100	77.322	ENSCCAG00000021844	RTCA	99	78.679	Cebus_capucinus
ENSLACG00000013666	RTCA	100	75.462	ENSCATG00000019364	RTCA	100	78.964	Cercocebus_atys
ENSLACG00000013666	RTCA	87	78.481	ENSCLAG00000006125	RTCA	100	78.481	Chinchilla_lanigera
ENSLACG00000013666	RTCA	100	78.142	ENSCSAG00000001509	RTCA	100	78.142	Chlorocebus_sabaeus
ENSLACG00000013666	RTCA	100	77.049	ENSCHOG00000005211	RTCA	100	77.049	Choloepus_hoffmanni
ENSLACG00000013666	RTCA	100	74.247	ENSCPBG00000026658	RTCA	100	74.247	Chrysemys_picta_bellii
ENSLACG00000013666	RTCA	98	56.267	ENSCING00000007875	-	98	56.267	Ciona_intestinalis
ENSLACG00000013666	RTCA	98	55.710	ENSCSAVG00000007269	-	98	55.710	Ciona_savignyi
ENSLACG00000013666	RTCA	100	78.415	ENSCANG00000040106	RTCA	100	78.415	Colobus_angolensis_palliatus
ENSLACG00000013666	RTCA	73	78.439	ENSCGRG00001013163	Rtca	85	78.439	Cricetulus_griseus_chok1gshd
ENSLACG00000013666	RTCA	98	66.852	ENSCSEG00000000530	rtca	96	66.852	Cynoglossus_semilaevis
ENSLACG00000013666	RTCA	100	56.403	ENSCVAG00000021809	rtca	100	56.403	Cyprinodon_variegatus
ENSLACG00000013666	RTCA	100	69.863	ENSDARG00000002215	rtca	100	69.863	Danio_rerio
ENSLACG00000013666	RTCA	100	77.049	ENSDNOG00000000456	RTCA	100	77.049	Dasypus_novemcinctus
ENSLACG00000013666	RTCA	100	77.596	ENSDORG00000005448	Rtca	100	77.596	Dipodomys_ordii
ENSLACG00000013666	RTCA	99	37.673	FBgn0025630	Rtca	99	37.673	Drosophila_melanogaster
ENSLACG00000013666	RTCA	95	55.714	ENSEBUG00000008556	rtca	96	55.714	Eptatretus_burgeri
ENSLACG00000013666	RTCA	100	78.142	ENSEASG00005015926	RTCA	100	78.142	Equus_asinus_asinus
ENSLACG00000013666	RTCA	100	78.142	ENSECAG00000019831	RTCA	100	78.142	Equus_caballus
ENSLACG00000013666	RTCA	91	69.942	ENSEEUG00000001165	RTCA	100	69.942	Erinaceus_europaeus
ENSLACG00000013666	RTCA	98	69.359	ENSELUG00000003741	rtca	99	69.359	Esox_lucius
ENSLACG00000013666	RTCA	100	78.142	ENSFCAG00000024460	RTCA	100	78.142	Felis_catus
ENSLACG00000013666	RTCA	91	75.075	ENSFALG00000002443	RTCA	90	75.075	Ficedula_albicollis
ENSLACG00000013666	RTCA	100	77.322	ENSFDAG00000012070	-	100	77.322	Fukomys_damarensis
ENSLACG00000013666	RTCA	97	61.517	ENSFDAG00000016084	-	98	61.517	Fukomys_damarensis
ENSLACG00000013666	RTCA	56	67.488	ENSFHEG00000002868	rtca	97	63.274	Fundulus_heteroclitus
ENSLACG00000013666	RTCA	100	66.027	ENSGMOG00000013264	rtca	100	66.027	Gadus_morhua
ENSLACG00000013666	RTCA	100	74.521	ENSGALG00000005277	RTCA	100	74.521	Gallus_gallus
ENSLACG00000013666	RTCA	100	67.397	ENSGAFG00000011853	rtca	99	67.397	Gambusia_affinis
ENSLACG00000013666	RTCA	100	67.397	ENSGACG00000013497	rtca	100	67.397	Gasterosteus_aculeatus
ENSLACG00000013666	RTCA	80	73.720	ENSGAGG00000023306	RTCA	100	73.720	Gopherus_agassizii
ENSLACG00000013666	RTCA	100	77.049	ENSGGOG00000044018	-	100	77.049	Gorilla_gorilla
ENSLACG00000013666	RTCA	100	77.869	ENSGGOG00000009546	-	100	78.641	Gorilla_gorilla
ENSLACG00000013666	RTCA	100	67.397	ENSHBUG00000002114	rtca	99	67.397	Haplochromis_burtoni
ENSLACG00000013666	RTCA	100	76.503	ENSHGLG00000002617	RTCA	100	76.503	Heterocephalus_glaber_female
ENSLACG00000013666	RTCA	100	76.503	ENSHGLG00100006056	RTCA	100	76.503	Heterocephalus_glaber_male
ENSLACG00000013666	RTCA	100	63.836	ENSHCOG00000020628	rtca	89	63.836	Hippocampus_comes
ENSLACG00000013666	RTCA	100	67.671	ENSIPUG00000024803	rtca	100	67.671	Ictalurus_punctatus
ENSLACG00000013666	RTCA	100	68.033	ENSSTOG00000033099	-	100	68.033	Ictidomys_tridecemlineatus
ENSLACG00000013666	RTCA	100	72.404	ENSSTOG00000013528	-	100	72.404	Ictidomys_tridecemlineatus
ENSLACG00000013666	RTCA	100	55.738	ENSJJAG00000016178	Rtca	100	55.738	Jaculus_jaculus
ENSLACG00000013666	RTCA	100	67.397	ENSKMAG00000006651	rtca	99	67.397	Kryptolebias_marmoratus
ENSLACG00000013666	RTCA	99	67.218	ENSLBEG00000028971	rtca	99	67.218	Labrus_bergylta
ENSLACG00000013666	RTCA	88	66.875	ENSLBEG00000002448	-	99	66.875	Labrus_bergylta
ENSLACG00000013666	RTCA	100	71.507	ENSLOCG00000000093	rtca	99	71.507	Lepisosteus_oculatus
ENSLACG00000013666	RTCA	100	77.322	ENSLAFG00000001473	RTCA	100	77.322	Loxodonta_africana
ENSLACG00000013666	RTCA	100	78.142	ENSMFAG00000034132	RTCA	100	78.142	Macaca_fascicularis
ENSLACG00000013666	RTCA	100	77.596	ENSMMUG00000019105	RTCA	100	77.596	Macaca_mulatta
ENSLACG00000013666	RTCA	84	78.964	ENSMNEG00000037163	RTCA	100	78.964	Macaca_nemestrina
ENSLACG00000013666	RTCA	100	63.934	ENSMLEG00000042151	RTCA	100	63.934	Mandrillus_leucophaeus
ENSLACG00000013666	RTCA	100	68.767	ENSMAMG00000016536	rtca	100	68.767	Mastacembelus_armatus
ENSLACG00000013666	RTCA	100	67.671	ENSMZEG00005017945	rtca	99	67.671	Maylandia_zebra
ENSLACG00000013666	RTCA	87	75.472	ENSMGAG00000006892	RTCA	99	75.472	Meleagris_gallopavo
ENSLACG00000013666	RTCA	100	77.322	ENSMAUG00000008488	Rtca	100	77.322	Mesocricetus_auratus
ENSLACG00000013666	RTCA	84	77.994	ENSMICG00000008643	RTCA	100	77.994	Microcebus_murinus
ENSLACG00000013666	RTCA	100	78.142	ENSMOCG00000016660	Rtca	100	78.142	Microtus_ochrogaster
ENSLACG00000013666	RTCA	84	66.558	ENSMMOG00000007750	rtca	100	66.558	Mola_mola
ENSLACG00000013666	RTCA	100	78.415	ENSMODG00000003557	RTCA	100	78.415	Monodelphis_domestica
ENSLACG00000013666	RTCA	100	68.767	ENSMALG00000020844	rtca	100	68.767	Monopterus_albus
ENSLACG00000013666	RTCA	100	77.322	MGP_CAROLIEiJ_G0025565	Rtca	100	77.465	Mus_caroli
ENSLACG00000013666	RTCA	100	77.049	ENSMUSG00000000339	Rtca	100	77.465	Mus_musculus
ENSLACG00000013666	RTCA	100	77.049	MGP_PahariEiJ_G0027011	Rtca	100	77.049	Mus_pahari
ENSLACG00000013666	RTCA	100	77.049	MGP_SPRETEiJ_G0026515	Rtca	100	77.049	Mus_spretus
ENSLACG00000013666	RTCA	100	78.415	ENSMPUG00000012119	RTCA	100	78.415	Mustela_putorius_furo
ENSLACG00000013666	RTCA	100	74.659	ENSMLUG00000009922	RTCA	100	74.659	Myotis_lucifugus
ENSLACG00000013666	RTCA	100	77.869	ENSNGAG00000011540	Rtca	99	77.869	Nannospalax_galili
ENSLACG00000013666	RTCA	100	67.671	ENSNBRG00000003062	rtca	99	67.671	Neolamprologus_brichardi
ENSLACG00000013666	RTCA	100	78.415	ENSNLEG00000031426	RTCA	100	78.415	Nomascus_leucogenys
ENSLACG00000013666	RTCA	73	75.093	ENSOPRG00000012092	RTCA	71	75.093	Ochotona_princeps
ENSLACG00000013666	RTCA	95	77.874	ENSODEG00000006990	RTCA	96	78.063	Octodon_degus
ENSLACG00000013666	RTCA	100	67.397	ENSONIG00000007753	rtca	99	67.397	Oreochromis_niloticus
ENSLACG00000013666	RTCA	87	77.603	ENSOANG00000012055	RTCA	98	77.603	Ornithorhynchus_anatinus
ENSLACG00000013666	RTCA	100	78.962	ENSOCUG00000014247	RTCA	100	78.962	Oryctolagus_cuniculus
ENSLACG00000013666	RTCA	100	66.575	ENSORLG00000013605	rtca	100	66.575	Oryzias_latipes
ENSLACG00000013666	RTCA	100	66.849	ENSORLG00020001904	rtca	100	66.849	Oryzias_latipes_hni
ENSLACG00000013666	RTCA	100	66.849	ENSORLG00015021064	rtca	100	66.849	Oryzias_latipes_hsok
ENSLACG00000013666	RTCA	100	67.397	ENSOMEG00000000756	rtca	100	67.397	Oryzias_melastigma
ENSLACG00000013666	RTCA	100	70.492	ENSOGAG00000005627	RTCA	100	70.492	Otolemur_garnettii
ENSLACG00000013666	RTCA	87	77.987	ENSOARG00000018122	RTCA	100	77.987	Ovis_aries
ENSLACG00000013666	RTCA	100	75.462	ENSPPAG00000035119	RTCA	100	79.288	Pan_paniscus
ENSLACG00000013666	RTCA	100	78.142	ENSPPRG00000000350	RTCA	100	78.142	Panthera_pardus
ENSLACG00000013666	RTCA	100	77.869	ENSPTIG00000012816	RTCA	100	77.869	Panthera_tigris_altaica
ENSLACG00000013666	RTCA	100	74.934	ENSPTRG00000001004	RTCA	100	78.641	Pan_troglodytes
ENSLACG00000013666	RTCA	100	78.415	ENSPANG00000000346	RTCA	100	78.415	Papio_anubis
ENSLACG00000013666	RTCA	100	70.137	ENSPKIG00000001653	rtca	100	70.137	Paramormyrops_kingsleyae
ENSLACG00000013666	RTCA	100	74.247	ENSPSIG00000011408	RTCA	100	74.247	Pelodiscus_sinensis
ENSLACG00000013666	RTCA	100	78.689	ENSPEMG00000018582	Rtca	100	78.689	Peromyscus_maniculatus_bairdii
ENSLACG00000013666	RTCA	99	55.769	ENSPMAG00000009110	rtca	99	55.769	Petromyzon_marinus
ENSLACG00000013666	RTCA	100	78.689	ENSPCIG00000007684	RTCA	100	78.689	Phascolarctos_cinereus
ENSLACG00000013666	RTCA	100	67.486	ENSPFOG00000004824	rtca	100	67.486	Poecilia_formosa
ENSLACG00000013666	RTCA	100	67.671	ENSPLAG00000011753	rtca	99	67.671	Poecilia_latipinna
ENSLACG00000013666	RTCA	100	67.671	ENSPMEG00000020469	rtca	99	67.671	Poecilia_mexicana
ENSLACG00000013666	RTCA	100	68.493	ENSPREG00000001365	rtca	99	68.493	Poecilia_reticulata
ENSLACG00000013666	RTCA	100	77.869	ENSPPYG00000001115	RTCA	100	77.869	Pongo_abelii
ENSLACG00000013666	RTCA	100	74.317	ENSPCAG00000005076	RTCA	100	74.317	Procavia_capensis
ENSLACG00000013666	RTCA	100	77.869	ENSPCOG00000005603	RTCA	100	77.869	Propithecus_coquereli
ENSLACG00000013666	RTCA	100	73.879	ENSPVAG00000009478	RTCA	100	73.879	Pteropus_vampyrus
ENSLACG00000013666	RTCA	100	67.671	ENSPNYG00000004722	rtca	99	67.671	Pundamilia_nyererei
ENSLACG00000013666	RTCA	100	69.041	ENSPNAG00000022270	rtca	100	69.041	Pygocentrus_nattereri
ENSLACG00000013666	RTCA	100	76.776	ENSRNOG00000014575	Rtca	100	76.776	Rattus_norvegicus
ENSLACG00000013666	RTCA	100	75.462	ENSRBIG00000041180	RTCA	100	78.964	Rhinopithecus_bieti
ENSLACG00000013666	RTCA	100	78.142	ENSRROG00000024929	RTCA	100	78.142	Rhinopithecus_roxellana
ENSLACG00000013666	RTCA	100	77.322	ENSSBOG00000028626	RTCA	100	77.322	Saimiri_boliviensis_boliviensis
ENSLACG00000013666	RTCA	100	78.689	ENSSHAG00000001758	RTCA	100	78.689	Sarcophilus_harrisii
ENSLACG00000013666	RTCA	98	65.460	ENSSMAG00000014680	rtca	97	65.460	Scophthalmus_maximus
ENSLACG00000013666	RTCA	98	68.245	ENSSDUG00000015585	rtca	97	68.245	Seriola_dumerili
ENSLACG00000013666	RTCA	96	68.571	ENSSLDG00000018985	rtca	95	68.571	Seriola_lalandi_dorsalis
ENSLACG00000013666	RTCA	87	74.763	ENSSARG00000013993	RTCA	100	74.763	Sorex_araneus
ENSLACG00000013666	RTCA	100	67.671	ENSSPAG00000011938	rtca	99	67.671	Stegastes_partitus
ENSLACG00000013666	RTCA	100	78.142	ENSSSCG00000006865	RTCA	100	78.142	Sus_scrofa
ENSLACG00000013666	RTCA	100	74.521	ENSTGUG00000005154	RTCA	100	74.521	Taeniopygia_guttata
ENSLACG00000013666	RTCA	100	68.767	ENSTRUG00000008799	rtca	100	68.767	Takifugu_rubripes
ENSLACG00000013666	RTCA	100	67.671	ENSTNIG00000004725	rtca	100	67.671	Tetraodon_nigroviridis
ENSLACG00000013666	RTCA	58	65.421	ENSTBEG00000000943	RTCA	81	54.622	Tupaia_belangeri
ENSLACG00000013666	RTCA	100	73.351	ENSTTRG00000015327	RTCA	100	73.351	Tursiops_truncatus
ENSLACG00000013666	RTCA	94	76.968	ENSUAMG00000017265	RTCA	96	76.968	Ursus_americanus
ENSLACG00000013666	RTCA	100	77.869	ENSUMAG00000007881	RTCA	100	77.869	Ursus_maritimus
ENSLACG00000013666	RTCA	87	69.716	ENSVPAG00000001039	RTCA	84	69.716	Vicugna_pacos
ENSLACG00000013666	RTCA	100	77.869	ENSVVUG00000022041	RTCA	68	77.869	Vulpes_vulpes
ENSLACG00000013666	RTCA	98	61.433	ENSXETG00000031661	RTCA	98	61.433	Xenopus_tropicalis
ENSLACG00000013666	RTCA	100	59.726	ENSXCOG00000008002	rtca	100	59.726	Xiphophorus_couchianus
ENSLACG00000013666	RTCA	100	67.671	ENSXMAG00000005482	rtca	99	67.671	Xiphophorus_maculatus