EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014025 (Gene tree)
Gene ID: 102360027
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 20697 bases
Position: chrJH126781.1:948575-969271
Accession: 102360027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015928	TruB_N	PF01509.18	4e-22	1	1
ENSLACP00000015927	TruB_N	PF01509.18	5.7e-22	1	1
ENSLACP00000015927	PUA	PF01472.20	4.7e-18	1	1
ENSLACP00000015928	PUA	PF01472.20	5.3e-18	1	1
ENSLACP00000015928	DKCLD	PF08068.12	4.2e-32	1	1
ENSLACP00000015927	DKCLD	PF08068.12	5.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016038	DKC1-202	1317	-	ENSLACP00000015928	439 (aa)	-	H3B207
ENSLACT00000016037	DKC1-201	5419	XM_005994735	ENSLACP00000015927	506 (aa)	XP_005994797	H3B206

Gene Model

Click here to download ENSLACG00000014025's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014025	DKC1	91	88.693	ENSG00000130826	DKC1	99	89.268	Homo_sapiens
ENSLACG00000014025	DKC1	90	87.595	ENSAPOG00000007799	dkc1	90	81.223	Acanthochromis_polyacanthus
ENSLACG00000014025	DKC1	91	88.945	ENSAMEG00000002776	DKC1	80	88.395	Ailuropoda_melanoleuca
ENSLACG00000014025	DKC1	95	84.615	ENSACIG00000022614	dkc1	87	84.615	Amphilophus_citrinellus
ENSLACG00000014025	DKC1	90	88.041	ENSAOCG00000013159	dkc1	88	82.110	Amphiprion_ocellaris
ENSLACG00000014025	DKC1	90	88.041	ENSAPEG00000002284	dkc1	90	81.659	Amphiprion_percula
ENSLACG00000014025	DKC1	91	84.938	ENSATEG00000013682	dkc1	86	80.813	Anabas_testudineus
ENSLACG00000014025	DKC1	91	89.950	ENSACAG00000015600	DKC1	79	82.609	Anolis_carolinensis
ENSLACG00000014025	DKC1	91	89.196	ENSANAG00000022732	DKC1	85	83.636	Aotus_nancymaae
ENSLACG00000014025	DKC1	91	85.714	ENSACLG00000015605	dkc1	83	84.729	Astatotilapia_calliptera
ENSLACG00000014025	DKC1	94	86.473	ENSAMXG00000017108	dkc1	87	83.260	Astyanax_mexicanus
ENSLACG00000014025	DKC1	91	88.442	ENSBTAG00000013045	DKC1	88	81.292	Bos_taurus
ENSLACG00000014025	DKC1	92	66.253	WBGene00010478	K01G5.5	92	65.366	Caenorhabditis_elegans
ENSLACG00000014025	DKC1	91	88.693	ENSCJAG00000004210	DKC1	87	81.737	Callithrix_jacchus
ENSLACG00000014025	DKC1	90	79.747	ENSCAFG00000009311	-	79	79.052	Canis_familiaris
ENSLACG00000014025	DKC1	91	88.442	ENSCAFG00000019620	-	77	88.442	Canis_familiaris
ENSLACG00000014025	DKC1	90	78.481	ENSCAFG00020009379	-	77	76.755	Canis_lupus_dingo
ENSLACG00000014025	DKC1	91	88.442	ENSCAFG00020008918	-	77	88.442	Canis_lupus_dingo
ENSLACG00000014025	DKC1	91	88.693	ENSCHIG00000017392	DKC1	88	81.737	Capra_hircus
ENSLACG00000014025	DKC1	91	88.693	ENSTSYG00000007681	DKC1	86	80.921	Carlito_syrichta
ENSLACG00000014025	DKC1	83	88.798	ENSCAPG00000003342	DKC1	93	82.367	Cavia_aperea
ENSLACG00000014025	DKC1	91	88.945	ENSCPOG00000008825	DKC1	86	82.735	Cavia_porcellus
ENSLACG00000014025	DKC1	91	78.141	ENSCCAG00000027418	DKC1	86	72.606	Cebus_capucinus
ENSLACG00000014025	DKC1	91	88.191	ENSCATG00000033602	DKC1	87	81.737	Cercocebus_atys
ENSLACG00000014025	DKC1	91	88.945	ENSCLAG00000000720	DKC1	87	82.883	Chinchilla_lanigera
ENSLACG00000014025	DKC1	91	88.191	ENSCSAG00000006706	DKC1	87	81.737	Chlorocebus_sabaeus
ENSLACG00000014025	DKC1	91	89.950	ENSCPBG00000005858	DKC1	95	84.459	Chrysemys_picta_bellii
ENSLACG00000014025	DKC1	89	80.612	ENSCING00000004599	-	82	76.267	Ciona_intestinalis
ENSLACG00000014025	DKC1	89	80.513	ENSCSAVG00000010047	-	93	77.108	Ciona_savignyi
ENSLACG00000014025	DKC1	91	88.191	ENSCANG00000027987	DKC1	87	81.737	Colobus_angolensis_palliatus
ENSLACG00000014025	DKC1	91	88.191	ENSCGRG00001014574	-	87	81.069	Cricetulus_griseus_chok1gshd
ENSLACG00000014025	DKC1	88	68.394	ENSCGRG00001016789	-	79	69.919	Cricetulus_griseus_chok1gshd
ENSLACG00000014025	DKC1	88	68.394	ENSCGRG00000014809	-	77	69.919	Cricetulus_griseus_crigri
ENSLACG00000014025	DKC1	91	88.191	ENSCGRG00000016075	-	87	81.069	Cricetulus_griseus_crigri
ENSLACG00000014025	DKC1	92	86.600	ENSCSEG00000012633	dkc1	85	86.683	Cynoglossus_semilaevis
ENSLACG00000014025	DKC1	90	87.277	ENSCVAG00000010155	dkc1	87	80.222	Cyprinodon_variegatus
ENSLACG00000014025	DKC1	91	87.940	ENSDARG00000016484	dkc1	79	87.940	Danio_rerio
ENSLACG00000014025	DKC1	91	89.447	ENSDNOG00000004218	DKC1	87	82.628	Dasypus_novemcinctus
ENSLACG00000014025	DKC1	64	74.194	ENSDORG00000013566	-	92	74.194	Dipodomys_ordii
ENSLACG00000014025	DKC1	91	72.111	FBgn0259937	Nop60B	98	65.766	Drosophila_melanogaster
ENSLACG00000014025	DKC1	91	87.688	ENSETEG00000016095	DKC1	81	87.688	Echinops_telfairi
ENSLACG00000014025	DKC1	73	78.125	ENSEBUG00000015962	dkc1	99	78.498	Eptatretus_burgeri
ENSLACG00000014025	DKC1	91	88.693	ENSEASG00005007484	DKC1	88	80.525	Equus_asinus_asinus
ENSLACG00000014025	DKC1	91	88.693	ENSECAG00000023524	DKC1	88	80.525	Equus_caballus
ENSLACG00000014025	DKC1	89	88.205	ENSEEUG00000003323	DKC1	99	83.688	Erinaceus_europaeus
ENSLACG00000014025	DKC1	95	86.571	ENSELUG00000014538	dkc1	89	82.237	Esox_lucius
ENSLACG00000014025	DKC1	91	88.945	ENSFCAG00000006577	DKC1	83	85.782	Felis_catus
ENSLACG00000014025	DKC1	95	85.681	ENSFALG00000011496	DKC1	88	81.917	Ficedula_albicollis
ENSLACG00000014025	DKC1	94	86.683	ENSFDAG00000002516	DKC1	88	82.232	Fukomys_damarensis
ENSLACG00000014025	DKC1	90	86.616	ENSFHEG00000004627	dkc1	99	76.331	Fundulus_heteroclitus
ENSLACG00000014025	DKC1	89	84.655	ENSGMOG00000017277	dkc1	100	84.655	Gadus_morhua
ENSLACG00000014025	DKC1	91	89.447	ENSGALG00000005054	DKC1	95	82.004	Gallus_gallus
ENSLACG00000014025	DKC1	90	86.329	ENSGAFG00000011486	dkc1	74	81.293	Gambusia_affinis
ENSLACG00000014025	DKC1	91	87.186	ENSGACG00000004373	dkc1	96	89.666	Gasterosteus_aculeatus
ENSLACG00000014025	DKC1	91	90.452	ENSGAGG00000011330	DKC1	90	83.405	Gopherus_agassizii
ENSLACG00000014025	DKC1	91	88.693	ENSGGOG00000001045	DKC1	87	81.960	Gorilla_gorilla
ENSLACG00000014025	DKC1	91	85.464	ENSHBUG00000012436	dkc1	91	79.303	Haplochromis_burtoni
ENSLACG00000014025	DKC1	91	87.940	ENSHGLG00000000649	DKC1	86	81.839	Heterocephalus_glaber_female
ENSLACG00000014025	DKC1	91	87.940	ENSHGLG00100001153	DKC1	87	81.839	Heterocephalus_glaber_male
ENSLACG00000014025	DKC1	90	87.089	ENSHCOG00000021099	dkc1	95	76.278	Hippocampus_comes
ENSLACG00000014025	DKC1	91	87.688	ENSIPUG00000010309	dkc1	96	78.629	Ictalurus_punctatus
ENSLACG00000014025	DKC1	91	76.633	ENSSTOG00000011904	-	83	71.397	Ictidomys_tridecemlineatus
ENSLACG00000014025	DKC1	91	80.402	ENSSTOG00000020149	-	87	75.395	Ictidomys_tridecemlineatus
ENSLACG00000014025	DKC1	91	88.693	ENSSTOG00000001074	-	92	82.000	Ictidomys_tridecemlineatus
ENSLACG00000014025	DKC1	63	75.451	ENSJJAG00000010086	-	92	75.451	Jaculus_jaculus
ENSLACG00000014025	DKC1	90	84.596	ENSKMAG00000008010	dkc1	90	78.271	Kryptolebias_marmoratus
ENSLACG00000014025	DKC1	90	87.310	ENSLBEG00000019122	dkc1	92	81.375	Labrus_bergylta
ENSLACG00000014025	DKC1	90	89.141	ENSLOCG00000013713	dkc1	96	82.366	Lepisosteus_oculatus
ENSLACG00000014025	DKC1	91	88.191	ENSLAFG00000000221	DKC1	87	81.778	Loxodonta_africana
ENSLACG00000014025	DKC1	91	88.191	ENSMFAG00000032398	DKC1	75	81.960	Macaca_fascicularis
ENSLACG00000014025	DKC1	91	88.191	ENSMMUG00000005768	DKC1	87	81.737	Macaca_mulatta
ENSLACG00000014025	DKC1	91	88.191	ENSMNEG00000034503	DKC1	87	81.737	Macaca_nemestrina
ENSLACG00000014025	DKC1	91	88.191	ENSMLEG00000034422	DKC1	87	81.737	Mandrillus_leucophaeus
ENSLACG00000014025	DKC1	92	87.345	ENSMAMG00000005427	dkc1	91	87.160	Mastacembelus_armatus
ENSLACG00000014025	DKC1	91	85.714	ENSMZEG00005014503	dkc1	91	79.521	Maylandia_zebra
ENSLACG00000014025	DKC1	82	90.055	ENSMGAG00000009238	DKC1	94	82.949	Meleagris_gallopavo
ENSLACG00000014025	DKC1	64	74.194	ENSMAUG00000016454	-	92	74.194	Mesocricetus_auratus
ENSLACG00000014025	DKC1	83	79.945	ENSMICG00000002818	-	99	77.473	Microcebus_murinus
ENSLACG00000014025	DKC1	91	87.940	ENSMICG00000038751	-	83	85.511	Microcebus_murinus
ENSLACG00000014025	DKC1	64	71.326	ENSMOCG00000001169	-	92	71.326	Microtus_ochrogaster
ENSLACG00000014025	DKC1	95	85.542	ENSMMOG00000020348	dkc1	90	85.542	Mola_mola
ENSLACG00000014025	DKC1	91	88.191	ENSMODG00000009243	DKC1	75	83.524	Monodelphis_domestica
ENSLACG00000014025	DKC1	96	84.798	ENSMALG00000009454	dkc1	88	81.333	Monopterus_albus
ENSLACG00000014025	DKC1	90	77.419	MGP_CAROLIEiJ_G0033191	Dkc1	85	88.800	Mus_caroli
ENSLACG00000014025	DKC1	91	88.442	ENSMUSG00000031403	Dkc1	87	82.393	Mus_musculus
ENSLACG00000014025	DKC1	91	87.940	MGP_PahariEiJ_G0031735	Dkc1	85	82.569	Mus_pahari
ENSLACG00000014025	DKC1	91	88.442	MGP_SPRETEiJ_G0034351	Dkc1	94	76.955	Mus_spretus
ENSLACG00000014025	DKC1	91	88.693	ENSMPUG00000016136	DKC1	91	77.778	Mustela_putorius_furo
ENSLACG00000014025	DKC1	91	84.925	ENSMLUG00000011918	DKC1	76	84.962	Myotis_lucifugus
ENSLACG00000014025	DKC1	64	74.552	ENSNGAG00000015724	-	92	74.552	Nannospalax_galili
ENSLACG00000014025	DKC1	90	86.869	ENSNBRG00000005638	dkc1	82	85.222	Neolamprologus_brichardi
ENSLACG00000014025	DKC1	91	88.693	ENSNLEG00000014323	DKC1	87	81.960	Nomascus_leucogenys
ENSLACG00000014025	DKC1	91	84.422	ENSMEUG00000001066	DKC1	89	83.251	Notamacropus_eugenii
ENSLACG00000014025	DKC1	80	81.429	ENSOPRG00000005248	DKC1	70	81.429	Ochotona_princeps
ENSLACG00000014025	DKC1	64	74.910	ENSODEG00000000549	-	92	74.910	Octodon_degus
ENSLACG00000014025	DKC1	91	88.945	ENSODEG00000011816	-	86	83.184	Octodon_degus
ENSLACG00000014025	DKC1	90	87.374	ENSONIG00000013889	dkc1	85	83.333	Oreochromis_niloticus
ENSLACG00000014025	DKC1	88	90.698	ENSOANG00000008713	-	96	82.942	Ornithorhynchus_anatinus
ENSLACG00000014025	DKC1	66	60.112	ENSOANG00000022295	-	95	60.411	Ornithorhynchus_anatinus
ENSLACG00000014025	DKC1	91	88.442	ENSOCUG00000012646	DKC1	92	80.213	Oryctolagus_cuniculus
ENSLACG00000014025	DKC1	89	86.701	ENSORLG00000018748	dkc1	82	83.493	Oryzias_latipes
ENSLACG00000014025	DKC1	90	85.859	ENSOMEG00000005786	dkc1	89	83.012	Oryzias_melastigma
ENSLACG00000014025	DKC1	91	88.442	ENSOGAG00000003399	DKC1	88	80.174	Otolemur_garnettii
ENSLACG00000014025	DKC1	91	88.945	ENSOARG00000003047	DKC1	88	81.960	Ovis_aries
ENSLACG00000014025	DKC1	91	88.693	ENSPPAG00000023820	DKC1	87	82.183	Pan_paniscus
ENSLACG00000014025	DKC1	91	88.945	ENSPPRG00000009104	DKC1	83	85.782	Panthera_pardus
ENSLACG00000014025	DKC1	91	88.945	ENSPTIG00000017469	DKC1	83	86.893	Panthera_tigris_altaica
ENSLACG00000014025	DKC1	91	88.693	ENSPTRG00000022449	DKC1	87	81.960	Pan_troglodytes
ENSLACG00000014025	DKC1	91	88.693	ENSPTRG00000043416	-	76	81.960	Pan_troglodytes
ENSLACG00000014025	DKC1	91	88.191	ENSPANG00000011978	DKC1	87	81.737	Papio_anubis
ENSLACG00000014025	DKC1	90	88.804	ENSPKIG00000008443	dkc1	84	88.608	Paramormyrops_kingsleyae
ENSLACG00000014025	DKC1	81	91.597	ENSPSIG00000013765	DKC1	86	91.597	Pelodiscus_sinensis
ENSLACG00000014025	DKC1	90	83.838	ENSPMGG00000004097	dkc1	76	82.410	Periophthalmus_magnuspinnatus
ENSLACG00000014025	DKC1	72	87.931	ENSPEMG00000013348	Dkc1	84	87.931	Peromyscus_maniculatus_bairdii
ENSLACG00000014025	DKC1	91	88.191	ENSPCIG00000016706	DKC1	76	82.340	Phascolarctos_cinereus
ENSLACG00000014025	DKC1	90	86.364	ENSPFOG00000018653	dkc1	86	81.336	Poecilia_formosa
ENSLACG00000014025	DKC1	90	86.364	ENSPLAG00000003272	dkc1	78	81.336	Poecilia_latipinna
ENSLACG00000014025	DKC1	90	86.364	ENSPMEG00000010413	dkc1	86	81.336	Poecilia_mexicana
ENSLACG00000014025	DKC1	90	86.111	ENSPREG00000004100	dkc1	85	80.876	Poecilia_reticulata
ENSLACG00000014025	DKC1	91	88.693	ENSPPYG00000020892	DKC1	88	81.960	Pongo_abelii
ENSLACG00000014025	DKC1	82	88.398	ENSPCAG00000015034	DKC1	71	88.398	Procavia_capensis
ENSLACG00000014025	DKC1	91	88.191	ENSPCOG00000026874	DKC1	87	81.514	Propithecus_coquereli
ENSLACG00000014025	DKC1	91	89.196	ENSPVAG00000009222	DKC1	87	83.562	Pteropus_vampyrus
ENSLACG00000014025	DKC1	90	86.364	ENSPNYG00000020063	dkc1	89	79.018	Pundamilia_nyererei
ENSLACG00000014025	DKC1	91	87.437	ENSPNAG00000005780	dkc1	87	81.538	Pygocentrus_nattereri
ENSLACG00000014025	DKC1	91	85.965	ENSRNOG00000055562	Dkc1	92	76.667	Rattus_norvegicus
ENSLACG00000014025	DKC1	91	88.191	ENSRBIG00000028457	DKC1	75	81.737	Rhinopithecus_bieti
ENSLACG00000014025	DKC1	91	88.191	ENSRROG00000044780	DKC1	87	81.737	Rhinopithecus_roxellana
ENSLACG00000014025	DKC1	87	70.235	YLR175W	-	87	65.796	Saccharomyces_cerevisiae
ENSLACG00000014025	DKC1	91	88.693	ENSSBOG00000033746	DKC1	87	81.960	Saimiri_boliviensis_boliviensis
ENSLACG00000014025	DKC1	91	89.196	ENSSHAG00000002463	DKC1	92	84.404	Sarcophilus_harrisii
ENSLACG00000014025	DKC1	94	87.621	ENSSFOG00015009585	dkc1	90	81.562	Scleropages_formosus
ENSLACG00000014025	DKC1	91	87.186	ENSSMAG00000002552	dkc1	89	79.521	Scophthalmus_maximus
ENSLACG00000014025	DKC1	90	88.550	ENSSDUG00000009963	dkc1	89	81.637	Seriola_dumerili
ENSLACG00000014025	DKC1	90	88.550	ENSSLDG00000019342	dkc1	92	82.955	Seriola_lalandi_dorsalis
ENSLACG00000014025	DKC1	90	84.343	ENSSARG00000001822	DKC1	88	77.852	Sorex_araneus
ENSLACG00000014025	DKC1	91	89.950	ENSSPUG00000018907	DKC1	90	81.356	Sphenodon_punctatus
ENSLACG00000014025	DKC1	90	88.354	ENSSPAG00000002585	dkc1	83	82.380	Stegastes_partitus
ENSLACG00000014025	DKC1	91	87.940	ENSSSCG00000012823	DKC1	86	85.337	Sus_scrofa
ENSLACG00000014025	DKC1	82	90.884	ENSTGUG00000006781	DKC1	89	84.500	Taeniopygia_guttata
ENSLACG00000014025	DKC1	90	87.817	ENSTRUG00000004413	dkc1	86	83.023	Takifugu_rubripes
ENSLACG00000014025	DKC1	90	70.500	ENSTNIG00000002582	dkc1	86	66.290	Tetraodon_nigroviridis
ENSLACG00000014025	DKC1	61	87.361	ENSTBEG00000011262	DKC1	85	80.130	Tupaia_belangeri
ENSLACG00000014025	DKC1	63	89.170	ENSTTRG00000008089	DKC1	55	89.170	Tursiops_truncatus
ENSLACG00000014025	DKC1	91	88.693	ENSUAMG00000022721	DKC1	85	88.148	Ursus_americanus
ENSLACG00000014025	DKC1	91	88.191	ENSUMAG00000016899	DKC1	92	89.153	Ursus_maritimus
ENSLACG00000014025	DKC1	91	86.914	ENSVVUG00000020734	-	70	86.914	Vulpes_vulpes
ENSLACG00000014025	DKC1	90	74.559	ENSVVUG00000021671	-	80	70.602	Vulpes_vulpes
ENSLACG00000014025	DKC1	92	88.337	ENSXETG00000032517	DKC1	89	83.407	Xenopus_tropicalis
ENSLACG00000014025	DKC1	91	85.965	ENSXCOG00000005498	dkc1	93	79.773	Xiphophorus_couchianus
ENSLACG00000014025	DKC1	90	86.111	ENSXMAG00000004919	dkc1	83	84.541	Xiphophorus_maculatus