EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014030 (Gene tree)
Gene ID: 102352049
Gene Symbol: LRPPRC
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 162250 bases
Position: chrJH127095.1:949508-1111757
Accession: 102352049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015933	PPR	PF01535.20	8.4e-30	1	4
ENSLACP00000015933	PPR	PF01535.20	8.4e-30	2	4
ENSLACP00000015933	PPR	PF01535.20	8.4e-30	3	4
ENSLACP00000015933	PPR	PF01535.20	8.4e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016043	LRPPRC-201	4990	XM_005999561	ENSLACP00000015933	1431 (aa)	XP_005999623	H3B212

Gene Model

Click here to download ENSLACG00000014030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014030	LRPPRC	100	57.212	ENSAPOG00000016610	lrpprc	100	57.212	Acanthochromis_polyacanthus
ENSLACG00000014030	LRPPRC	96	61.183	ENSAMEG00000005852	LRPPRC	100	61.700	Ailuropoda_melanoleuca
ENSLACG00000014030	LRPPRC	99	54.888	ENSACIG00000009604	lrpprc	99	54.888	Amphilophus_citrinellus
ENSLACG00000014030	LRPPRC	100	57.478	ENSAOCG00000005886	lrpprc	100	57.478	Amphiprion_ocellaris
ENSLACG00000014030	LRPPRC	100	55.082	ENSAPEG00000002937	lrpprc	98	55.288	Amphiprion_percula
ENSLACG00000014030	LRPPRC	93	59.608	ENSATEG00000010555	lrpprc	95	61.194	Anabas_testudineus
ENSLACG00000014030	LRPPRC	99	64.446	ENSACAG00000029278	LRPPRC	99	64.446	Anolis_carolinensis
ENSLACG00000014030	LRPPRC	99	61.115	ENSANAG00000027440	LRPPRC	100	61.185	Aotus_nancymaae
ENSLACG00000014030	LRPPRC	95	57.383	ENSACLG00000023712	lrpprc	98	57.383	Astatotilapia_calliptera
ENSLACG00000014030	LRPPRC	99	60.568	ENSCJAG00000000794	LRPPRC	100	60.933	Callithrix_jacchus
ENSLACG00000014030	LRPPRC	98	61.330	ENSCHIG00000020173	LRPPRC	99	60.809	Capra_hircus
ENSLACG00000014030	LRPPRC	95	47.067	ENSCAPG00000013631	LRPPRC	99	47.067	Cavia_aperea
ENSLACG00000014030	LRPPRC	86	60.682	ENSCPOG00000000204	LRPPRC	100	60.682	Cavia_porcellus
ENSLACG00000014030	LRPPRC	99	60.864	ENSCCAG00000031900	LRPPRC	100	60.864	Cebus_capucinus
ENSLACG00000014030	LRPPRC	97	61.023	ENSCATG00000014187	LRPPRC	99	58.545	Cercocebus_atys
ENSLACG00000014030	LRPPRC	99	58.746	ENSCLAG00000005203	LRPPRC	99	58.746	Chinchilla_lanigera
ENSLACG00000014030	LRPPRC	97	61.511	ENSCSAG00000013233	LRPPRC	100	60.697	Chlorocebus_sabaeus
ENSLACG00000014030	LRPPRC	84	60.667	ENSCHOG00000003631	LRPPRC	84	60.667	Choloepus_hoffmanni
ENSLACG00000014030	LRPPRC	96	59.606	ENSCANG00000034961	LRPPRC	99	63.768	Colobus_angolensis_palliatus
ENSLACG00000014030	LRPPRC	99	58.502	ENSCGRG00001016261	Lrpprc	100	58.688	Cricetulus_griseus_chok1gshd
ENSLACG00000014030	LRPPRC	99	58.502	ENSCGRG00000004072	Lrpprc	100	58.688	Cricetulus_griseus_crigri
ENSLACG00000014030	LRPPRC	99	44.749	ENSCSEG00000003850	lrpprc	96	50.781	Cynoglossus_semilaevis
ENSLACG00000014030	LRPPRC	100	58.836	ENSCVAG00000012967	lrpprc	100	58.836	Cyprinodon_variegatus
ENSLACG00000014030	LRPPRC	99	55.187	ENSDARG00000043970	lrpprc	98	55.187	Danio_rerio
ENSLACG00000014030	LRPPRC	78	46.368	ENSDNOG00000032336	-	95	46.368	Dasypus_novemcinctus
ENSLACG00000014030	LRPPRC	99	59.958	ENSDNOG00000012594	-	99	59.958	Dasypus_novemcinctus
ENSLACG00000014030	LRPPRC	99	60.572	ENSDORG00000012233	Lrpprc	100	60.836	Dipodomys_ordii
ENSLACG00000014030	LRPPRC	99	59.053	ENSETEG00000006657	LRPPRC	99	59.384	Echinops_telfairi
ENSLACG00000014030	LRPPRC	86	50.602	ENSEEUG00000012340	LRPPRC	93	50.602	Erinaceus_europaeus
ENSLACG00000014030	LRPPRC	95	57.675	ENSELUG00000012803	lrpprc	99	57.675	Esox_lucius
ENSLACG00000014030	LRPPRC	99	61.399	ENSFCAG00000013468	LRPPRC	99	61.270	Felis_catus
ENSLACG00000014030	LRPPRC	95	57.551	ENSFALG00000012738	LRPPRC	99	57.551	Ficedula_albicollis
ENSLACG00000014030	LRPPRC	99	57.650	ENSFDAG00000015328	LRPPRC	100	57.650	Fukomys_damarensis
ENSLACG00000014030	LRPPRC	100	56.582	ENSFHEG00000019604	lrpprc	100	56.582	Fundulus_heteroclitus
ENSLACG00000014030	LRPPRC	99	54.514	ENSGMOG00000008337	lrpprc	99	54.514	Gadus_morhua
ENSLACG00000014030	LRPPRC	99	58.281	ENSGAFG00000001455	lrpprc	99	58.281	Gambusia_affinis
ENSLACG00000014030	LRPPRC	99	57.173	ENSGACG00000010679	lrpprc	99	58.780	Gasterosteus_aculeatus
ENSLACG00000014030	LRPPRC	99	59.777	ENSHBUG00000000393	lrpprc	97	59.777	Haplochromis_burtoni
ENSLACG00000014030	LRPPRC	99	59.290	ENSHGLG00000006123	LRPPRC	100	59.290	Heterocephalus_glaber_female
ENSLACG00000014030	LRPPRC	60	61.385	ENSHGLG00100005960	-	100	61.385	Heterocephalus_glaber_male
ENSLACG00000014030	LRPPRC	99	56.553	ENSHCOG00000002107	lrpprc	100	56.553	Hippocampus_comes
ENSLACG00000014030	LRPPRC	100	59.569	ENSIPUG00000009406	lrpprc	98	59.777	Ictalurus_punctatus
ENSLACG00000014030	LRPPRC	99	60.809	ENSSTOG00000011185	LRPPRC	100	60.809	Ictidomys_tridecemlineatus
ENSLACG00000014030	LRPPRC	96	61.808	ENSJJAG00000020475	Lrpprc	100	60.433	Jaculus_jaculus
ENSLACG00000014030	LRPPRC	99	51.911	ENSKMAG00000003287	lrpprc	85	51.911	Kryptolebias_marmoratus
ENSLACG00000014030	LRPPRC	99	52.533	ENSLBEG00000023225	lrpprc	95	61.024	Labrus_bergylta
ENSLACG00000014030	LRPPRC	99	67.626	ENSLOCG00000016390	lrpprc	97	67.626	Lepisosteus_oculatus
ENSLACG00000014030	LRPPRC	99	56.924	ENSLAFG00000008614	LRPPRC	99	56.885	Loxodonta_africana
ENSLACG00000014030	LRPPRC	97	61.223	ENSMFAG00000041560	LRPPRC	99	63.768	Macaca_fascicularis
ENSLACG00000014030	LRPPRC	97	60.604	ENSMMUG00000019841	LRPPRC	99	62.575	Macaca_mulatta
ENSLACG00000014030	LRPPRC	97	61.295	ENSMNEG00000031613	LRPPRC	100	60.543	Macaca_nemestrina
ENSLACG00000014030	LRPPRC	98	53.928	ENSMAMG00000021835	lrpprc	98	54.175	Mastacembelus_armatus
ENSLACG00000014030	LRPPRC	99	59.569	ENSMZEG00005027379	lrpprc	99	59.569	Maylandia_zebra
ENSLACG00000014030	LRPPRC	99	59.202	ENSMAUG00000012118	Lrpprc	100	59.386	Mesocricetus_auratus
ENSLACG00000014030	LRPPRC	99	61.469	ENSMICG00000010486	LRPPRC	99	61.469	Microcebus_murinus
ENSLACG00000014030	LRPPRC	99	61.162	ENSMOCG00000006048	Lrpprc	100	61.162	Microtus_ochrogaster
ENSLACG00000014030	LRPPRC	100	55.256	ENSMMOG00000007830	lrpprc	99	59.266	Mola_mola
ENSLACG00000014030	LRPPRC	95	61.099	ENSMODG00000000648	LRPPRC	99	61.099	Monodelphis_domestica
ENSLACG00000014030	LRPPRC	99	55.647	ENSMALG00000001271	lrpprc	99	55.992	Monopterus_albus
ENSLACG00000014030	LRPPRC	98	62.673	ENSMPUG00000011800	LRPPRC	99	62.744	Mustela_putorius_furo
ENSLACG00000014030	LRPPRC	99	61.166	ENSMLUG00000010575	LRPPRC	99	61.103	Myotis_lucifugus
ENSLACG00000014030	LRPPRC	99	60.070	ENSNGAG00000013069	Lrpprc	100	60.000	Nannospalax_galili
ENSLACG00000014030	LRPPRC	94	55.249	ENSNBRG00000013202	lrpprc	92	63.907	Neolamprologus_brichardi
ENSLACG00000014030	LRPPRC	99	60.014	ENSNLEG00000016782	LRPPRC	100	60.014	Nomascus_leucogenys
ENSLACG00000014030	LRPPRC	88	57.576	ENSOPRG00000016774	LRPPRC	90	56.061	Ochotona_princeps
ENSLACG00000014030	LRPPRC	99	60.309	ENSODEG00000011211	LRPPRC	99	60.504	Octodon_degus
ENSLACG00000014030	LRPPRC	99	58.947	ENSONIG00000000917	lrpprc	99	58.947	Oreochromis_niloticus
ENSLACG00000014030	LRPPRC	74	58.280	ENSOANG00000014670	-	99	58.280	Ornithorhynchus_anatinus
ENSLACG00000014030	LRPPRC	99	60.867	ENSOCUG00000015046	LRPPRC	95	61.076	Oryctolagus_cuniculus
ENSLACG00000014030	LRPPRC	100	54.879	ENSORLG00000004605	lrpprc	99	54.459	Oryzias_latipes
ENSLACG00000014030	LRPPRC	92	58.283	ENSORLG00020012536	lrpprc	99	57.671	Oryzias_latipes_hni
ENSLACG00000014030	LRPPRC	100	54.571	ENSORLG00015018270	lrpprc	99	59.574	Oryzias_latipes_hsok
ENSLACG00000014030	LRPPRC	99	59.205	ENSOGAG00000012798	LRPPRC	100	59.554	Otolemur_garnettii
ENSLACG00000014030	LRPPRC	95	62.463	ENSOARG00000006522	LRPPRC	99	61.003	Ovis_aries
ENSLACG00000014030	LRPPRC	99	59.722	ENSPPAG00000040876	LRPPRC	100	59.722	Pan_paniscus
ENSLACG00000014030	LRPPRC	99	61.329	ENSPPRG00000006578	LRPPRC	99	61.200	Panthera_pardus
ENSLACG00000014030	LRPPRC	97	62.193	ENSPTIG00000000933	LRPPRC	97	62.193	Panthera_tigris_altaica
ENSLACG00000014030	LRPPRC	99	60.280	ENSPTRG00000011880	LRPPRC	100	60.348	Pan_troglodytes
ENSLACG00000014030	LRPPRC	97	60.663	ENSPANG00000020731	LRPPRC	99	58.182	Papio_anubis
ENSLACG00000014030	LRPPRC	89	60.538	ENSPKIG00000022232	lrpprc	97	60.538	Paramormyrops_kingsleyae
ENSLACG00000014030	LRPPRC	62	67.460	ENSPSIG00000006830	-	99	67.460	Pelodiscus_sinensis
ENSLACG00000014030	LRPPRC	66	51.739	ENSPMGG00000016597	lrpprc	96	51.739	Periophthalmus_magnuspinnatus
ENSLACG00000014030	LRPPRC	93	49.401	ENSPMAG00000002147	lrpprc	99	49.401	Petromyzon_marinus
ENSLACG00000014030	LRPPRC	99	57.751	ENSPFOG00000011227	lrpprc	99	58.146	Poecilia_formosa
ENSLACG00000014030	LRPPRC	99	57.472	ENSPLAG00000004018	lrpprc	99	57.472	Poecilia_latipinna
ENSLACG00000014030	LRPPRC	99	57.612	ENSPMEG00000016425	lrpprc	99	57.612	Poecilia_mexicana
ENSLACG00000014030	LRPPRC	99	57.153	ENSPREG00000003662	lrpprc	99	57.153	Poecilia_reticulata
ENSLACG00000014030	LRPPRC	57	60.610	ENSPPYG00000029532	-	100	60.610	Pongo_abelii
ENSLACG00000014030	LRPPRC	82	55.630	ENSPCAG00000001430	LRPPRC	84	55.518	Procavia_capensis
ENSLACG00000014030	LRPPRC	99	58.130	ENSPVAG00000002007	LRPPRC	99	58.130	Pteropus_vampyrus
ENSLACG00000014030	LRPPRC	99	54.990	ENSPNYG00000000756	lrpprc	99	54.990	Pundamilia_nyererei
ENSLACG00000014030	LRPPRC	99	61.232	ENSPNAG00000002895	lrpprc	99	61.232	Pygocentrus_nattereri
ENSLACG00000014030	LRPPRC	99	59.819	ENSRNOG00000005877	Lrpprc	100	59.889	Rattus_norvegicus
ENSLACG00000014030	LRPPRC	97	60.848	ENSRBIG00000031552	LRPPRC	100	59.986	Rhinopithecus_bieti
ENSLACG00000014030	LRPPRC	99	60.208	ENSSBOG00000011807	LRPPRC	100	60.237	Saimiri_boliviensis_boliviensis
ENSLACG00000014030	LRPPRC	94	60.400	ENSSHAG00000018725	LRPPRC	99	60.400	Sarcophilus_harrisii
ENSLACG00000014030	LRPPRC	99	55.278	ENSSFOG00015001042	lrpprc	99	55.278	Scleropages_formosus
ENSLACG00000014030	LRPPRC	100	58.073	ENSSDUG00000019062	lrpprc	99	58.073	Seriola_dumerili
ENSLACG00000014030	LRPPRC	100	47.157	ENSSLDG00000023028	lrpprc	100	47.536	Seriola_lalandi_dorsalis
ENSLACG00000014030	LRPPRC	91	56.656	ENSSARG00000000426	LRPPRC	99	56.737	Sorex_araneus
ENSLACG00000014030	LRPPRC	100	53.086	ENSSPAG00000000162	lrpprc	100	53.187	Stegastes_partitus
ENSLACG00000014030	LRPPRC	99	60.363	ENSSSCG00000008452	LRPPRC	99	60.363	Sus_scrofa
ENSLACG00000014030	LRPPRC	93	56.292	ENSTGUG00000003759	LRPPRC	100	56.292	Taeniopygia_guttata
ENSLACG00000014030	LRPPRC	99	58.062	ENSTRUG00000008409	lrpprc	96	58.062	Takifugu_rubripes
ENSLACG00000014030	LRPPRC	99	57.083	ENSTNIG00000007470	lrpprc	99	58.065	Tetraodon_nigroviridis
ENSLACG00000014030	LRPPRC	99	58.565	ENSTTRG00000006403	LRPPRC	99	58.799	Tursiops_truncatus
ENSLACG00000014030	LRPPRC	95	59.297	ENSVPAG00000008993	LRPPRC	99	59.297	Vicugna_pacos
ENSLACG00000014030	LRPPRC	99	66.807	ENSXETG00000009296	lrpprc	99	66.737	Xenopus_tropicalis
ENSLACG00000014030	LRPPRC	99	53.099	ENSXCOG00000013343	lrpprc	95	55.447	Xiphophorus_couchianus
ENSLACG00000014030	LRPPRC	99	57.232	ENSXMAG00000018108	lrpprc	99	57.232	Xiphophorus_maculatus