EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000013898 (Gene tree)
Gene ID: -
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 4195 bases
Position: chrJH127353.1:926343-930537
Accession: 102353912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015780	zf-C2H2	PF00096.26	1.3e-19	1	5
ENSLACP00000015780	zf-C2H2	PF00096.26	1.3e-19	2	5
ENSLACP00000015780	zf-C2H2	PF00096.26	1.3e-19	3	5
ENSLACP00000015780	zf-C2H2	PF00096.26	1.3e-19	4	5
ENSLACP00000015780	zf-C2H2	PF00096.26	1.3e-19	5	5
ENSLACP00000015779	zf-C2H2	PF00096.26	2.1e-13	1	3
ENSLACP00000015779	zf-C2H2	PF00096.26	2.1e-13	2	3
ENSLACP00000015779	zf-C2H2	PF00096.26	2.1e-13	3	3
ENSLACP00000015779	zf-met	PF12874.7	1.2e-05	1	1
ENSLACP00000015780	zf-met	PF12874.7	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000015889	SALL4-201	1683	-	ENSLACP00000015779	560 (aa)	-	H3B1K8
ENSLACT00000015890	SALL4-202	3009	XM_006002368	ENSLACP00000015780	1002 (aa)	XP_006002430	H3B1K9

Gene Model

Click here to download ENSLACG00000013898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000013898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000013898	SALL4	89	73.214	ENSLACG00000014018	-	87	50.943
ENSLACG00000013898	SALL4	81	48.454	ENSLACG00000003556	SALL1	97	48.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000013898	SALL4	100	60.106	ENSG00000101115	SALL4	94	48.138	Homo_sapiens
ENSLACG00000013898	SALL4	99	57.895	ENSAPOG00000002465	sall4	96	47.668	Acanthochromis_polyacanthus
ENSLACG00000013898	SALL4	100	58.889	ENSAMEG00000013250	-	99	49.211	Ailuropoda_melanoleuca
ENSLACG00000013898	SALL4	99	62.921	ENSACIG00000017298	sall4	96	48.330	Amphilophus_citrinellus
ENSLACG00000013898	SALL4	100	58.639	ENSAOCG00000023678	sall4	96	47.822	Amphiprion_ocellaris
ENSLACG00000013898	SALL4	99	58.947	ENSAPEG00000000751	sall4	96	47.822	Amphiprion_percula
ENSLACG00000013898	SALL4	99	56.842	ENSATEG00000024480	sall4	96	47.782	Anabas_testudineus
ENSLACG00000013898	SALL4	100	66.129	ENSAPLG00000006498	SALL4	96	60.223	Anas_platyrhynchos
ENSLACG00000013898	SALL4	100	66.667	ENSACAG00000012748	SALL4	95	57.792	Anolis_carolinensis
ENSLACG00000013898	SALL4	100	61.170	ENSANAG00000023352	SALL4	94	47.584	Aotus_nancymaae
ENSLACG00000013898	SALL4	99	62.921	ENSACLG00000017851	sall4	96	48.659	Astatotilapia_calliptera
ENSLACG00000013898	SALL4	99	63.158	ENSAMXG00000001254	sall4	99	48.820	Astyanax_mexicanus
ENSLACG00000013898	SALL4	100	55.556	ENSBTAG00000003101	SALL4	93	44.486	Bos_taurus
ENSLACG00000013898	SALL4	73	61.702	ENSCJAG00000000591	SALL4	97	48.169	Callithrix_jacchus
ENSLACG00000013898	SALL4	100	62.766	ENSCAFG00000011738	-	94	48.276	Canis_familiaris
ENSLACG00000013898	SALL4	100	62.766	ENSCAFG00020021870	SALL4	94	48.276	Canis_lupus_dingo
ENSLACG00000013898	SALL4	100	57.778	ENSCHIG00000026270	SALL4	93	45.000	Capra_hircus
ENSLACG00000013898	SALL4	100	62.766	ENSTSYG00000007359	SALL4	84	56.667	Carlito_syrichta
ENSLACG00000013898	SALL4	100	60.638	ENSCAPG00000012135	SALL4	94	45.989	Cavia_aperea
ENSLACG00000013898	SALL4	100	59.551	ENSCCAG00000029512	-	88	58.282	Cebus_capucinus
ENSLACG00000013898	SALL4	100	61.170	ENSCATG00000030757	SALL4	94	48.321	Cercocebus_atys
ENSLACG00000013898	SALL4	100	60.638	ENSCLAG00000010479	SALL4	94	45.624	Chinchilla_lanigera
ENSLACG00000013898	SALL4	100	61.170	ENSCSAG00000015269	SALL4	94	48.555	Chlorocebus_sabaeus
ENSLACG00000013898	SALL4	100	69.841	ENSCPBG00000014995	SALL4	99	61.368	Chrysemys_picta_bellii
ENSLACG00000013898	SALL4	100	61.702	ENSCANG00000036463	SALL4	94	48.417	Colobus_angolensis_palliatus
ENSLACG00000013898	SALL4	100	58.889	ENSCGRG00001019569	Sall4	94	43.675	Cricetulus_griseus_chok1gshd
ENSLACG00000013898	SALL4	100	58.889	ENSCGRG00000000462	Sall4	99	54.545	Cricetulus_griseus_crigri
ENSLACG00000013898	SALL4	99	56.842	ENSCSEG00000014604	sall4	96	48.282	Cynoglossus_semilaevis
ENSLACG00000013898	SALL4	99	57.068	ENSCVAG00000010815	sall4	96	47.383	Cyprinodon_variegatus
ENSLACG00000013898	SALL4	99	62.105	ENSDARG00000044485	sall4	96	48.037	Danio_rerio
ENSLACG00000013898	SALL4	100	60.847	ENSDNOG00000040633	SALL4	94	47.075	Dasypus_novemcinctus
ENSLACG00000013898	SALL4	100	57.778	ENSDORG00000012841	Sall4	100	58.333	Dipodomys_ordii
ENSLACG00000013898	SALL4	69	65.116	ENSETEG00000012475	-	55	65.116	Echinops_telfairi
ENSLACG00000013898	SALL4	76	46.939	ENSEBUG00000015425	-	68	46.939	Eptatretus_burgeri
ENSLACG00000013898	SALL4	100	60.638	ENSECAG00000018533	SALL4	94	47.124	Equus_caballus
ENSLACG00000013898	SALL4	100	60.417	ENSEEUG00000003649	SALL4	94	45.802	Erinaceus_europaeus
ENSLACG00000013898	SALL4	99	63.158	ENSELUG00000005696	sall4	99	47.296	Esox_lucius
ENSLACG00000013898	SALL4	100	61.170	ENSFCAG00000002822	SALL4	84	56.667	Felis_catus
ENSLACG00000013898	SALL4	100	65.556	ENSFALG00000013149	SALL4	96	58.796	Ficedula_albicollis
ENSLACG00000013898	SALL4	100	60.638	ENSFDAG00000017812	SALL4	94	45.725	Fukomys_damarensis
ENSLACG00000013898	SALL4	99	57.592	ENSFHEG00000014187	sall4	96	48.289	Fundulus_heteroclitus
ENSLACG00000013898	SALL4	99	66.292	ENSGMOG00000003822	sall4	96	48.519	Gadus_morhua
ENSLACG00000013898	SALL4	100	66.138	ENSGALG00000041365	SALL4	99	59.389	Gallus_gallus
ENSLACG00000013898	SALL4	99	58.854	ENSGAFG00000019925	sall4	96	48.614	Gambusia_affinis
ENSLACG00000013898	SALL4	99	65.556	ENSGACG00000011124	sall4	96	47.212	Gasterosteus_aculeatus
ENSLACG00000013898	SALL4	100	70.899	ENSGAGG00000002297	SALL4	96	60.793	Gopherus_agassizii
ENSLACG00000013898	SALL4	100	60.106	ENSGGOG00000001832	SALL4	95	48.231	Gorilla_gorilla
ENSLACG00000013898	SALL4	99	62.921	ENSHBUG00000007327	sall4	98	48.844	Haplochromis_burtoni
ENSLACG00000013898	SALL4	100	54.082	ENSHGLG00000009043	SALL4	94	45.480	Heterocephalus_glaber_female
ENSLACG00000013898	SALL4	100	54.082	ENSHGLG00100002722	SALL4	94	45.387	Heterocephalus_glaber_male
ENSLACG00000013898	SALL4	99	57.068	ENSHCOG00000008519	sall4	96	47.378	Hippocampus_comes
ENSLACG00000013898	SALL4	99	59.043	ENSIPUG00000019170	sall4	96	48.897	Ictalurus_punctatus
ENSLACG00000013898	SALL4	100	48.421	ENSSTOG00000025002	SALL4	99	68.539	Ictidomys_tridecemlineatus
ENSLACG00000013898	SALL4	100	60.000	ENSJJAG00000020688	Sall4	91	64.286	Jaculus_jaculus
ENSLACG00000013898	SALL4	99	59.474	ENSKMAG00000002501	sall4	96	48.241	Kryptolebias_marmoratus
ENSLACG00000013898	SALL4	99	65.169	ENSLBEG00000019951	sall4	96	47.922	Labrus_bergylta
ENSLACG00000013898	SALL4	99	62.827	ENSLOCG00000002427	sall4	96	54.689	Lepisosteus_oculatus
ENSLACG00000013898	SALL4	100	60.000	ENSLAFG00000004309	SALL4	94	48.471	Loxodonta_africana
ENSLACG00000013898	SALL4	100	61.170	ENSMFAG00000027169	SALL4	94	48.321	Macaca_fascicularis
ENSLACG00000013898	SALL4	93	61.170	ENSMMUG00000003870	SALL4	100	47.445	Macaca_mulatta
ENSLACG00000013898	SALL4	93	61.170	ENSMNEG00000035995	SALL4	100	47.445	Macaca_nemestrina
ENSLACG00000013898	SALL4	100	61.702	ENSMLEG00000030467	SALL4	94	48.414	Mandrillus_leucophaeus
ENSLACG00000013898	SALL4	99	65.556	ENSMAMG00000005223	sall4	96	47.580	Mastacembelus_armatus
ENSLACG00000013898	SALL4	99	62.921	ENSMZEG00005023418	sall4	96	48.659	Maylandia_zebra
ENSLACG00000013898	SALL4	72	65.556	ENSMGAG00000009344	SALL4	94	61.477	Meleagris_gallopavo
ENSLACG00000013898	SALL4	100	58.889	ENSMAUG00000015814	Sall4	99	67.033	Mesocricetus_auratus
ENSLACG00000013898	SALL4	100	62.234	ENSMICG00000000027	SALL4	85	56.667	Microcebus_murinus
ENSLACG00000013898	SALL4	100	58.730	ENSMOCG00000018245	Sall4	99	68.000	Microtus_ochrogaster
ENSLACG00000013898	SALL4	99	59.474	ENSMMOG00000014929	sall4	96	47.725	Mola_mola
ENSLACG00000013898	SALL4	100	66.667	ENSMODG00000016387	SALL4	91	53.889	Monodelphis_domestica
ENSLACG00000013898	SALL4	99	56.021	ENSMALG00000018709	sall4	99	48.289	Monopterus_albus
ENSLACG00000013898	SALL4	100	59.259	MGP_CAROLIEiJ_G0024723	Sall4	99	56.198	Mus_caroli
ENSLACG00000013898	SALL4	100	58.889	ENSMUSG00000027547	Sall4	99	56.198	Mus_musculus
ENSLACG00000013898	SALL4	100	58.889	MGP_PahariEiJ_G0026164	Sall4	99	57.025	Mus_pahari
ENSLACG00000013898	SALL4	100	58.889	MGP_SPRETEiJ_G0025643	Sall4	99	56.198	Mus_spretus
ENSLACG00000013898	SALL4	100	61.702	ENSMPUG00000017543	SALL4	90	47.097	Mustela_putorius_furo
ENSLACG00000013898	SALL4	99	47.399	ENSMLUG00000028073	-	95	35.853	Myotis_lucifugus
ENSLACG00000013898	SALL4	100	63.298	ENSMLUG00000007060	-	98	47.300	Myotis_lucifugus
ENSLACG00000013898	SALL4	100	57.778	ENSMLUG00000008405	-	96	43.955	Myotis_lucifugus
ENSLACG00000013898	SALL4	100	58.730	ENSNGAG00000017833	Sall4	85	56.667	Nannospalax_galili
ENSLACG00000013898	SALL4	99	62.921	ENSNBRG00000001829	sall4	96	48.257	Neolamprologus_brichardi
ENSLACG00000013898	SALL4	100	60.106	ENSNLEG00000007013	SALL4	94	47.814	Nomascus_leucogenys
ENSLACG00000013898	SALL4	77	66.667	ENSMEUG00000005793	-	95	51.602	Notamacropus_eugenii
ENSLACG00000013898	SALL4	100	59.043	ENSOPRG00000011640	SALL4	93	45.968	Ochotona_princeps
ENSLACG00000013898	SALL4	99	62.921	ENSONIG00000016557	sall4	96	48.148	Oreochromis_niloticus
ENSLACG00000013898	SALL4	100	70.053	ENSOANG00000008667	SALL4	93	58.653	Ornithorhynchus_anatinus
ENSLACG00000013898	SALL4	100	58.511	ENSOCUG00000011797	SALL4	97	46.549	Oryctolagus_cuniculus
ENSLACG00000013898	SALL4	99	63.158	ENSORLG00000016130	sall4	96	47.212	Oryzias_latipes
ENSLACG00000013898	SALL4	99	63.158	ENSORLG00020007339	sall4	96	46.834	Oryzias_latipes_hni
ENSLACG00000013898	SALL4	99	63.158	ENSORLG00015002265	sall4	96	47.119	Oryzias_latipes_hsok
ENSLACG00000013898	SALL4	99	60.209	ENSOMEG00000017344	sall4	96	47.432	Oryzias_melastigma
ENSLACG00000013898	SALL4	100	61.702	ENSOGAG00000013799	SALL4	99	49.069	Otolemur_garnettii
ENSLACG00000013898	SALL4	100	58.889	ENSOARG00000014570	SALL4	94	44.867	Ovis_aries
ENSLACG00000013898	SALL4	100	60.106	ENSPPAG00000038064	SALL4	95	47.952	Pan_paniscus
ENSLACG00000013898	SALL4	100	61.702	ENSPPRG00000008677	SALL4	94	46.944	Panthera_pardus
ENSLACG00000013898	SALL4	100	60.106	ENSPTRG00000013631	SALL4	95	48.048	Pan_troglodytes
ENSLACG00000013898	SALL4	93	61.170	ENSPANG00000021792	SALL4	100	47.445	Papio_anubis
ENSLACG00000013898	SALL4	99	60.194	ENSPKIG00000007074	sall4	96	50.416	Paramormyrops_kingsleyae
ENSLACG00000013898	SALL4	100	70.000	ENSPSIG00000009066	SALL4	96	60.609	Pelodiscus_sinensis
ENSLACG00000013898	SALL4	99	59.434	ENSPMGG00000022551	sall4	96	46.190	Periophthalmus_magnuspinnatus
ENSLACG00000013898	SALL4	100	58.889	ENSPEMG00000022706	Sall4	99	74.684	Peromyscus_maniculatus_bairdii
ENSLACG00000013898	SALL4	100	66.667	ENSPCIG00000022838	SALL4	91	56.063	Phascolarctos_cinereus
ENSLACG00000013898	SALL4	99	59.162	ENSPFOG00000001442	sall4	96	48.196	Poecilia_formosa
ENSLACG00000013898	SALL4	99	58.639	ENSPLAG00000008760	sall4	96	48.104	Poecilia_latipinna
ENSLACG00000013898	SALL4	99	59.162	ENSPMEG00000008497	sall4	96	48.011	Poecilia_mexicana
ENSLACG00000013898	SALL4	99	59.162	ENSPREG00000021140	sall4	96	48.056	Poecilia_reticulata
ENSLACG00000013898	SALL4	100	59.574	ENSPPYG00000011138	SALL4	94	48.138	Pongo_abelii
ENSLACG00000013898	SALL4	100	60.000	ENSPCAG00000004726	SALL4	93	44.568	Procavia_capensis
ENSLACG00000013898	SALL4	100	61.702	ENSPCOG00000016321	SALL4	94	47.447	Propithecus_coquereli
ENSLACG00000013898	SALL4	88	60.833	ENSPVAG00000002075	SALL4	88	45.328	Pteropus_vampyrus
ENSLACG00000013898	SALL4	99	62.921	ENSPNYG00000021738	sall4	96	48.474	Pundamilia_nyererei
ENSLACG00000013898	SALL4	99	63.158	ENSPNAG00000020929	sall4	96	49.632	Pygocentrus_nattereri
ENSLACG00000013898	SALL4	100	57.778	ENSRNOG00000050035	Sall4	96	56.897	Rattus_norvegicus
ENSLACG00000013898	SALL4	100	61.170	ENSRBIG00000039876	SALL4	100	47.353	Rhinopithecus_bieti
ENSLACG00000013898	SALL4	100	61.170	ENSRROG00000036585	SALL4	94	48.369	Rhinopithecus_roxellana
ENSLACG00000013898	SALL4	100	61.170	ENSSBOG00000030011	SALL4	94	47.774	Saimiri_boliviensis_boliviensis
ENSLACG00000013898	SALL4	100	66.667	ENSSHAG00000018013	SALL4	91	54.630	Sarcophilus_harrisii
ENSLACG00000013898	SALL4	99	63.158	ENSSFOG00015021075	sall4	97	50.140	Scleropages_formosus
ENSLACG00000013898	SALL4	99	57.143	ENSSMAG00000019218	sall4	96	47.689	Scophthalmus_maximus
ENSLACG00000013898	SALL4	99	59.474	ENSSDUG00000004657	sall4	98	48.336	Seriola_dumerili
ENSLACG00000013898	SALL4	99	58.947	ENSSLDG00000004973	sall4	96	48.619	Seriola_lalandi_dorsalis
ENSLACG00000013898	SALL4	99	58.421	ENSSPAG00000001978	sall4	96	47.456	Stegastes_partitus
ENSLACG00000013898	SALL4	100	58.889	ENSSSCG00000007479	SALL4	94	46.561	Sus_scrofa
ENSLACG00000013898	SALL4	99	57.672	ENSTRUG00000007410	sall4	96	47.535	Takifugu_rubripes
ENSLACG00000013898	SALL4	99	63.158	ENSTNIG00000012460	sall4	96	47.989	Tetraodon_nigroviridis
ENSLACG00000013898	SALL4	100	62.234	ENSTTRG00000007753	SALL4	98	44.921	Tursiops_truncatus
ENSLACG00000013898	SALL4	100	58.889	ENSUAMG00000010113	SALL4	94	47.725	Ursus_americanus
ENSLACG00000013898	SALL4	100	58.889	ENSUMAG00000024274	SALL4	97	47.227	Ursus_maritimus
ENSLACG00000013898	SALL4	100	62.903	ENSXETG00000012326	sall4	96	55.243	Xenopus_tropicalis
ENSLACG00000013898	SALL4	99	58.621	ENSXCOG00000015467	sall4	96	47.913	Xiphophorus_couchianus
ENSLACG00000013898	SALL4	99	57.432	ENSXMAG00000012692	sall4	96	48.197	Xiphophorus_maculatus