EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000014018 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 4936 bases
Position: chrJH127241.1:947838-952773
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015919	zf-C2H2	PF00096.26	8e-25	1	5
ENSLACP00000015919	zf-C2H2	PF00096.26	8e-25	2	5
ENSLACP00000015919	zf-C2H2	PF00096.26	8e-25	3	5
ENSLACP00000015919	zf-C2H2	PF00096.26	8e-25	4	5
ENSLACP00000015919	zf-C2H2	PF00096.26	8e-25	5	5
ENSLACP00000015919	zf-met	PF12874.7	9e-14	1	3
ENSLACP00000015919	zf-met	PF12874.7	9e-14	2	3
ENSLACP00000015919	zf-met	PF12874.7	9e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016029	-	3636	-	ENSLACP00000015919	1212 (aa)	-	H3B1Z8

Gene Model

Click here to download ENSLACG00000014018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000014018	-	70	43.595	ENSLACG00000003556	SALL1	60	41.457
ENSLACG00000014018	-	62	46.154	ENSLACG00000017381	-	88	44.643
ENSLACG00000014018	-	56	33.721	ENSLACG00000022211	-	76	46.429
ENSLACG00000014018	-	87	50.943	ENSLACG00000013898	SALL4	89	73.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014018	-	99	38.800	ENSG00000103449	SALL1	97	39.803	Homo_sapiens
ENSLACG00000014018	-	93	39.176	ENSAPOG00000022764	sall1a	97	38.240	Acanthochromis_polyacanthus
ENSLACG00000014018	-	93	40.049	ENSAMEG00000006817	SALL1	97	39.117	Ailuropoda_melanoleuca
ENSLACG00000014018	-	93	38.736	ENSACIG00000004231	sall1a	97	38.515	Amphilophus_citrinellus
ENSLACG00000014018	-	93	39.257	ENSAOCG00000002800	sall1a	97	38.218	Amphiprion_ocellaris
ENSLACG00000014018	-	93	39.257	ENSAPEG00000010179	sall1a	97	38.142	Amphiprion_percula
ENSLACG00000014018	-	93	39.803	ENSATEG00000003006	sall1a	99	38.956	Anabas_testudineus
ENSLACG00000014018	-	93	40.228	ENSAPLG00000003356	SALL1	97	39.240	Anas_platyrhynchos
ENSLACG00000014018	-	99	40.604	ENSACAG00000014399	SALL1	95	40.649	Anolis_carolinensis
ENSLACG00000014018	-	99	38.847	ENSANAG00000027238	SALL1	97	39.939	Aotus_nancymaae
ENSLACG00000014018	-	93	39.476	ENSACLG00000017148	sall1a	97	38.456	Astatotilapia_calliptera
ENSLACG00000014018	-	93	38.866	ENSAMXG00000018599	sall1a	92	39.216	Astyanax_mexicanus
ENSLACG00000014018	-	96	35.945	ENSAMXG00000017702	sall1b	95	36.761	Astyanax_mexicanus
ENSLACG00000014018	-	93	40.980	ENSBTAG00000008544	SALL1	97	39.969	Bos_taurus
ENSLACG00000014018	-	99	38.707	ENSCJAG00000001740	SALL1	97	39.502	Callithrix_jacchus
ENSLACG00000014018	-	93	36.842	ENSCAFG00000009755	SALL1	97	39.605	Canis_familiaris
ENSLACG00000014018	-	82	42.488	ENSCAFG00020002842	SALL1	97	39.605	Canis_lupus_dingo
ENSLACG00000014018	-	93	41.162	ENSCHIG00000026074	SALL1	98	40.247	Capra_hircus
ENSLACG00000014018	-	99	39.969	ENSTSYG00000029464	SALL1	97	39.969	Carlito_syrichta
ENSLACG00000014018	-	93	40.861	ENSCPOG00000006564	SALL1	99	40.442	Cavia_porcellus
ENSLACG00000014018	-	99	38.673	ENSCCAG00000001639	SALL1	97	39.588	Cebus_capucinus
ENSLACG00000014018	-	99	38.851	ENSCATG00000004982	SALL1	97	39.848	Cercocebus_atys
ENSLACG00000014018	-	93	40.965	ENSCLAG00000006380	SALL1	97	40.076	Chinchilla_lanigera
ENSLACG00000014018	-	99	38.508	ENSCSAG00000005319	SALL1	97	39.408	Chlorocebus_sabaeus
ENSLACG00000014018	-	66	61.538	ENSCHOG00000000800	-	56	61.538	Choloepus_hoffmanni
ENSLACG00000014018	-	91	61.538	ENSCPBG00000015924	SALL1	92	61.538	Chrysemys_picta_bellii
ENSLACG00000014018	-	99	38.537	ENSCANG00000036664	SALL1	98	40.357	Colobus_angolensis_palliatus
ENSLACG00000014018	-	93	40.735	ENSCGRG00001023314	-	97	40.168	Cricetulus_griseus_chok1gshd
ENSLACG00000014018	-	93	40.984	ENSCGRG00000009496	Sall1	99	40.214	Cricetulus_griseus_crigri
ENSLACG00000014018	-	93	39.968	ENSCSEG00000009349	sall1a	97	38.614	Cynoglossus_semilaevis
ENSLACG00000014018	-	88	61.538	ENSCVAG00000020513	sall1a	96	61.538	Cyprinodon_variegatus
ENSLACG00000014018	-	91	35.567	ENSDARG00000075891	sall1b	95	35.181	Danio_rerio
ENSLACG00000014018	-	93	38.817	ENSDARG00000074319	sall1a	97	37.905	Danio_rerio
ENSLACG00000014018	-	93	40.681	ENSDNOG00000016413	SALL1	97	39.970	Dasypus_novemcinctus
ENSLACG00000014018	-	93	40.831	ENSETEG00000015150	SALL1	99	39.666	Echinops_telfairi
ENSLACG00000014018	-	60	37.957	ENSEBUG00000008798	SALL1	76	34.510	Eptatretus_burgeri
ENSLACG00000014018	-	93	40.016	ENSEASG00005014602	SALL1	97	40.046	Equus_asinus_asinus
ENSLACG00000014018	-	91	38.679	ENSECAG00000011334	SALL1	97	39.574	Equus_caballus
ENSLACG00000014018	-	93	39.870	ENSEEUG00000002014	SALL1	99	39.634	Erinaceus_europaeus
ENSLACG00000014018	-	58	38.462	ENSELUG00000017774	-	98	34.779	Esox_lucius
ENSLACG00000014018	-	93	41.693	ENSELUG00000006159	sall1a	86	61.538	Esox_lucius
ENSLACG00000014018	-	93	39.627	ENSFCAG00000024654	SALL1	97	39.447	Felis_catus
ENSLACG00000014018	-	99	40.198	ENSFALG00000000074	SALL1	97	40.076	Ficedula_albicollis
ENSLACG00000014018	-	93	39.429	ENSFHEG00000012579	sall1a	92	39.300	Fundulus_heteroclitus
ENSLACG00000014018	-	67	59.615	ENSFHEG00000008424	-	84	61.538	Fundulus_heteroclitus
ENSLACG00000014018	-	71	61.538	ENSGMOG00000013383	-	75	61.538	Gadus_morhua
ENSLACG00000014018	-	93	38.462	ENSGMOG00000006103	sall1a	59	40.127	Gadus_morhua
ENSLACG00000014018	-	93	40.605	ENSGALG00000039238	SALL1	97	39.693	Gallus_gallus
ENSLACG00000014018	-	93	38.375	ENSGAFG00000009964	sall1a	97	37.785	Gambusia_affinis
ENSLACG00000014018	-	93	39.382	ENSGACG00000016702	sall1a	92	39.323	Gasterosteus_aculeatus
ENSLACG00000014018	-	99	40.401	ENSGAGG00000013979	SALL1	99	40.714	Gopherus_agassizii
ENSLACG00000014018	-	99	38.800	ENSGGOG00000000663	SALL1	97	39.803	Gorilla_gorilla
ENSLACG00000014018	-	93	39.476	ENSHBUG00000022005	sall1a	59	43.014	Haplochromis_burtoni
ENSLACG00000014018	-	93	40.408	ENSHGLG00000004288	-	97	40.489	Heterocephalus_glaber_female
ENSLACG00000014018	-	93	40.408	ENSHGLG00100017496	SALL1	97	40.489	Heterocephalus_glaber_male
ENSLACG00000014018	-	98	39.174	ENSHCOG00000000974	sall1a	97	39.488	Hippocampus_comes
ENSLACG00000014018	-	93	39.886	ENSIPUG00000016265	SALL1	92	39.692	Ictalurus_punctatus
ENSLACG00000014018	-	93	35.452	ENSIPUG00000022928	sall1b	91	35.609	Ictalurus_punctatus
ENSLACG00000014018	-	93	40.576	ENSSTOG00000020885	SALL1	97	39.954	Ictidomys_tridecemlineatus
ENSLACG00000014018	-	93	39.330	ENSKMAG00000016681	sall1a	97	37.785	Kryptolebias_marmoratus
ENSLACG00000014018	-	93	38.399	ENSLBEG00000012207	sall1a	96	37.727	Labrus_bergylta
ENSLACG00000014018	-	93	40.714	ENSLOCG00000007283	sall1b	92	40.160	Lepisosteus_oculatus
ENSLACG00000014018	-	93	40.098	ENSLAFG00000015251	SALL1	99	39.332	Loxodonta_africana
ENSLACG00000014018	-	99	38.939	ENSMFAG00000003298	SALL1	97	39.364	Macaca_fascicularis
ENSLACG00000014018	-	88	40.975	ENSMMUG00000017200	SALL1	98	40.129	Macaca_mulatta
ENSLACG00000014018	-	88	40.975	ENSMNEG00000034770	SALL1	98	40.129	Macaca_nemestrina
ENSLACG00000014018	-	99	38.927	ENSMLEG00000036406	SALL1	97	39.879	Mandrillus_leucophaeus
ENSLACG00000014018	-	93	39.429	ENSMAMG00000004164	sall1a	59	42.403	Mastacembelus_armatus
ENSLACG00000014018	-	93	39.476	ENSMZEG00005006479	sall1a	99	39.597	Maylandia_zebra
ENSLACG00000014018	-	93	40.394	ENSMGAG00000004704	SALL1	99	39.329	Meleagris_gallopavo
ENSLACG00000014018	-	93	41.311	ENSMAUG00000019093	Sall1	97	40.474	Mesocricetus_auratus
ENSLACG00000014018	-	99	40.382	ENSMICG00000036486	SALL1	97	40.213	Microcebus_murinus
ENSLACG00000014018	-	93	38.849	ENSMMOG00000016400	sall1a	92	39.234	Mola_mola
ENSLACG00000014018	-	98	41.022	ENSMODG00000013114	SALL1	96	40.775	Monodelphis_domestica
ENSLACG00000014018	-	93	39.607	ENSMALG00000013400	sall1a	97	38.444	Monopterus_albus
ENSLACG00000014018	-	93	39.920	MGP_CAROLIEiJ_G0031362	Sall1	97	39.334	Mus_caroli
ENSLACG00000014018	-	93	39.936	ENSMUSG00000031665	Sall1	97	39.426	Mus_musculus
ENSLACG00000014018	-	93	39.647	MGP_PahariEiJ_G0022961	Sall1	97	38.595	Mus_pahari
ENSLACG00000014018	-	93	39.936	MGP_SPRETEiJ_G0032480	Sall1	97	39.275	Mus_spretus
ENSLACG00000014018	-	93	40.541	ENSMPUG00000003265	SALL1	95	39.496	Mustela_putorius_furo
ENSLACG00000014018	-	67	44.746	ENSMLUG00000015541	SALL1	99	38.859	Myotis_lucifugus
ENSLACG00000014018	-	93	39.558	ENSNBRG00000009307	sall1a	99	39.335	Neolamprologus_brichardi
ENSLACG00000014018	-	94	61.538	ENSNLEG00000001008	SALL1	98	61.538	Nomascus_leucogenys
ENSLACG00000014018	-	98	41.176	ENSMEUG00000012206	SALL1	96	40.930	Notamacropus_eugenii
ENSLACG00000014018	-	72	61.538	ENSOPRG00000005645	SALL1	71	61.538	Ochotona_princeps
ENSLACG00000014018	-	93	40.306	ENSODEG00000003685	SALL1	97	40.198	Octodon_degus
ENSLACG00000014018	-	88	61.538	ENSONIG00000002831	sall1a	97	38.640	Oreochromis_niloticus
ENSLACG00000014018	-	77	61.538	ENSOANG00000013399	SALL1	77	61.538	Ornithorhynchus_anatinus
ENSLACG00000014018	-	93	39.968	ENSORLG00000013827	sall1a	60	40.868	Oryzias_latipes
ENSLACG00000014018	-	99	38.766	ENSORLG00015018830	sall1a	60	40.868	Oryzias_latipes_hsok
ENSLACG00000014018	-	93	39.450	ENSOMEG00000016043	sall1a	60	40.755	Oryzias_melastigma
ENSLACG00000014018	-	99	40.473	ENSOGAG00000027316	SALL1	97	40.563	Otolemur_garnettii
ENSLACG00000014018	-	93	37.397	ENSOARG00000017583	SALL1	97	37.365	Ovis_aries
ENSLACG00000014018	-	99	38.648	ENSPPAG00000035657	SALL1	99	39.683	Pan_paniscus
ENSLACG00000014018	-	96	31.153	ENSPPAG00000035136	-	95	31.357	Pan_paniscus
ENSLACG00000014018	-	67	44.707	ENSPPRG00000023283	SALL1	97	39.160	Panthera_pardus
ENSLACG00000014018	-	79	61.538	ENSPTIG00000013539	-	94	61.538	Panthera_tigris_altaica
ENSLACG00000014018	-	99	38.771	ENSPTRG00000008108	SALL1	97	39.544	Pan_troglodytes
ENSLACG00000014018	-	96	31.138	ENSPTRG00000045256	-	96	31.751	Pan_troglodytes
ENSLACG00000014018	-	99	38.973	ENSPANG00000024176	SALL1	97	39.924	Papio_anubis
ENSLACG00000014018	-	99	38.219	ENSPKIG00000005383	-	60	41.592	Paramormyrops_kingsleyae
ENSLACG00000014018	-	92	37.581	ENSPKIG00000022251	sall1a	95	37.608	Paramormyrops_kingsleyae
ENSLACG00000014018	-	99	39.801	ENSPSIG00000008582	SALL1	97	39.801	Pelodiscus_sinensis
ENSLACG00000014018	-	68	43.512	ENSPMGG00000021788	sall1a	96	37.771	Periophthalmus_magnuspinnatus
ENSLACG00000014018	-	88	63.462	ENSPMAG00000008148	sall1b	91	35.914	Petromyzon_marinus
ENSLACG00000014018	-	98	41.176	ENSPCIG00000017840	SALL1	96	40.930	Phascolarctos_cinereus
ENSLACG00000014018	-	93	38.449	ENSPFOG00000015799	sall1a	95	37.850	Poecilia_formosa
ENSLACG00000014018	-	93	38.406	ENSPLAG00000022539	sall1a	97	37.756	Poecilia_latipinna
ENSLACG00000014018	-	93	38.449	ENSPMEG00000020894	sall1a	97	37.850	Poecilia_mexicana
ENSLACG00000014018	-	93	38.430	ENSPREG00000006802	sall1a	99	37.881	Poecilia_reticulata
ENSLACG00000014018	-	88	61.538	ENSPPYG00000007345	SALL1	91	61.538	Pongo_abelii
ENSLACG00000014018	-	79	63.462	ENSPCAG00000008162	SALL1	86	63.462	Procavia_capensis
ENSLACG00000014018	-	99	39.801	ENSPCOG00000028192	SALL1	97	39.450	Propithecus_coquereli
ENSLACG00000014018	-	63	52.308	ENSPVAG00000015374	SALL1	100	52.308	Pteropus_vampyrus
ENSLACG00000014018	-	93	39.476	ENSPNYG00000010865	sall1a	97	38.456	Pundamilia_nyererei
ENSLACG00000014018	-	93	38.177	ENSPNAG00000023644	sall1a	91	37.971	Pygocentrus_nattereri
ENSLACG00000014018	-	93	37.428	ENSPNAG00000007442	sall1b	91	36.438	Pygocentrus_nattereri
ENSLACG00000014018	-	51	61.538	ENSPNAG00000028248	-	77	61.538	Pygocentrus_nattereri
ENSLACG00000014018	-	99	39.740	ENSRNOG00000013907	Sall1	97	39.634	Rattus_norvegicus
ENSLACG00000014018	-	88	40.870	ENSRBIG00000015707	SALL1	98	40.210	Rhinopithecus_bieti
ENSLACG00000014018	-	99	38.776	ENSRROG00000035777	SALL1	99	39.607	Rhinopithecus_roxellana
ENSLACG00000014018	-	99	38.906	ENSSBOG00000032186	SALL1	97	39.863	Saimiri_boliviensis_boliviensis
ENSLACG00000014018	-	98	40.916	ENSSHAG00000009477	SALL1	96	40.637	Sarcophilus_harrisii
ENSLACG00000014018	-	96	38.898	ENSSFOG00015001590	sall1a	61	41.074	Scleropages_formosus
ENSLACG00000014018	-	98	38.628	ENSSFOG00015020020	sall1a	96	38.687	Scleropages_formosus
ENSLACG00000014018	-	93	38.356	ENSSMAG00000009160	sall1a	97	38.023	Scophthalmus_maximus
ENSLACG00000014018	-	59	50.794	ENSSDUG00000000748	sall1b	96	50.794	Seriola_dumerili
ENSLACG00000014018	-	93	39.739	ENSSDUG00000006507	sall1a	99	38.743	Seriola_dumerili
ENSLACG00000014018	-	93	39.577	ENSSLDG00000017721	sall1a	97	38.211	Seriola_lalandi_dorsalis
ENSLACG00000014018	-	93	41.009	ENSSARG00000000661	SALL1	99	40.520	Sorex_araneus
ENSLACG00000014018	-	99	39.848	ENSSPUG00000000156	SALL1	97	39.773	Sphenodon_punctatus
ENSLACG00000014018	-	93	39.709	ENSSPAG00000021615	sall1a	97	38.889	Stegastes_partitus
ENSLACG00000014018	-	91	44.118	ENSSSCG00000002836	SALL1	95	44.118	Sus_scrofa
ENSLACG00000014018	-	99	40.076	ENSTGUG00000007514	SALL1	97	40.000	Taeniopygia_guttata
ENSLACG00000014018	-	63	61.538	ENSTRUG00000008950	sall1a	90	61.538	Takifugu_rubripes
ENSLACG00000014018	-	90	38.115	ENSTNIG00000004257	sall1a	97	39.262	Tetraodon_nigroviridis
ENSLACG00000014018	-	58	59.184	ENSTBEG00000002119	-	52	59.184	Tupaia_belangeri
ENSLACG00000014018	-	89	38.721	ENSUAMG00000023379	-	91	38.577	Ursus_americanus
ENSLACG00000014018	-	88	61.538	ENSVVUG00000019383	-	96	61.538	Vulpes_vulpes
ENSLACG00000014018	-	99	38.919	ENSXETG00000018417	sall1	58	41.858	Xenopus_tropicalis
ENSLACG00000014018	-	94	45.648	ENSXETG00000017176	sall2	94	45.702	Xenopus_tropicalis
ENSLACG00000014018	-	93	38.579	ENSXMAG00000016273	sall1a	99	38.474	Xiphophorus_maculatus