EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000014056 (Gene tree)
Gene ID: 102352403
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 22184 bases
Position: chrJH126962.1:954961-977144
Accession: 102352403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000015964	RRM_1	PF00076.22	2.4e-13	1	1
ENSLACP00000015964	RRM_3	PF08777.11	4e-27	1	1
ENSLACP00000015964	La	PF05383.17	6.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000016074	SSB-201	5456	XM_005997632	ENSLACP00000015964	409 (aa)	XP_005997694	H3B243

Gene Model

Click here to download ENSLACG00000014056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000014056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000014056	SSB	99	69.363	ENSG00000138385	SSB	100	75.000	Homo_sapiens
ENSLACG00000014056	SSB	99	54.034	ENSAPOG00000003448	ssb	100	54.034	Acanthochromis_polyacanthus
ENSLACG00000014056	SSB	99	66.351	ENSAMEG00000010507	SSB	99	63.744	Ailuropoda_melanoleuca
ENSLACG00000014056	SSB	89	57.104	ENSACIG00000001738	ssb	94	57.222	Amphilophus_citrinellus
ENSLACG00000014056	SSB	99	54.279	ENSAOCG00000020398	ssb	100	53.790	Amphiprion_ocellaris
ENSLACG00000014056	SSB	99	54.523	ENSAPEG00000020395	ssb	100	54.768	Amphiprion_percula
ENSLACG00000014056	SSB	99	55.501	ENSATEG00000016884	ssb	100	55.012	Anabas_testudineus
ENSLACG00000014056	SSB	99	67.453	ENSAPLG00000006109	SSB	99	67.453	Anas_platyrhynchos
ENSLACG00000014056	SSB	99	60.147	ENSACAG00000017008	SSB	99	59.902	Anolis_carolinensis
ENSLACG00000014056	SSB	99	59.951	ENSANAG00000027195	-	99	60.688	Aotus_nancymaae
ENSLACG00000014056	SSB	98	53.367	ENSACLG00000010798	ssb	99	53.865	Astatotilapia_calliptera
ENSLACG00000014056	SSB	97	55.941	ENSAMXG00000012606	ssb	99	56.188	Astyanax_mexicanus
ENSLACG00000014056	SSB	99	69.682	ENSBTAG00000008716	SSB	99	66.339	Bos_taurus
ENSLACG00000014056	SSB	73	36.513	WBGene00016653	C44E4.4	76	37.171	Caenorhabditis_elegans
ENSLACG00000014056	SSB	99	69.608	ENSCJAG00000045073	SSB	99	66.830	Callithrix_jacchus
ENSLACG00000014056	SSB	99	69.193	ENSCAFG00000012418	SSB	99	66.912	Canis_familiaris
ENSLACG00000014056	SSB	99	69.193	ENSCAFG00020002900	SSB	99	66.912	Canis_lupus_dingo
ENSLACG00000014056	SSB	99	64.461	ENSCHIG00000022196	-	99	63.145	Capra_hircus
ENSLACG00000014056	SSB	99	69.682	ENSCHIG00000022624	-	99	66.339	Capra_hircus
ENSLACG00000014056	SSB	99	68.949	ENSTSYG00000000097	SSB	99	66.093	Carlito_syrichta
ENSLACG00000014056	SSB	99	70.098	ENSCPOG00000003338	SSB	99	67.813	Cavia_porcellus
ENSLACG00000014056	SSB	99	69.608	ENSCCAG00000035147	SSB	99	67.322	Cebus_capucinus
ENSLACG00000014056	SSB	80	62.763	ENSCATG00000036701	SSB	95	58.333	Cercocebus_atys
ENSLACG00000014056	SSB	99	51.961	ENSCATG00000042909	-	99	49.386	Cercocebus_atys
ENSLACG00000014056	SSB	99	69.608	ENSCLAG00000015617	-	99	66.339	Chinchilla_lanigera
ENSLACG00000014056	SSB	99	69.853	ENSCSAG00000015200	SSB	89	67.076	Chlorocebus_sabaeus
ENSLACG00000014056	SSB	98	63.342	ENSCSAG00000018390	-	100	60.250	Chlorocebus_sabaeus
ENSLACG00000014056	SSB	99	68.873	ENSCHOG00000007763	SSB	99	65.848	Choloepus_hoffmanni
ENSLACG00000014056	SSB	99	69.363	ENSCPBG00000006519	SSB	99	69.118	Chrysemys_picta_bellii
ENSLACG00000014056	SSB	99	69.853	ENSCANG00000027695	SSB	99	67.076	Colobus_angolensis_palliatus
ENSLACG00000014056	SSB	99	60.539	ENSCANG00000033240	-	99	57.740	Colobus_angolensis_palliatus
ENSLACG00000014056	SSB	95	55.499	ENSCANG00000028838	-	92	53.077	Colobus_angolensis_palliatus
ENSLACG00000014056	SSB	99	60.680	ENSCGRG00001024831	Ssb	99	62.379	Cricetulus_griseus_chok1gshd
ENSLACG00000014056	SSB	99	60.680	ENSCGRG00000005387	Ssb	99	62.379	Cricetulus_griseus_crigri
ENSLACG00000014056	SSB	97	54.863	ENSCSEG00000011599	ssb	99	54.613	Cynoglossus_semilaevis
ENSLACG00000014056	SSB	99	54.390	ENSCVAG00000021558	ssb	100	53.902	Cyprinodon_variegatus
ENSLACG00000014056	SSB	97	57.855	ENSDARG00000029252	ssb	99	56.608	Danio_rerio
ENSLACG00000014056	SSB	99	69.363	ENSDNOG00000013450	SSB	99	66.339	Dasypus_novemcinctus
ENSLACG00000014056	SSB	99	62.077	ENSDORG00000005543	Ssb	99	62.077	Dipodomys_ordii
ENSLACG00000014056	SSB	83	34.561	FBgn0011638	La	67	37.868	Drosophila_melanogaster
ENSLACG00000014056	SSB	98	46.635	ENSEBUG00000001237	ssb	96	48.813	Eptatretus_burgeri
ENSLACG00000014056	SSB	99	69.118	ENSEASG00005022835	SSB	99	66.830	Equus_asinus_asinus
ENSLACG00000014056	SSB	99	69.363	ENSECAG00000018495	SSB	99	67.076	Equus_caballus
ENSLACG00000014056	SSB	75	56.209	ENSEEUG00000008077	SSB	78	56.209	Erinaceus_europaeus
ENSLACG00000014056	SSB	99	58.435	ENSELUG00000020929	ssb	100	57.946	Esox_lucius
ENSLACG00000014056	SSB	99	68.460	ENSFCAG00000011601	SSB	99	66.176	Felis_catus
ENSLACG00000014056	SSB	99	67.813	ENSFALG00000000930	SSB	99	69.287	Ficedula_albicollis
ENSLACG00000014056	SSB	99	69.118	ENSFDAG00000000598	SSB	99	66.830	Fukomys_damarensis
ENSLACG00000014056	SSB	72	47.619	ENSFHEG00000003268	ssb	92	52.525	Fundulus_heteroclitus
ENSLACG00000014056	SSB	97	51.597	ENSGMOG00000002664	ssb	100	51.597	Gadus_morhua
ENSLACG00000014056	SSB	99	70.443	ENSGALG00000009677	SSB	99	69.024	Gallus_gallus
ENSLACG00000014056	SSB	99	54.523	ENSGAFG00000002749	ssb	100	54.523	Gambusia_affinis
ENSLACG00000014056	SSB	98	55.012	ENSGACG00000005107	ssb	99	54.523	Gasterosteus_aculeatus
ENSLACG00000014056	SSB	99	69.363	ENSGAGG00000007807	SSB	99	69.118	Gopherus_agassizii
ENSLACG00000014056	SSB	55	65.333	ENSGGOG00000023471	-	91	61.161	Gorilla_gorilla
ENSLACG00000014056	SSB	99	58.680	ENSGGOG00000024891	-	100	55.882	Gorilla_gorilla
ENSLACG00000014056	SSB	98	53.367	ENSHBUG00000006584	ssb	99	53.616	Haplochromis_burtoni
ENSLACG00000014056	SSB	99	63.081	ENSHGLG00000004478	-	99	62.103	Heterocephalus_glaber_female
ENSLACG00000014056	SSB	99	62.500	ENSHGLG00000005832	-	99	59.951	Heterocephalus_glaber_female
ENSLACG00000014056	SSB	99	68.599	ENSHGLG00000017580	-	99	68.116	Heterocephalus_glaber_female
ENSLACG00000014056	SSB	99	61.520	ENSHGLG00100008767	-	99	59.459	Heterocephalus_glaber_male
ENSLACG00000014056	SSB	99	68.599	ENSHGLG00100003084	-	99	68.116	Heterocephalus_glaber_male
ENSLACG00000014056	SSB	98	53.580	ENSHCOG00000019011	ssb	100	53.333	Hippocampus_comes
ENSLACG00000014056	SSB	97	58.065	ENSIPUG00000003681	SSB	99	58.065	Ictalurus_punctatus
ENSLACG00000014056	SSB	99	69.779	ENSSTOG00000008416	SSB	99	69.287	Ictidomys_tridecemlineatus
ENSLACG00000014056	SSB	99	61.176	ENSJJAG00000023158	-	99	60.941	Jaculus_jaculus
ENSLACG00000014056	SSB	99	51.478	ENSJJAG00000016250	-	99	48.889	Jaculus_jaculus
ENSLACG00000014056	SSB	98	54.703	ENSKMAG00000017317	ssb	99	54.455	Kryptolebias_marmoratus
ENSLACG00000014056	SSB	99	53.790	ENSLBEG00000017345	ssb	100	53.790	Labrus_bergylta
ENSLACG00000014056	SSB	97	66.085	ENSLOCG00000007933	ssb	98	66.334	Lepisosteus_oculatus
ENSLACG00000014056	SSB	99	59.069	ENSLAFG00000028909	-	99	57.248	Loxodonta_africana
ENSLACG00000014056	SSB	74	53.974	ENSLAFG00000026721	-	99	53.795	Loxodonta_africana
ENSLACG00000014056	SSB	99	66.194	ENSLAFG00000000867	-	99	63.915	Loxodonta_africana
ENSLACG00000014056	SSB	87	62.570	ENSMFAG00000041478	-	93	62.388	Macaca_fascicularis
ENSLACG00000014056	SSB	99	69.853	ENSMFAG00000039066	SSB	99	67.076	Macaca_fascicularis
ENSLACG00000014056	SSB	99	48.030	ENSMMUG00000039889	-	99	46.914	Macaca_mulatta
ENSLACG00000014056	SSB	99	69.853	ENSMMUG00000023051	SSB	99	67.076	Macaca_mulatta
ENSLACG00000014056	SSB	99	60.049	ENSMMUG00000011724	-	97	58.477	Macaca_mulatta
ENSLACG00000014056	SSB	99	60.000	ENSMNEG00000028321	SSB	100	64.748	Macaca_nemestrina
ENSLACG00000014056	SSB	87	62.570	ENSMNEG00000034698	-	93	62.388	Macaca_nemestrina
ENSLACG00000014056	SSB	99	49.631	ENSMLEG00000042644	-	99	47.666	Mandrillus_leucophaeus
ENSLACG00000014056	SSB	99	69.853	ENSMLEG00000035717	SSB	99	67.076	Mandrillus_leucophaeus
ENSLACG00000014056	SSB	99	56.479	ENSMAMG00000004800	ssb	100	55.746	Mastacembelus_armatus
ENSLACG00000014056	SSB	98	53.367	ENSMZEG00005005749	ssb	99	53.865	Maylandia_zebra
ENSLACG00000014056	SSB	99	70.443	ENSMGAG00000010328	SSB	100	76.699	Meleagris_gallopavo
ENSLACG00000014056	SSB	98	62.843	ENSMICG00000033304	-	93	64.658	Microcebus_murinus
ENSLACG00000014056	SSB	100	69.512	ENSMICG00000028252	-	100	66.748	Microcebus_murinus
ENSLACG00000014056	SSB	99	57.843	ENSMODG00000019271	-	99	56.757	Monodelphis_domestica
ENSLACG00000014056	SSB	87	65.089	ENSMODG00000007027	-	99	65.089	Monodelphis_domestica
ENSLACG00000014056	SSB	99	65.228	ENSMODG00000008227	-	99	66.906	Monodelphis_domestica
ENSLACG00000014056	SSB	88	54.570	ENSMALG00000008045	ssb	78	59.692	Monopterus_albus
ENSLACG00000014056	SSB	99	60.757	MGP_CAROLIEiJ_G0023629	-	100	71.739	Mus_caroli
ENSLACG00000014056	SSB	99	60.047	ENSMUSG00000068882	Ssb	100	71.739	Mus_musculus
ENSLACG00000014056	SSB	99	60.190	MGP_PahariEiJ_G0025081	-	100	71.196	Mus_pahari
ENSLACG00000014056	SSB	99	60.047	MGP_SPRETEiJ_G0024551	Ssb	100	71.739	Mus_spretus
ENSLACG00000014056	SSB	99	69.118	ENSMPUG00000000785	SSB	99	66.830	Mustela_putorius_furo
ENSLACG00000014056	SSB	99	66.588	ENSMLUG00000016316	SSB	99	64.218	Myotis_lucifugus
ENSLACG00000014056	SSB	98	53.367	ENSNBRG00000012661	ssb	99	54.115	Neolamprologus_brichardi
ENSLACG00000014056	SSB	99	69.853	ENSNLEG00000004958	SSB	99	67.076	Nomascus_leucogenys
ENSLACG00000014056	SSB	99	51.225	ENSNLEG00000028754	-	99	50.369	Nomascus_leucogenys
ENSLACG00000014056	SSB	61	74.597	ENSMEUG00000001650	-	100	74.597	Notamacropus_eugenii
ENSLACG00000014056	SSB	71	49.658	ENSOPRG00000008475	-	99	51.701	Ochotona_princeps
ENSLACG00000014056	SSB	93	67.018	ENSODEG00000004202	-	99	67.018	Octodon_degus
ENSLACG00000014056	SSB	98	53.865	ENSONIG00000008776	ssb	99	54.115	Oreochromis_niloticus
ENSLACG00000014056	SSB	99	68.550	ENSOANG00000008543	SSB	99	68.550	Ornithorhynchus_anatinus
ENSLACG00000014056	SSB	99	67.647	ENSOCUG00000010396	SSB	99	66.746	Oryctolagus_cuniculus
ENSLACG00000014056	SSB	99	53.790	ENSORLG00000017208	ssb	100	53.545	Oryzias_latipes
ENSLACG00000014056	SSB	99	53.790	ENSORLG00020022574	ssb	100	53.790	Oryzias_latipes_hni
ENSLACG00000014056	SSB	99	54.034	ENSORLG00015016592	ssb	100	53.790	Oryzias_latipes_hsok
ENSLACG00000014056	SSB	99	54.902	ENSOMEG00000003193	ssb	100	54.657	Oryzias_melastigma
ENSLACG00000014056	SSB	99	67.217	ENSOGAG00000029768	SSB	99	66.745	Otolemur_garnettii
ENSLACG00000014056	SSB	99	69.682	ENSOARG00000002906	SSB	99	66.339	Ovis_aries
ENSLACG00000014056	SSB	99	69.363	ENSPPAG00000042673	SSB	99	67.076	Pan_paniscus
ENSLACG00000014056	SSB	88	56.267	ENSPPAG00000006189	-	93	54.144	Pan_paniscus
ENSLACG00000014056	SSB	99	57.702	ENSPPAG00000032427	-	100	67.442	Pan_paniscus
ENSLACG00000014056	SSB	99	68.460	ENSPPRG00000006599	SSB	99	66.176	Panthera_pardus
ENSLACG00000014056	SSB	99	68.460	ENSPTIG00000011021	SSB	97	66.176	Panthera_tigris_altaica
ENSLACG00000014056	SSB	99	69.363	ENSPTRG00000012620	SSB	99	67.076	Pan_troglodytes
ENSLACG00000014056	SSB	99	54.768	ENSPTRG00000042880	-	100	51.961	Pan_troglodytes
ENSLACG00000014056	SSB	99	49.877	ENSPANG00000034126	-	99	49.631	Papio_anubis
ENSLACG00000014056	SSB	99	69.853	ENSPANG00000007440	SSB	99	67.076	Papio_anubis
ENSLACG00000014056	SSB	98	49.380	ENSPANG00000031877	-	86	48.767	Papio_anubis
ENSLACG00000014056	SSB	99	61.275	ENSPKIG00000019325	ssb	99	61.520	Paramormyrops_kingsleyae
ENSLACG00000014056	SSB	99	67.402	ENSPSIG00000002265	SSB	93	67.157	Pelodiscus_sinensis
ENSLACG00000014056	SSB	86	51.130	ENSPMGG00000020075	ssb	90	51.884	Periophthalmus_magnuspinnatus
ENSLACG00000014056	SSB	98	47.086	ENSPMAG00000002982	ssb	100	47.086	Petromyzon_marinus
ENSLACG00000014056	SSB	99	68.627	ENSPCIG00000028591	-	99	67.476	Phascolarctos_cinereus
ENSLACG00000014056	SSB	99	55.257	ENSPFOG00000009650	ssb	100	55.257	Poecilia_formosa
ENSLACG00000014056	SSB	99	55.501	ENSPLAG00000020498	ssb	100	55.501	Poecilia_latipinna
ENSLACG00000014056	SSB	99	54.768	ENSPMEG00000001051	ssb	100	55.012	Poecilia_mexicana
ENSLACG00000014056	SSB	92	56.201	ENSPREG00000003708	ssb	96	56.522	Poecilia_reticulata
ENSLACG00000014056	SSB	99	69.853	ENSPPYG00000012919	SSB	99	67.076	Pongo_abelii
ENSLACG00000014056	SSB	94	65.714	ENSPCAG00000010276	SSB	99	65.195	Procavia_capensis
ENSLACG00000014056	SSB	99	60.049	ENSPCOG00000023189	-	99	57.248	Propithecus_coquereli
ENSLACG00000014056	SSB	99	66.667	ENSPCOG00000015741	-	99	64.128	Propithecus_coquereli
ENSLACG00000014056	SSB	85	71.182	ENSPVAG00000006615	SSB	97	71.345	Pteropus_vampyrus
ENSLACG00000014056	SSB	98	53.367	ENSPNYG00000006444	ssb	99	53.865	Pundamilia_nyererei
ENSLACG00000014056	SSB	97	56.468	ENSPNAG00000011708	ssb	99	56.468	Pygocentrus_nattereri
ENSLACG00000014056	SSB	99	61.463	ENSRNOG00000011606	AABR07061825.1	99	60.732	Rattus_norvegicus
ENSLACG00000014056	SSB	99	60.757	ENSRNOG00000007998	Ssb	99	60.284	Rattus_norvegicus
ENSLACG00000014056	SSB	93	59.948	ENSRBIG00000041232	-	98	56.955	Rhinopithecus_bieti
ENSLACG00000014056	SSB	99	59.322	ENSRBIG00000041972	SSB	100	64.748	Rhinopithecus_bieti
ENSLACG00000014056	SSB	99	49.265	ENSRBIG00000029918	-	99	46.683	Rhinopithecus_bieti
ENSLACG00000014056	SSB	89	62.466	ENSRBIG00000041608	-	98	59.890	Rhinopithecus_bieti
ENSLACG00000014056	SSB	97	63.275	ENSRROG00000034102	-	97	60.250	Rhinopithecus_roxellana
ENSLACG00000014056	SSB	99	57.457	ENSRROG00000007149	-	99	54.902	Rhinopithecus_roxellana
ENSLACG00000014056	SSB	99	69.853	ENSRROG00000040346	SSB	99	67.076	Rhinopithecus_roxellana
ENSLACG00000014056	SSB	97	60.902	ENSRROG00000031684	-	99	58.040	Rhinopithecus_roxellana
ENSLACG00000014056	SSB	99	70.098	ENSSBOG00000027204	SSB	99	67.322	Saimiri_boliviensis_boliviensis
ENSLACG00000014056	SSB	99	68.627	ENSSHAG00000018062	SSB	99	67.476	Sarcophilus_harrisii
ENSLACG00000014056	SSB	99	61.594	ENSSFOG00015000550	ssb	100	61.017	Scleropages_formosus
ENSLACG00000014056	SSB	98	53.000	ENSSMAG00000013885	ssb	97	57.300	Scophthalmus_maximus
ENSLACG00000014056	SSB	99	55.746	ENSSDUG00000020117	ssb	100	55.257	Seriola_dumerili
ENSLACG00000014056	SSB	99	54.187	ENSSLDG00000002525	ssb	100	53.695	Seriola_lalandi_dorsalis
ENSLACG00000014056	SSB	94	62.338	ENSSARG00000007747	SSB	99	61.818	Sorex_araneus
ENSLACG00000014056	SSB	99	67.813	ENSSPUG00000012112	SSB	99	69.042	Sphenodon_punctatus
ENSLACG00000014056	SSB	98	54.839	ENSSPAG00000005696	ssb	99	55.087	Stegastes_partitus
ENSLACG00000014056	SSB	89	63.462	ENSSSCG00000015938	SSB	91	63.462	Sus_scrofa
ENSLACG00000014056	SSB	99	67.892	ENSTGUG00000007942	SSB	99	69.118	Taeniopygia_guttata
ENSLACG00000014056	SSB	99	54.634	ENSTRUG00000017839	ssb	100	54.054	Takifugu_rubripes
ENSLACG00000014056	SSB	89	55.707	ENSTNIG00000000915	ssb	91	58.410	Tetraodon_nigroviridis
ENSLACG00000014056	SSB	81	73.913	ENSTBEG00000009056	SSB	81	73.913	Tupaia_belangeri
ENSLACG00000014056	SSB	99	68.704	ENSTTRG00000002152	SSB	99	66.176	Tursiops_truncatus
ENSLACG00000014056	SSB	90	70.811	ENSUAMG00000027833	SSB	96	68.132	Ursus_americanus
ENSLACG00000014056	SSB	99	68.704	ENSUMAG00000013907	SSB	99	65.196	Ursus_maritimus
ENSLACG00000014056	SSB	99	68.627	ENSVPAG00000007183	SSB	99	66.339	Vicugna_pacos
ENSLACG00000014056	SSB	99	69.193	ENSVVUG00000016573	SSB	77	66.912	Vulpes_vulpes
ENSLACG00000014056	SSB	99	57.075	ENSXETG00000025402	ssb	99	57.075	Xenopus_tropicalis
ENSLACG00000014056	SSB	92	53.439	ENSXCOG00000019109	ssb	84	66.087	Xiphophorus_couchianus
ENSLACG00000014056	SSB	99	53.790	ENSXMAG00000004888	ssb	100	53.790	Xiphophorus_maculatus